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  • © 2014

Regulatory Nascent Polypeptides

Editors:

  • Highlights an emerging paradigm: proteins can function during their biosynthesis

  • Is the first book to focus on hitherto unpredicted functions of nascent chains

  • Explains how dynamic translation processes uncover secrets of gene regulation

  • Includes supplementary material: sn.pub/extras

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Table of contents (17 chapters)

  1. Front Matter

    Pages i-ix
  2. Introduction

    1. Front Matter

      Pages 1-1
  3. The Ribosome and the Exit Tunnel

    1. Front Matter

      Pages 21-21
    2. Nascent Peptide-Induced Signaling from the Exit Tunnel to the Outside of the Ribosome

      • Thomas Bornemann, Wolf Holtkamp, Wolfgang Wintermeyer
      Pages 87-97
    3. Ribosome Stalling at Diprolyl Motifs Is Alleviated by Elongation Factor P

      • Agata L. Starosta, Daniel N. Wilson
      Pages 99-116
  4. Emerging Experimental Approaches

    1. Front Matter

      Pages 117-117
  5. Regulatory Nascent Chains Sensing Metabolites and Drugs

    1. Front Matter

      Pages 149-149
    2. Translation Elongation Arrest Induced by S-Adenosyl-l-Methionine-Sensing Nascent Peptide in Plants

      • Yui Yamashita, Noriyuki Onoue, Katsunori Murota, Hitoshi Onouchi, Satoshi Naito
      Pages 187-201
    3. Co-translational Polyamine Sensing by Nascent ODC Antizyme

      • R. Palanimurugan, Leo Kurian, Vishal Hegde, Kay Hofmann, R. Jürgen Dohmen
      Pages 203-222
  6. Elongation-Arresting Nascent Chains and Translocation Sensing

    1. Front Matter

      Pages 223-223
    2. Isolation of Ribosome Stalling Motifs from Random Libraries

      • Christopher J. Woolstenhulme, Allen R. Buskirk
      Pages 225-240

About this book

This book highlights a new paradigm of translation control by regulatory nascent polypeptides, which is integrated into cellular regulatory systems. Translation lies in the hub of the central dogma of biology, in which the genetic information in the forms of 4-letter sentences is translated into 20-letter sentences: sequences of amino acids that constitute proteins, the functional molecules of life. The process involves a huge number of chemical reactions as well as physical movements of the ribosome along a messenger RNA and takes, on average, tens of seconds in prokaryotes and a few minutes in eukaryotes. Detailed knowledge about the progression of translation, called "elongation", only recently started to accumulate. Newly synthesized and growing polypeptides, called nascent polypeptides, can interact with the intra-ribosomal conduit, called the ribosomal exit tunnel, when they have some specific amino acid sequences, called "an arrest sequence". Such interaction leads to a halt in the elongation reaction. Resulting stalling of the ribosome on messenger RNA can affect the secondary structure and/or localization of the message in the cell, consequently leading to biological outputs such as elevation or reduction of a gene product. This book provides a first collection of knowledge focused on regulatory nascent polypeptides, which have been studied recently using diverse organisms including bacteria, plants, and animals. Readers will be impressed by a new paradigm showing that proteins can function even during the course of their biosynthesis and that the ribosome, the "factory" of protein production, interacts with and inspects its products to adjust the speed of completion of each product. Moreover, regulatory nascent polypeptides can sense or monitor physiological states of the cell and modulate its ability to arrest translation. Living organisms use such intricate control mechanisms of translational speed to regulate gene expression. This book will be a useful addition for established scientists while inspiring students and young scientists to gain deeper insights into the processes of expression of genetic information.

Editors and Affiliations

  • Kyoto Sangyo University, Kita-ku, Japan

    Koreaki Ito

About the editor

Koreaki Ito, Senior Research Fellow, Kyoto Sangyo University

Bibliographic Information

  • Book Title: Regulatory Nascent Polypeptides

  • Editors: Koreaki Ito

  • DOI: https://doi.org/10.1007/978-4-431-55052-5

  • Publisher: Springer Tokyo

  • eBook Packages: Biomedical and Life Sciences, Biomedical and Life Sciences (R0)

  • Copyright Information: Springer Japan 2014

  • Hardcover ISBN: 978-4-431-55051-8Published: 01 September 2014

  • Softcover ISBN: 978-4-431-56113-2Published: 23 August 2016

  • eBook ISBN: 978-4-431-55052-5Published: 19 August 2014

  • Edition Number: 1

  • Number of Pages: IX, 315

  • Number of Illustrations: 13 b/w illustrations, 62 illustrations in colour

  • Topics: Biochemistry, general, Cell Biology, Human Genetics, Gene Expression

Buy it now

Buying options

eBook USD 129.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book USD 169.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book USD 169.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Other ways to access