Volume 54, issue 1, December 2022
82 articles in this issue
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Disentangling the causal relationship between rabbit growth and cecal microbiota through structural equation models
Authors (first, second and last of 5)
- Mónica Mora
- MarÃa Velasco-Galilea
- Miriam Piles
- Content type: Research Article
- Open Access
- Published: 19 December 2022
- Article: 81
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Application of mixed linear models for the estimation of functional effects on bovine stature based on SNP summary statistics from a whole-genome association study
Authors (first, second and last of 5)
- Krzysztof Kotlarz
- Barbara Kosinska-Selbi
- Joanna Szyda
- Content type: Short Communication
- Open Access
- Published: 16 December 2022
- Article: 80
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Genetic characteristics of colostrum refractive index and its use as a proxy for the concentration of immunoglobulins in Holstein cattle
Authors (first, second and last of 5)
- Angela Costa
- Giulio Visentin
- Mauro Penasa
- Content type: Research Article
- Open Access
- Published: 02 December 2022
- Article: 79
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Inference about quantitative traits under selection: a Bayesian revisitation for the post-genomic era
Authors
- Daniel Gianola
- Rohan L. Fernando
- Chris C. Schön
- Content type: Research Article
- Open Access
- Published: 02 December 2022
- Article: 78
This is part of 1 collection: -
Host genetic control on rumen microbiota and its impact on dairy traits in sheep
Authors (first, second and last of 4)
- Guillermo Martinez Boggio
- Annabelle Meynadier
- Christel Marie-Etancelin
- Content type: Research Article
- Open Access
- Published: 24 November 2022
- Article: 77
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Optimisation of the core subset for the APY approximation of genomic relationships
Authors (first, second and last of 5)
- Ivan Pocrnic
- Finn Lindgren
- Gregor Gorjanc
- Content type: Research Article
- Open Access
- Published: 22 November 2022
- Article: 76
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Cost-effectively dissecting the genetic architecture of complex wool traits in rabbits by low-coverage sequencing
Authors (first, second and last of 9)
- Dan Wang
- Kerui Xie
- Xinzhong Fan
- Content type: Research Article
- Open Access
- Published: 18 November 2022
- Article: 75
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Failing the four-gamete test enables exact phasing: the Corners’ Algorithm
Authors
- Luis Gomez-Raya
- Wendy M. Rauw
- Content type: Research Article
- Open Access
- Published: 14 November 2022
- Article: 74
This is part of 1 collection: -
Can breeders prevent pathogen adaptation when selecting for increased resistance to infectious diseases?
Authors
- Andries D. Hulst
- Piter Bijma
- Mart C. M. De Jong
- Content type: Research Article
- Open Access
- Published: 08 November 2022
- Article: 73
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A method to obtain exact single-step GBLUP for non-genotyped descendants when the genomic relationship matrix of ancestors is not available
Authors
- Dorian J. Garrick
- Rohan L. Fernando
- Content type: Research Article
- Open Access
- Published: 31 October 2022
- Article: 72
This is part of 1 collection: -
Mutation of the MYH3 gene causes recessive cleft palate in Limousine cattle
Authors (first, second and last of 10)
- Anne Vaiman
- Sébastien Fritz
- Amandine Duchesne
- Content type: Research Article
- Open Access
- Published: 29 October 2022
- Article: 71
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Inbreeding and pedigree analysis of the European red dairy cattle
Authors (first, second and last of 7)
- Sofia Nyman
- Anna M. Johansson
- Dirk-Jan de Koning
- Content type: Research Article
- Open Access
- Published: 23 October 2022
- Article: 70
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Impacts of additive, dominance, and inbreeding depression effects on genomic evaluation by combining two SNP chips in Canadian Yorkshire pigs bred in China
Authors (first, second and last of 6)
- Quanshun Mei
- Zulma G. Vitezica
- Tao Xiang
- Content type: Research Article
- Open Access
- Published: 22 October 2022
- Article: 69
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Genetic parameters of colostrum and calf serum antibodies in Swedish dairy cattle
Authors (first, second and last of 11)
- Juan Cordero-Solorzano
- Dirk-Jan de Koning
- Jonas Johansson Wensman
- Content type: Research Article
- Open Access
- Published: 22 October 2022
- Article: 68
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New insights into the genetic resistance to paratuberculosis in Holstein cattle via single-step genomic evaluation
Authors (first, second and last of 8)
- Marie-Pierre Sanchez
- Thierry Tribout
- Didier Boichard
- Content type: Research Article
- Open Access
- Published: 15 October 2022
- Article: 67
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Theoretical accuracy for indirect predictions based on SNP effects from single-step GBLUP
Authors (first, second and last of 6)
- Andre Garcia
- Ignacio Aguilar
- Daniela Lourenco
- Content type: Research Article
- Open Access
- Published: 27 September 2022
- Article: 66
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Genomic prediction with whole-genome sequence data in intensely selected pig lines
