Volume 55, issue 1, December 2023
95 articles in this issue
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Natural clines and human management impact the genetic structure of Algerian honey bee populations
Authors (first, second and last of 11)
- Giovanna Salvatore
- Amira Chibani Bahi Amar
- Pierre Faux
- Content type: Research Article
- Open Access
- Published: 19 December 2023
- Article: 94
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Genotype-by-environment interactions for feed efficiency traits in Nellore cattle based on bi-trait reaction norm models
Authors (first, second and last of 7)
- João B. Silva Neto
- Lucio F. M. Mota
- Fernando Baldi
- Content type: Research Article
- Open Access
- Published: 14 December 2023
- Article: 93
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Managing genomic diversity in conservation programs of Chinese domestic chickens
Authors (first, second and last of 9)
- Mengmeng Zhang
- Shiwei Wang
- Keliang Wu
- Content type: Research Article
- Open Access
- Published: 14 December 2023
- Article: 92
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Mapping restricted introgression across the genomes of admixed indigenous African cattle breeds
Authors (first, second and last of 13)
- Juliane Friedrich
- Richard I. Bailey
- Pamela Wiener
- Content type: Research Article
- Open Access
- Published: 14 December 2023
- Article: 91
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Genetic analysis of the blood transcriptome of young healthy pigs to improve disease resilience
Authors (first, second and last of 9)
- Kyu-Sang Lim
- Jian Cheng
- Jack Dekkers
- Content type: Research Article
- Open Access
- Published: 12 December 2023
- Article: 90
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The genetics of gaits in Icelandic horses goes beyond DMRT3, with RELN and STAU2 identified as two new candidate genes
Authors (first, second and last of 7)
- Heiðrún Sigurðardóttir
- Henrik Boije
- Susanne Eriksson
- Content type: Research Article
- Open Access
- Published: 11 December 2023
- Article: 89
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A meta-analysis of genetic and phenotypic diversity of European local pig breeds reveals genomic regions associated with breed differentiation for production traits
Authors (first, second and last of 24)
- Klavdija Poklukar
- Camille Mestre
- Bertrand Servin
- Content type: Research Article
- Open Access
- Published: 07 December 2023
- Article: 88
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Genetic parameters, reciprocal cross differences, and age-related heterosis of egg-laying performance in chickens
Authors (first, second and last of 7)
- Aixin Ni
- Mario P. L. Calus
- Jilan Chen
- Content type: Research Article
- Open Access
- Published: 07 December 2023
- Article: 87
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Impact of population structure in the estimation of recent historical effective population size by the software GONE
Authors (first, second and last of 6)
- Irene Novo
- Pilar Ordás
- Armando Caballero
- Content type: Research Article
- Open Access
- Published: 04 December 2023
- Article: 86
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Micro-genetic environmental sensitivity across macro-environments of chickens reared in Burkina Faso and France
Authors (first, second and last of 4)
- Mette Dam Madsen
- Naomi Duijvesteijn
- Sam Clark
- Content type: Research Article
- Open Access
- Published: 30 November 2023
- Article: 85
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Genetic correlations of direct and indirect genetic components of social dominance with fitness and morphology traits in cattle
Authors (first, second and last of 6)
- Beniamino Tuliozi
- Roberto Mantovani
- Cristina Sartori
- Content type: Research Article
- Open Access
- Published: 30 November 2023
- Article: 84
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Sequenced-based GWAS for linear classification traits in Belgian Blue beef cattle reveals new coding variants in genes regulating body size in mammals
Authors (first, second and last of 9)
- José Luis Gualdrón Duarte
- Can Yuan
- Tom Druet
- Content type: Research Article
- Open Access
- Published: 28 November 2023
- Article: 83
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Heterogeneity in convergence behaviour of the single-step SNP-BLUP model across different effects and animal groups
Authors
- Dawid SÅ‚omian
- Kacper Żukowski
- Joanna Szyda
- Content type: Research Article
- Open Access
- Published: 23 November 2023
- Article: 82
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Unravelling the genetic variability of host resilience to endo- and ectoparasites in Nellore commercial herds
Authors (first, second and last of 10)
- Gabriela Canabrava Gouveia
- VirgÃnia Mara Pereira Ribeiro
- Fabio Luiz Buranelo Toral
- Content type: Research Article
- Open Access
- Published: 21 November 2023
- Article: 81
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Defining valid breeding goals for animal breeds
Authors (first, second and last of 4)
- Robin Wellmann
- Nicolas Gengler
- Jens Tetens
- Content type: Research Article
- Open Access
- Published: 21 November 2023
- Article: 80
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Correction: Sequence-based GWAS meta-analyses for beef production traits
Authors (first, second and last of 16)
- Marie-Pierre Sanchez
- Thierry Tribout
- Didier Boichard
- Content type: Correction
- Open Access
- Published: 13 November 2023
- Article: 79
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Exploring the potential of incremental feature selection to improve genomic prediction accuracy
