Abstract
Agroinfiltration assay using green fluorescent protein (GFP)-expressing Nicotiana benthamiana line 16c is a powerful method for screening of putative plant virus-encoded gene silencing suppressors. This method allows the investigator to know whether the putative viral suppressor inhibits silencing in a cell (local silencing) and/or spreading of silencing throughout a plant (systemic silencing). Additionally, grafting experiments using transgenic plants expressing the suppressor and the GFP will indicate whether the suppressor blocks systemic silencing steps, which include the production of a silencing signal in a silenced cell, and the cell-to-cell and long-distance movement of a silencing signal throughout a plant. Here, we describe methods and techniques of an agroinfiltration assay and grafting experiments, which were used for the characterization of Apple chlorotic leaf spot virus 50 kDa movement protein as a gene silencing suppressor. This protocol should allow the investigator to characterize putative plant virus-encoded gene silencing suppressors.
This is a preview of subscription content, log in via an institution.
Buying options
Tax calculation will be finalised at checkout
Purchases are for personal use only
Learn about institutional subscriptionsReferences
Cogoni C (2001) Homology-dependent gene silencing mechanisms in fungi. Annu Rev Microbiol 55:381–406
Hannon GJ (2002) RNA interference. Nature 418:244–251
Zamore PD (2002) Ancient pathways programmed by small RNAs. Science 296:1265–1269
Voinnet O (2005) Induction and suppression of RNA silencing: insights from viral infections. Nat Rev Genet 6:206–220
Wang MB, Metzlaff M (2005) RNA silencing and antiviral defense in plants. Curr Opin Plant Biol 8:216–222
Palauqui JC, Elmayan T, Pollien JM, Vaucheret H (1997) Systemic acquired silencing: transgene-specific posttranscriptional silencing is transmitted by grafting from silenced stocks to non-silenced scions. EMBO J 16:4738–4745
Voinnet O, Baulcombe DC (1997) Systemic signalling in gene silencing. Nature 389:553
Mlotshwa S, Voinnet O, Mette MF, Matzke M, Vaucheret H, Ding SW, Pruss G, Vance VB (2002) RNA silencing and the mobile silencing signal. Plant Cell 14(Suppl):S289–S301
Voinnet O (2005) Non-cell autonomous RNA silencing. FEBS Lett 26:5858–5871
Roth BM, Pruss GJ, Vance VB (2004) Plant viral suppressors of RNA silencing. Virus Res 102:97–108
Guo HS, Ding SW (2002) A viral protein inhibits the long range signaling activity of the gene silencing signal. EMBO J 21:398–407
Lakatos L, Szittya G, Silhavy D, Burgyan J (2004) Molecular mechanism of RNA silencing suppression mediated by p19 protein of tombusviruses. EMBO J 23:876–84
Mallory AC, Ely L, Smith TH, Marathe R, Anandalakshmi R, Fagard M, Vaucheret H, Pruss G, Bowman L, Vance VB (2001) HC-Pro suppression of transgene silencing eliminates the small RNAs but not transgene methylation or the mobile signal. Plant Cell 13:571–583
Mallory AC, Mlotshwa S, Bowman LH, Vance VB (2003) The capacity of transgenic tobacco to send a systemic RNA silencing signal depends on the nature of the inducing transgene locus. Plant J 35:82–92
Lu R, Folimonov A, Shintaku M, Li WX, Falk BW, Dawson WO, Ding S-W (2004) Three distinct suppressors of RNA silencing encoded by a 20-kb viral RNA genome. Proc Natl Acad Sci U S A 101:15742–15747
Yaegashi H, Takahashi T, Isogai M, Kobori T, Ohki S, Yoshikawa N (2007) Apple chlorotic leaf spot virus 50 kDa movement protein acts as a suppressor of systemic silencing without interfering with local silencing in Nicotiana benthamiana. J Gen Virol 88:316–324
Yaegashi H, Yamatsuta T, Takahashi T, Li C, Isogai M, Kobori T, Ohki S, Yoshikawa N (2007) Characterization of virus-induced gene silencing in tobacco plants infected with Apple latent spherical virus. Arch Virol 152:1839–1849
Yaegashi H, Tamura A, Isogai M, Yoshikawa N (2008) Inhibition of long-distance movement of RNA silencing signals in Nicotiana benthamiana by Apple chlorotic leaf spot virus 50 kDa movement protein. Virology 382:199–206
Brigneti G, Voinnet O, Li WX, Ji LH, Ding SW, Baulcombe DC (1998) Viral pathogenicity determinants are suppressors of transgene silencing in Nicotiana benthamiana. EMBO J 17:6739–6746
Llave C, Kasschau KD, Carrington JC (2000) Virus-encoded suppressor of posttranscriptional gene silencing targets a maintenance step in the silencing pathway. Proc Natl Acad Sci U S A 97:13401–13406
Voinnet O, Lederer C, Baulcombe DC (2000) A viral movement protein prevents spread of the gene silencing signal in Nicotiana benthamiana. Cell 103:157–167
Acknowledgments
We thank Dr. David C. Baulcombe, Sainsbury Laboratory, Norwich, UK for providing the GFP-expressing transgenic N. benthamiana line 16c, and Prof. Masato Ikegami, Tohoku University, Miyagi, Japan for providing pBI-GFP and pBI-dsGFP. This work was supported in part by a grant-in-aid for the 21st Century Center of Excellence Program from the Ministry of Education, Culture, Sports, Science and Technology of Japan.
Author information
Authors and Affiliations
Corresponding author
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2012 Springer Science+Business Media, LLC
About this protocol
Cite this protocol
Yaegashi, H., Isogai, M., Yoshikawa, N. (2012). Characterization of Plant Virus-Encoded Gene Silencing Suppressors. In: Watson, J., Wang, MB. (eds) Antiviral Resistance in Plants. Methods in Molecular Biology, vol 894. Humana Press, Totowa, NJ. https://doi.org/10.1007/978-1-61779-882-5_8
Download citation
DOI: https://doi.org/10.1007/978-1-61779-882-5_8
Published:
Publisher Name: Humana Press, Totowa, NJ
Print ISBN: 978-1-61779-881-8
Online ISBN: 978-1-61779-882-5
eBook Packages: Springer Protocols