Authors (first, second and last of 8)
- Roger Ros-Freixedes
- Martin Johnsson
- John M. Hickey
- Content type: Research Article
- Open Access
- Published: 24 September 2022
- Article: 65
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Causal inference for the covariance between breeding values under identity disequilibrium
Authors (first, second and last of 4)
- Rodolfo J. C. Cantet
- Belcy K. Angarita-Barajas
- Sebastián Munilla
- Content type: Research Article
- Open Access
- Published: 23 September 2022
- Article: 64
This is part of 1 collection: -
Optimization of alternative breeding schemes for the genetic improvement of common Tigray highland sheep in northern Ethiopia
Authors (first, second and last of 4)
- Kiflay Welday Haileselassie
- Solomon Abgaz Kebede
- Solomon Gizaw GebreMichael
- Content type: Research Article
- Open Access
- Published: 16 September 2022
- Article: 63
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Integration of multi-omics data reveals cis-regulatory variants that are associated with phenotypic differentiation of eastern from western pigs
Authors (first, second and last of 29)
- Yuwen Liu
- Yang Fu
- Zhonglin Tang
- Content type: Research Article
- Open Access
- Published: 14 September 2022
- Article: 62
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Genetics of the phenotypic evolution in sheep: a molecular look at diversity-driving genes
Authors (first, second and last of 7)
- Peter Kalds
- Shiwei Zhou
- Xiaolong Wang
- Content type: Review
- Open Access
- Published: 09 September 2022
- Article: 61
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Sharing of either phenotypes or genetic variants can increase the accuracy of genomic prediction of feed efficiency
Authors (first, second and last of 15)
- Sunduimijid Bolormaa
- Iona M. MacLeod
- Jennie E. Pryce
- Content type: Research Article
- Open Access
- Published: 06 September 2022
- Article: 60
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Optimal experimental designs for estimating genetic and non-genetic effects underlying infectious disease transmission
Authors (first, second and last of 4)
- Christopher Pooley
- Glenn Marion
- Andrea Doeschl-Wilson
- Content type: Research Article
- Open Access
- Published: 05 September 2022
- Article: 59
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Assessment of genotyping array performance for genome-wide association studies and imputation in African cattle
Authors (first, second and last of 23)
- Valentina Riggio
- Abdulfatai Tijjani
- Liam J. Morrison
- Content type: Research Article
- Open Access
- Published: 04 September 2022
- Article: 58
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International single-step SNPBLUP beef cattle evaluations for Limousin weaning weight
Authors (first, second and last of 8)
- Renzo Bonifazi
- Mario P. L. Calus
- Jérémie Vandenplas
- Content type: Research Article
- Open Access
- Published: 04 September 2022
- Article: 57
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Managing genetic diversity in breeding programs of small populations: the case of French local chicken breeds
Authors (first, second and last of 10)
- Gwendal Restoux
- Xavier Rognon
- Michèle Tixier-Boichard
- Content type: Research Article
- Open Access
- Published: 03 August 2022
- Article: 56
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Gut microbiota and host genetics contribute to the phenotypic variation of digestive and feed efficiency traits in growing pigs fed a conventional and a high fiber diet
Authors (first, second and last of 9)
- Vanille Déru
- Francesco Tiezzi
- Hélène Gilbert
- Content type: Research Article
- Open Access
- Published: 27 July 2022
- Article: 55
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Origin, evolution, and tissue-specific functions of the porcine repetitive element 1
Authors (first, second and last of 5)
- Min Zheng
- Tianfu Guo
- Lusheng Huang
- Content type: Research Article
- Open Access
- Published: 27 July 2022
- Article: 54
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Analysis of the causal structure of traits involved in sow lactation feed efficiency
Authors (first, second and last of 6)
- Mónica Mora
- Ingrid David
- Miriam Piles
- Content type: Research Article
- Open Access
- Published: 26 July 2022
- Article: 53
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On the equivalence between marker effect models and breeding value models and direct genomic values with the Algorithm for Proven and Young
Authors (first, second and last of 5)
- Matias Bermann
- Daniela Lourenco
- Ignacy Misztal
- Content type: Research Article
- Open Access
- Published: 16 July 2022
- Article: 52
This is part of 1 collection: -
Performance of the No-U-Turn sampler in multi-trait variance component estimation using genomic data
Authors
- Motohide Nishio
- Aisaku Arakawa
- Content type: Research Article
- Open Access
- Published: 11 July 2022
- Article: 51
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A genome-wide screen for resilient responses in growing pigs
Authors (first, second and last of 6)
- Houda Laghouaouta
- Lorenzo Fraile
- Ramona Natacha Pena
- Content type: Research Article
- Open Access
- Published: 04 July 2022
- Article: 50
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Development and validation of a horse reference panel for genotype imputation
