Skip to main content

DNA-Directed Self-Assembly of Highly Ordered and Dense Single-Walled Carbon Nanotube Arrays

  • Protocol
  • First Online:

Part of the book series: Methods in Molecular Biology ((MIMB,volume 1500))

Abstract

Single-walled carbon nanotubes (SWNT or CNT) have unique and well-known high-performance material properties that can enable revolutionary increases in the performance of electronic devices and architectures. However, fabrication of large-scale SWNT-based ICs is an enormously challenging, unsolved problem, and self-assembly is likely needed for critical steps. Over the past several years, methods have been introduced to created ordered carbon nanotube structures using DNA guided self-assembly. In this chapter, we briefly review the challenges involved in using DNA to assemble SWNT nanostructures, and then give detailed methods to assemble dense, aligned SWNT arrays. In particular, we discuss the preparation of DNA wrapped single-walled nanotubes (DNA-CNTs) using commercial carbon nanotube products that are suitable for electronics applications. Then, we discuss methods to characterize DNA-CNTs using fluid mode atomic force microscopy (AFM). Finally, we give detailed procedures for assembly of DNA-CNTs into dense parallel arrays via linker induced surface assembly (LISA).

This is a preview of subscription content, log in via an institution.

Buying options

Protocol
USD   49.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD   89.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD   119.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD   169.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Learn about institutional subscriptions

Springer Nature is developing a new tool to find and evaluate Protocols. Learn more

References

  1. Avouris P (2009) Carbon nanotube electronics and photonics. Phys Today 62(1):34–40

    Article  CAS  Google Scholar 

  2. Pfeiffer R, Pichler T, Kim YA, Kuzmany H (2008) Double-wall carbon nanotubes. In: Jorio A, Dresselhaus G, Dresselhaus MS (eds) Carbon nanotubes: advanced topics in the synthesis, structure, properties and applications. Springer, Heidelberg, Berlin, pp 495–530

    Google Scholar 

  3. Tulevski GS, Franklin AD, Frank D, Lobez JM, Cao Q, Park H, Afzali A, Han S-J, Hannon JB, Haensch W (2014) Toward high-performance digital logic technology with carbon nanotubes. ACS Nano 8(9):8730–8745

    Article  CAS  PubMed  Google Scholar 

  4. Zheng M, Jagota A, Strano MS, Santos AP, Barone P, Chou SG, Diner BA, Dresselhaus MS, Mclean RS, Onoa GB, Samsonidze GG, Semke ED, Usrey M, Walls DJ (2003) Structure-based carbon nanotube sorting by sequence-dependent DNA assembly. Science 302(5650):1545–1548. doi:10.1126/science

    Article  CAS  PubMed  Google Scholar 

  5. Maeda Y, Matsui H (2012) Genetically engineered protein nanowires: unique features in site-specific functionalization and multi-dimensional self-assembly. Soft Matter 8(29):7533–7544

    Article  CAS  Google Scholar 

  6. Qun G, Chuanding C, Ravikanth G, Shivashankar S, Sathish A, Kun D, Donald TH (2006) DNA nanowire fabrication. Nanotechnology 17(1):R14

    Article  Google Scholar 

  7. Willner I, Willner B (2001) Biomaterials integrated with electronic elements: en route to bioelectronics. Trends Biotechnol 19(6):222–230

    Article  CAS  PubMed  Google Scholar 

  8. Maune HT, S-p H, Barish RD, Bockrath M, Goddard IIA, RothemundPaul WK, Winfree E (2010) Self-assembly of carbon nanotubes into two-dimensional geometries using DNA origami templates. Nat Nano 5(1):61–66

    Article  CAS  Google Scholar 

  9. Fink H-W, Schonenberger C (1999) Electrical conduction through DNA molecules. Nature 398(6726):407–410

    Article  CAS  PubMed  Google Scholar 

  10. Surwade SP, Zhou F, Wei B, Sun W, Powell A, O’Donnell C, Yin P, Liu H (2013) Nanoscale growth and patterning of inorganic oxides using DNA nanostructure templates. J Am Chem Soc 135(18):6778–6781

    Article  CAS  PubMed  Google Scholar 

  11. Jones MR, Seeman NC, Mirkin CA (2015) Programmable materials and the nature of the DNA bond. Science 347(6224)

    Google Scholar 

  12. Han S-P, Maune HT, Barish RD, Bockrath M, Goddard WA (2012) DNA-linker-induced surface assembly of ultra dense parallel single walled carbon nanotube arrays. Nano Lett 12(3):1129–1135

    Article  CAS  PubMed  Google Scholar 

  13. Woo S, Rothemund PWK (2014) Self-assembly of two-dimensional DNA origami lattices using cation-controlled surface diffusion. Nat Commun 5:4889

    Article  CAS  PubMed  Google Scholar 

  14. Pastré D, Piétrement O, Fusil S, Landousy F, Jeusset J, David M-O, Hamon L, Le Cam E, Zozime A (2003) Adsorption of DNA to mica mediated by divalent counterions: a theoretical and experimental study. Biophys J 85(4):2507–2518

    Article  PubMed  PubMed Central  Google Scholar 

  15. Zheng M, Jagota A, Semke ED, Diner BA, McLean RS, Lustig SR, Richardson RE, Tassi NG (2003) DNA-assisted dispersion and separation of carbon nanotubes. Nat Mater 2(5):338–342

    Article  CAS  PubMed  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Hareem Maune .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2017 Springer Science+Business Media New York

About this protocol

Cite this protocol

Maune, H., Han, Sp. (2017). DNA-Directed Self-Assembly of Highly Ordered and Dense Single-Walled Carbon Nanotube Arrays. In: Ke, Y., Wang, P. (eds) 3D DNA Nanostructure. Methods in Molecular Biology, vol 1500. Humana Press, New York, NY. https://doi.org/10.1007/978-1-4939-6454-3_17

Download citation

  • DOI: https://doi.org/10.1007/978-1-4939-6454-3_17

  • Published:

  • Publisher Name: Humana Press, New York, NY

  • Print ISBN: 978-1-4939-6452-9

  • Online ISBN: 978-1-4939-6454-3

  • eBook Packages: Springer Protocols

Publish with us

Policies and ethics