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  • Book
  • © 2011

Strain Engineering

Methods and Protocols

  • Includes cutting-edge methods and protocols
  • Provides step-by-step detail essential for reproducible results
  • Contains key notes and implementation advice from the experts
  • Includes supplementary material: sn.pub/extras

Part of the book series: Methods in Molecular Biology (MIMB, volume 765)

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Table of contents (29 protocols)

  1. Front Matter

    Pages i-xi
  2. E. coli

    1. Front Matter

      Pages 1-1
    2. Bacterial Genome Reengineering

      • Jindan Zhou, Kenneth E. Rudd
      Pages 3-25
    3. Scarless Chromosomal Gene Knockout Methods

      • Bong Hyun Sung, Jun Hyoung Lee, Sun Chang Kim
      Pages 43-54
    4. Genome Engineering Using Targeted Oligonucleotide Libraries and Functional Selection

      • Elie J. Diner, Fernando Garza-Sánchez, Christopher S. Hayes
      Pages 71-82
    5. Marker-Free Chromosomal Expression of Foreign and Native Genes in Escherichia coli

      • Chung-Jen Chiang, Po Ting Chen, Shan-Yu Chen, Yun-Peng Chao
      Pages 113-123
    6. Array-Based Synthetic Genetic Screens to Map Bacterial Pathways and Functional Networks in Escherichia coli

      • Mohan Babu, Alla Gagarinova, Jack Greenblatt, Andrew Emili
      Pages 125-153
  3. Strain Engineering Other Industrially Important Microbes

    1. Front Matter

      Pages 295-295

About this book

Classical methods for microbial strain engineering, used to improve the production of bioproducts, have serious drawbacks and have been found to be unsuitable for complex strain development applications. In Strain Engineering: Methods and Protocols, powerful new genetic engineering-based strain engineering methods are presented for rational modification of a variety of model organisms. These methods are particularly powerful when utilized to manipulate microbes for which sequenced and annotated genomes are available. Collectively, these methods systematically introduce genome alterations in a precise manner, allowing the creation of novel strains carrying only desired genome alterations. In the first section, E. coli-based bacterial strain engineering strategies are reviewed, while the second section presents analogous microbial engineering strategies for eukaryotic cells using the yeast Saccharomyces cerevisiae as a model. The third section covers examples of the proliferative adaptations of these base technologies to strain engineer industrially important prokaryotic or eukaryotic microbial systems. Written in the highly successful Methods in Molecular Biologyâ„¢ series format, chapters contain introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and notes on troubleshooting and avoiding known pitfalls.

 

Authoritative and accessible, Strain Engineering: Methods and Protocols serves as an ideal guide to scientists in academia, pharmaceutical science, and biotechnology who perform microbial strain engineering.

Editors and Affiliations

  • Nature Technology Corporation, Lincoln, USA

    James A. Williams

Bibliographic Information

  • Book Title: Strain Engineering

  • Book Subtitle: Methods and Protocols

  • Editors: James A. Williams

  • Series Title: Methods in Molecular Biology

  • DOI: https://doi.org/10.1007/978-1-61779-197-0

  • Publisher: Humana Totowa, NJ

  • eBook Packages: Springer Protocols

  • Copyright Information: Springer Science+Business Media, LLC 2011

  • Hardcover ISBN: 978-1-61779-196-3Published: 15 July 2011

  • Softcover ISBN: 978-1-4939-5846-7Published: 23 August 2016

  • eBook ISBN: 978-1-61779-197-0Published: 15 July 2011

  • Series ISSN: 1064-3745

  • Series E-ISSN: 1940-6029

  • Edition Number: 1

  • Number of Pages: XI, 480

  • Number of Illustrations: 81 b/w illustrations, 2 illustrations in colour

  • Topics: Human Genetics, Genetic Engineering

Buy it now

Buying options

eBook USD 89.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book USD 119.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book USD 169.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Other ways to access