Authors (first, second and last of 6)
- Felix Heinrich
- Thomas Martin Lange
- Mehmet Gültas
- Content type: Research Article
- Open Access
- Published: 09 November 2023
- Article: 78
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Disentangling the dynamics of energy allocation to develop a proxy for robustness of fattening pigs
Authors (first, second and last of 5)
- Guillaume Lenoir
- Loïc Flatres-Grall
- Nicolas C. Friggens
- Content type: Research Article
- Open Access
- Published: 07 November 2023
- Article: 77
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Across-country genetic and genomic analyses of foot score traits in American and Australian Angus cattle
Authors (first, second and last of 7)
- Amanda B. Alvarenga
- Kelli J. Retallick
- Luiz F. Brito
- Content type: Research Article
- Open Access
- Published: 02 November 2023
- Article: 76
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Combined single-step evaluation of functional longevity of dairy cows including correlated traits
Authors (first, second and last of 5)
- Laure-Hélène Maugan
- Roberta Rostellato
- Vincent Ducrocq
- Content type: Research Article
- Open Access
- Published: 25 October 2023
- Article: 75
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Approaching autozygosity in a small pedigree of Gochu Asturcelta pigs
Authors (first, second and last of 5)
- Katherine D. Arias
- Juan Pablo Gutiérrez
- Félix Goyache
- Content type: Research Article
- Open Access
- Published: 25 October 2023
- Article: 74
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Comparative analyses of dynamic transcriptome profiles highlight key response genes and dominant isoforms for muscle development and growth in chicken
Authors (first, second and last of 17)
- Zhang Wang
- Weihua Tian
- Xiaojun Liu
- Content type: Research Article
- Open Access
- Published: 23 October 2023
- Article: 73
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Genomic prediction based on selective linkage disequilibrium pruning of low-coverage whole-genome sequence variants in a pure Duroc population
Authors (first, second and last of 8)
- Di Zhu
- Yiqiang Zhao
- Xiaoxiang Hu
- Content type: Research Article
- Open Access
- Published: 18 October 2023
- Article: 72
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Multi-breed genomic evaluation for tropical beef cattle when no pedigree information is available
Authors (first, second and last of 6)
- Ben J. Hayes
- James Copley
- Geoffry Fordyce
- Content type: Research Article
- Open Access
- Published: 16 October 2023
- Article: 71
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Sequence-based GWAS meta-analyses for beef production traits
Authors (first, second and last of 16)
- Marie-Pierre Sanchez
- Thierry Tribout
- Didier Boichard
- Content type: Research Article
- Open Access
- Published: 12 October 2023
- Article: 70
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The mRNA-lncRNA landscape of multiple tissues uncovers key regulators and molecular pathways that underlie heterosis for feed intake and efficiency in laying chickens
Authors (first, second and last of 11)
- Jingwei Yuan
- Jinmeng Zhao
- Jilan Chen
- Content type: Research Article
- Open Access
- Published: 06 October 2023
- Article: 69
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Interpreting single-step genomic evaluation as a neural network of three layers: pedigree, genotypes, and phenotypes
Authors
- Tianjing Zhao
- Hao Cheng
- Content type: Short communication
- Open Access
- Published: 03 October 2023
- Article: 68
This is part of 1 collection: -
Towards genetic improvement of social behaviours in livestock using large-scale sensor data: data simulation and genetic analysis
Authors
- Zhuoshi Wang
- Harmen Doekes
- Piter Bijma
- Content type: Research Article
- Open Access
- Published: 28 September 2023
- Article: 67
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An improved transmissibility model to detect transgenerational transmitted environmental effects
Authors
- Ingrid David
- Anne Ricard
- Content type: Research Article
- Open Access
- Published: 21 September 2023
- Article: 66
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Genetic parameters for automatically-measured vaginal temperature, respiration efficiency, and other thermotolerance indicators measured on lactating sows under heat stress conditions
Authors (first, second and last of 10)
- Pedro H. F. Freitas
- Jay S. Johnson
- Luiz F. Brito
- Content type: Research Article
- Open Access
- Published: 20 September 2023
- Article: 65
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Potential selection for lipid kinase activity and spermatogenesis in Henan native pig breeds and growth shaping by introgression of European genes
Authors (first, second and last of 10)
- Ruimin Qiao
- Xinjian Li
- Kui Li
- Content type: Research Article
- Open Access
- Published: 18 September 2023
- Article: 64
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Genetic analysis of geometric morphometric 3D visuals of French jumping horses
Authors (first, second and last of 7)
- Anne Ricard
- Nathalie Crevier-Denoix
- Sophie Danvy
- Content type: Research Article
- Open Access
- Published: 18 September 2023
- Article: 63
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Analysis of polygenic selection in purebred and crossbred pig genomes using generation proxy selection mapping
Authors (first, second and last of 6)
- Caleb J. Grohmann
- Caleb M. Shull
- Jared E. Decker
- Content type: Research Article
- Open Access
- Published: 14 September 2023
