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Ultrasensitive Hybridization-Based ELISA Method for the Determination of Phosphorodiamidate Morpholino Oligonucleotides in Biological samples

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Part of the book series: Methods in Molecular Biology ((MIMB,volume 1565))

Abstract

Determining the concentration of oligonucleotide in biological samples such as tissue lysate and serum is essential for determining the biodistribution and pharmacokinetic profile, respectively. ELISA-based assays have shown far greater sensitivities compared to other methods such as HPLC and LC/MS. Here, we describe a novel ultrasensitive hybridization-based ELISA method for quantitating morpholino oligonucleotides in mouse tissue lysate and serum samples. The assay has a linear detection range of 5–250 pM (R2 > 0.99).

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References

  1. Wei X, Dai G, Marcucci G, Liu Z, Hoyt D, Blum W, Chan KK (2006) A specific picomolar hybridization-based ELISA assay for the determination of phosphorothioate oligonucleotides in plasma and cellular matrices. Pharm Res 23(6):1251–1264. doi:10.1007/s11095-006-0082-3

    Article  CAS  PubMed  Google Scholar 

  2. Yu RZ, Baker B, Chappell A, Geary RS, Cheung E, Levin AA (2002) Development of an ultrasensitive noncompetitive hybridization-ligation enzyme-linked immunosorbent assay for the determination of phosphorothioate oligodeoxynucleotide in plasma. Anal Biochem 304(1):19–25. doi:10.1006/abio.2002.5576 S0003269702955764 [pii]

    Article  CAS  PubMed  Google Scholar 

  3. Goemans NM, Tulinius M, van den Akker JT, Burm BE, Ekhart PF, Heuvelmans N, Holling T, Janson AA, Platenburg GJ, Sipkens JA, Sitsen JM, Aartsma-Rus A, van Ommen GJ, Buyse G, Darin N, Verschuuren JJ, Campion GV, de Kimpe SJ, van Deutekom JC (2011) Systemic administration of PRO051 in Duchenne's muscular dystrophy. N Engl J Med 364(16):1513–1522. doi:10.1056/NEJMoa1011367

    Article  CAS  PubMed  Google Scholar 

  4. Heemskerk HA, de Winter CL, de Kimpe SJ, van Kuik-Romeijn P, Heuvelmans N, Platenburg GJ, van Ommen GJ, van Deutekom JC, Aartsma-Rus A (2009) In vivo comparison of 2'-O-methyl phosphorothioate and morpholino antisense oligonucleotides for Duchenne muscular dystrophy exon skipping. J Gene Med 11(3):257–266. doi:10.1002/jgm.1288

    Article  CAS  PubMed  Google Scholar 

  5. Verhaart IE, Tanganyika-de Winter CL, Karnaoukh TG, Kolfschoten IG, de Kimpe SJ, van Deutekom JC, Aartsma-Rus A (2013) Dose-dependent pharmacokinetic profiles of 2'-O-methyl phosphorothioate antisense oligonucleotidesin mdx mice. Nucleic Acid Ther 23(3):228–237. doi:10.1089/nat.2012.0398

    Article  CAS  PubMed  Google Scholar 

  6. Verhaart IE, van Vliet-van den Dool L, Sipkens JA, de Kimpe SJ, Kolfschoten IG, van Deutekom JC, Liefaard L, Ridings JE, Hood SR, Aartsma-Rus A (2014) The dynamics of compound, transcript, and protein effects after treatment with 2OMePS antisense oligonucleotides in mdx mice. Mol Ther Nucleic Acids 3:e148. doi:10.1038/mtna.2014.1 mtna20141 [pii]

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  7. Burki U, Keane J, Blain A, O'Donovan L, Gait MJ, Laval SH, Straub V (2015) Development and application of an ultrasensitive hybridization-based ELISA method for the determination of peptide-conjugated phosphorodiamidate morpholino oligonucleotides. Nucleic Acid Ther 25(5):275–284. doi:10.1089/nat.2014.0528

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  8. Betts C, Saleh AF, Arzumanov AA, Hammond SM, Godfrey C, Coursindel T, Gait MJ, Wood MJ (2012) Pip6-PMO, A new generation of peptide-oligonucleotide conjugates with improved cardiac exon skipping activity for DMD treatment. Mol Ther Nucleic Acids 1:e38. doi:10.1038/mtna.2012.30 mtna201230 [pii]

    Article  PubMed  PubMed Central  Google Scholar 

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Acknowledgements

We acknowledge the support of Sylvia Aitken Charitable Trust in funding this work and Michael John Gait for kindly providing the P-PMO.

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Correspondence to Volker Straub .

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Burki, U., Straub, V. (2017). Ultrasensitive Hybridization-Based ELISA Method for the Determination of Phosphorodiamidate Morpholino Oligonucleotides in Biological samples. In: Moulton, H., Moulton, J. (eds) Morpholino Oligomers. Methods in Molecular Biology, vol 1565. Humana Press, New York, NY. https://doi.org/10.1007/978-1-4939-6817-6_22

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  • DOI: https://doi.org/10.1007/978-1-4939-6817-6_22

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  • Publisher Name: Humana Press, New York, NY

  • Print ISBN: 978-1-4939-6815-2

  • Online ISBN: 978-1-4939-6817-6

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