Normalization of Illumina Infinium whole-genome SNP data improves copy number estimates and allelic intensity ratios
Authors (first, second and last of 8)
Volume 9, issue 1, December 2008
559 articles in this issue
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BibGlimpse: The case for a light-weight reprint manager in distributed literature research
Authors (first, second and last of 4)
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Integrative bioinformatics analysis of transcriptional regulatory programs in breast cancer cells
Authors (first, second and last of 7)
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MetaMQAP: A meta-server for the quality assessment of protein models
Authors (first, second and last of 4)
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Abbreviation definition identification based on automatic precision estimates
Authors (first, second and last of 4)
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Building blocks for automated elucidation of metabolites: Machine learning methods for NMR prediction
Authors (first, second and last of 4)
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Modifying the DPClus algorithm for identifying protein complexes based on new topological structures
Authors (first, second and last of 5)
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Predicting protein linkages in bacteria: Which method is best depends on task
Authors (first, second and last of 4)
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FAF-Drugs2: Free ADME/tox filtering tool to assist drug discovery and chemical biology projects
Authors (first, second and last of 5)
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Comparison study on k-word statistical measures for protein: From sequence to 'sequence space'
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Combining classifiers for improved classification of proteins from sequence or structure
Authors (first, second and last of 4)
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Sequence based residue depth prediction using evolutionary information and predicted secondary structure
Authors (first, second and last of 6)
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"TOF2H": A precision toolbox for rapid, high density/high coverage hydrogen-deuterium exchange mass spectrometry via an LC-MALDI approach, covering the data pipeline from spectral acquisition to HDX rate analysis
Authors (first, second and last of 5)
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The metagenomics RAST server – a public resource for the automatic phylogenetic and functional analysis of metagenomes
Authors (first, second and last of 12)
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GlycomeDB – integration of open-access carbohydrate structure databases
Authors (first, second and last of 4)
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caBIG™ VISDA: Modeling, visualization, and discovery for cluster analysis of genomic data
Authors (first, second and last of 8)
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A probabilistic framework to predict protein function from interaction data integrated with semantic knowledge
Authors (first, second and last of 4)
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MiMiR – an integrated platform for microarray data sharing, mining and analysis
Authors (first, second and last of 15)
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GenomeMatcher: A graphical user interface for DNA sequence comparison
Authors (first, second and last of 4)
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Critical assessment of alignment procedures for LC-MS proteomics and metabolomics measurements
Authors (first, second and last of 4)
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Large-scale identification of polymorphic microsatellites using an in silico approach
Authors (first, second and last of 8)
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Computational detection of significant variation in binding affinity across two sets of sequences with application to the analysis of replication origins in yeast
Authors (first, second and last of 7)
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Kismeth: Analyzer of plant methylation states through bisulfite sequencing
Authors (first, second and last of 6)
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Automatic detection of exonic splicing enhancers (ESEs) using SVMs
Authors (first, second and last of 4)
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LOMA: A fast method to generate efficient tagged-random primers despite amplification bias of random PCR on pathogens
Authors (first, second and last of 5)
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ReRep: Computational detection of repetitive sequences in genome survey sequences (GSS)
Authors (first, second and last of 5)
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Model-based clustering of DNA methylation array data: a recursive-partitioning algorithm for high-dimensional data arising as a mixture of beta distributions
Authors (first, second and last of 11)
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Fregene: Simulation of realistic sequence-level data in populations and ascertained samples
Authors (first, second and last of 6)
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Virtual screening of GPCRs: An in silico chemogenomics approach
Authors (first, second and last of 4)
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Combining Shapley value and statistics to the analysis of gene expression data in children exposed to air pollution
Authors (first, second and last of 8)
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