- Article: 62
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Metabolomic-genomic prediction can improve prediction accuracy of breeding values for malting quality traits in barley
Authors (first, second and last of 5)
- Xiangyu Guo
- Pernille Sarup
- Ole F. Christensen
- Content type: Research Article
- Open Access
- Published: 05 September 2023
- Article: 61
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Genetic characterisation of the Connemara pony and the Warmblood horse using a within-breed clustering approach
Authors (first, second and last of 6)
- Victoria Lindsay-McGee
- Enrique Sanchez-Molano
- Androniki Psifidi
- Content type: Research Article
- Open Access
- Published: 17 August 2023
- Article: 60
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Potential of low-density genotype imputation for cost-efficient genomic selection for resistance to Flavobacterium columnare in rainbow trout (Oncorhynchus mykiss)
Authors (first, second and last of 4)
- Clémence Fraslin
- Diego Robledo
- Ross D. Houston
- Content type: Research Article
- Open Access
- Published: 14 August 2023
- Article: 59
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Estimation and consequences of direct-maternal genetic and environmental covariances in models for genetic evaluation in broilers
Authors (first, second and last of 6)
- Hélène Romé
- Thinh T. Chu
- Just Jensen
- Content type: Research Article
- Open Access
- Published: 07 August 2023
- Article: 58
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Using residual regressions to quantify and map signal leakage in genomic prediction
Authors (first, second and last of 6)
- Bruno D. Valente
- Gustavo de los Campos
- William O. Herring
- Content type: Research Article
- Open Access
- Published: 07 August 2023
- Article: 57
This is part of 1 collection: -
deepGBLUP: joint deep learning networks and GBLUP framework for accurate genomic prediction of complex traits in Korean native cattle
Authors (first, second and last of 5)
- Hyo-Jun Lee
- Jun Heon Lee
- Seung Hwan Lee
- Content type: Research Article
- Open Access
- Published: 31 July 2023
- Article: 56
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Using pre-selected variants from large-scale whole-genome sequence data for single-step genomic predictions in pigs
Authors (first, second and last of 8)
- Sungbong Jang
- Roger Ros-Freixedes
- Daniela Lourenco
- Content type: Research Article
- Open Access
- Published: 26 July 2023
- Article: 55
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Selection for social genetic effects in purebred pigs improves behaviour and handling of their crossbred progeny
Authors (first, second and last of 6)
- Bjarne Nielsen
- Lizette Vestergaard Horndrup
- Birgitte Ask
- Content type: Research Article
- Open Access
- Published: 25 July 2023
- Article: 54
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Combining host and rumen metagenome profiling for selection in sheep: prediction of methane, feed efficiency, production, and health traits
Authors (first, second and last of 21)
- Melanie K. Hess
- Larissa Zetouni
- Suzanne J. Rowe
- Content type: Research Article
- Open Access
- Published: 25 July 2023
- Article: 53
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Using social interaction models for genetic analysis of skin damage in gilts
Authors (first, second and last of 6)
- Natália Galoro Leite
- Egbert Knol
- Daniela Lourenco
- Content type: Research Article
- Open Access
- Published: 24 July 2023
- Article: 52
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The WUR0000125 PRRS resilience SNP had no apparent effect on pigs’ infectivity and susceptibility in a novel transmission trial
Authors (first, second and last of 10)
- Margo Chase-Topping
- Graham Plastow
- Andrea Doeschl-Wilson
- Content type: Research Article
- Open Access
- Published: 24 July 2023
- Article: 51
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Taming transposable elements in livestock and poultry: a review of their roles and applications
Authors (first, second and last of 5)
- Pengju Zhao
- Chen Peng
- George E. Liu
- Content type: Review
- Open Access
- Published: 21 July 2023
- Article: 50
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Dimensionality of genomic information and its impact on genome-wide associations and variant selection for genomic prediction: a simulation study
Authors (first, second and last of 5)
- Sungbong Jang
- Shogo Tsuruta
- Daniela Lourenco
- Content type: Research Article
- Open Access
- Published: 17 July 2023
- Article: 49
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Impact of kinship matrices on genetic gain and inbreeding with optimum contribution selection in a genomic dairy cattle breeding program
Authors (first, second and last of 4)
- Egill Gautason
- Goutam Sahana
- Peer Berg
- Content type: Research Article
- Open Access
- Published: 17 July 2023
- Article: 48
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Cytogenetic screening of a Canadian swine breeding nucleus using a newly developed karyotyping method named oligo-banding
Authors (first, second and last of 6)
- William Poisson
- Alexandre Bastien
- Claude Robert
- Content type: Research Article
- Open Access
- Published: 10 July 2023
- Article: 47
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E-GWAS: an ensemble-like GWAS strategy that provides effective control over false positive rates without decreasing true positives
Authors (first, second and last of 9)
- Guang-Liang Zhou
- Fang-Jun Xu
- Meng-Jin Zhu
- Content type: Research Article
- Open Access
- Published: 05 July 2023
- Article: 46