Authors (first, second and last of 4)
- Paula Reich
- Clemens Falker-Gieske
- Jens Tetens
- Content type: Research Article
- Open Access
- Published: 04 July 2022
- Article: 49
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Impact of genomic preselection on subsequent genetic evaluations with ssGBLUP using real data from pigs
Authors (first, second and last of 6)
- Ibrahim Jibrila
- Jeremie Vandenplas
- Mario P. L. Calus
- Content type: Research Article
- Open Access
- Published: 28 June 2022
- Article: 48
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Impact of linkage disequilibrium heterogeneity along the genome on genomic prediction and heritability estimation
Authors (first, second and last of 8)
- Duanyang Ren
- Xiaodian Cai
- Zhe Zhang
- Content type: Research Article
- Open Access
- Published: 27 June 2022
- Article: 47
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Use of Bayes factors to evaluate the effects of host genetics, litter and cage on the rabbit cecal microbiota
Authors (first, second and last of 5)
- MarÃa Velasco-Galilea
- Miriam Piles
- Juan Pablo Sánchez
- Content type: Research Article
- Open Access
- Published: 27 June 2022
- Article: 46
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A new approach fits multivariate genomic prediction models efficiently
Authors
- Alencar Xavier
- David Habier
- Content type: Research Article
- Open Access
- Published: 17 June 2022
- Article: 45
This is part of 1 collection: -
Estimation of dam line composition of 3-way crossbred animals using genomic information
Authors (first, second and last of 4)
- Mario P. L. Calus
- John M. Henshall
- Jérémie Vandenplas
- Content type: Research Article
- Open Access
- Published: 15 June 2022
- Article: 44
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Two approaches to account for genotype-by-environment interactions for production traits and age at first calving in South African Holstein cattle
Authors (first, second and last of 6)
- Vincent Ducrocq
- Astrid Cadet
- Frederick Wilhelm Cornelius Neser
- Content type: Research Article
- Open Access
- Published: 11 June 2022
- Article: 43
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Genotyping and phenotyping strategies for genetic improvement of meat quality and carcass composition in swine
Authors (first, second and last of 7)
- Emmanuel André Lozada-Soto
- Daniela Lourenco
- Francesco Tiezzi
- Content type: Research Article
- Open Access
- Published: 07 June 2022
- Article: 42
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Inheritance of the duration of fertility in chickens and its correlation with laying performance
Authors (first, second and last of 8)
- Chaoliang Wen
- Chunning Mai
- Ning Yang
- Content type: Research Article
- Open Access
- Published: 03 June 2022
- Article: 41
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Genomic analysis of the slope of the reaction norm for body weight in Australian sheep
Authors (first, second and last of 4)
- Dominic L. Waters
- Sam A. Clark
- Julius H. van der Werf
- Content type: Research Article
- Open Access
- Published: 03 June 2022
- Article: 40
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Rare and population-specific functional variation across pig lines
Authors (first, second and last of 7)
- Roger Ros-Freixedes
- Bruno D. Valente
- Martin Johnsson
- Content type: Research Article
- Open Access
- Published: 03 June 2022
- Article: 39
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Single-step genomic BLUP with genetic groups and automatic adjustment for allele coding
Authors
- Ismo Strandén
- Gert P. Aamand
- Esa A. Mäntysaari
- Content type: Research Article
- Open Access
- Published: 02 June 2022
- Article: 38
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MetaGS: an accurate method to impute and combine SNP effects across populations using summary statistics
Authors (first, second and last of 4)
- Abdulqader Jighly
- Haifa Benhajali
- Mike E. Goddard
- Content type: Research Article
- Open Access
- Published: 02 June 2022
- Article: 37
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Copula miss-specification in REML multivariate genetic animal model estimation
Authors
- Tom Rohmer
- Anne Ricard
- Ingrid David
- Content type: Research Article
- Open Access
- Published: 26 May 2022
- Article: 36
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Genetic variants associated with two major bovine milk fatty acids offer opportunities to breed for altered milk fat composition
Authors (first, second and last of 9)
- Tim Martin Knutsen
- Hanne Gro Olsen
- Sigbjørn Lien
- Content type: Research Article
- Open Access
- Published: 26 May 2022
- Article: 35
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A comprehensive study on size and definition of the core group in the proven and young algorithm for single-step GBLUP
Authors
- Rostam Abdollahi-Arpanahi
- Daniela Lourenco
- Ignacy Misztal
- Content type: Research Article
- Open Access
- Published: 20 May 2022
- Article: 34
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Recombination rates in pigs differ between breeds, sexes and individuals, and are associated with the RNF212, SYCP2, PRDM7, MEI1 and MSH4 loci
Authors (first, second and last of 4)
- Cathrine Brekke
- Peer Berg
- Susan E. Johnston
- Content type: Research Article
- Open Access
- Published: 20 May 2022
- Article: 33