Volume 52, issue 1, December 2020
71 articles in this issue
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A systems biology framework integrating GWAS and RNA-seq to shed light on the molecular basis of sperm quality in swine
Authors (first, second and last of 8)
- Marta Gòdia
- Antonio Reverter
- Alex Clop
- Content type: Research Article
- Open Access
- Published: 08 December 2020
- Article: 72
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Advances and perspectives in selecting resistance traits against the parasitic mite Varroa destructor in honey bees
Authors (first, second and last of 4)
- Matthieu Guichard
- Vincent Dietemann
- Benjamin Dainat
- Content type: Review
- Open Access
- Published: 27 November 2020
- Article: 71
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Correction to: Genomic diversity and population structure of the Leonberger dog breed
Authors (first, second and last of 7)
- Anna Letko
- Katie M. Minor
- Cord Drögemüller
- Content type: Correction
- Open Access
- Published: 18 November 2020
- Article: 70
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Spatial modelling improves genetic evaluation in smallholder breeding programs
Authors (first, second and last of 5)
- Maria L. Selle
- Ingelin Steinsland
- Gregor Gorjanc
- Content type: Research Article
- Open Access
- Published: 16 November 2020
- Article: 69
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A 50-kb deletion disrupting the RSPO2 gene is associated with tetradysmelia in Holstein Friesian cattle
Authors (first, second and last of 5)
- Doreen Becker
- Rosemarie Weikard
- Christa Kühn
- Content type: Research Article
- Open Access
- Published: 11 November 2020
- Article: 68
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Gene networks for three feed efficiency criteria reveal shared and specific biological processes
Authors (first, second and last of 9)
- Sébastien Taussat
- Mekki Boussaha
- Gilles Renand
- Content type: Research Article
- Open Access
- Published: 10 November 2020
- Article: 67
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Genomic regions and signaling pathways associated with indicator traits for feed efficiency in juvenile Atlantic salmon (Salmo salar)
Authors (first, second and last of 9)
- Hanne Dvergedal
- Thomas Nelson Harvey
- Gunnar Klemetsdal
- Content type: Research Article
- Open Access
- Published: 06 November 2020
- Article: 66
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Optimizing genomic reference populations to improve crossbred performance
Authors
- Yvonne C. J. Wientjes
- Piter Bijma
- Mario P. L. Calus
- Content type: Research Article
- Open Access
- Published: 06 November 2020
- Article: 65
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Inbreeding depression across the genome of Dutch Holstein Friesian dairy cattle
Authors (first, second and last of 6)
- Harmen P. Doekes
- Piter Bijma
- Jack J. Windig
- Content type: Research Article
- Open Access
- Published: 28 October 2020
- Article: 64
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Development of a genetic evaluation for hair shedding in American Angus cattle to improve thermotolerance
Authors (first, second and last of 5)
- Harly J. Durbin
- Duc Lu
- Jared E. Decker
- Content type: Research Article
- Open Access
- Published: 21 October 2020
- Article: 63
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Genetic inbreeding depression load for morphological traits and defects in the Pura Raza Española horse
Authors (first, second and last of 7)
- Julia Poyato-Bonilla
- Davinia I. Perdomo-González
- Mercedes Valera
- Content type: Research Article
- Open Access
- Published: 20 October 2020
- Article: 62
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Genomic diversity and population structure of the Leonberger dog breed
Authors (first, second and last of 7)
- Anna Letko
- Katie M. Minor
- Cord Drögemüller
- Content type: Research Article
- Open Access
- Published: 14 October 2020
- Article: 61
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Why breed disease-resilient livestock, and how?
Authors
- Pieter W. Knap
- Andrea Doeschl-Wilson
- Content type: Review
- Open Access
- Published: 14 October 2020
- Article: 60
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Genome-wide analysis of expression QTL (eQTL) and allele-specific expression (ASE) in pig muscle identifies candidate genes for meat quality traits
Authors (first, second and last of 12)
- Yan Liu
- Xiaolei Liu
- Xuewen Xu
- Content type: Research Article
- Open Access
- Published: 09 October 2020
- Article: 59
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Prediction of genetic merit for growth rate in pigs using animal models with indirect genetic effects and genomic information
Authors (first, second and last of 5)
- Bjarke G. Poulsen
- Birgitte Ask
- Ole F. Christensen
- Content type: Research Article
- Open Access
- Published: 07 October 2020
- Article: 58
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The impact of training on data from genetically-related lines on the accuracy of genomic predictions for feed efficiency traits in pigs
Authors (first, second and last of 5)
- Amir Aliakbari
- Emilie Delpuech
- Hélène Gilbert
- Content type: Research Article
- Open Access
- Published: 07 October 2020
- Article: 57
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Direct and correlated responses to selection for autumn lambing in sheep
Authors
- Masood Asadi-Fozi
- Heather L. Bradford
- David R. Notter
- Content type: Research Article
- Open Access
- Published: 02 October 2020
- Article: 56
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Confirmed effects of candidate variants for milk production, udder health, and udder morphology in dairy cattle
Authors (first, second and last of 9)
- Thierry Tribout
- Pascal Croiseau
- Marie-Pierre Sanchez
- Content type: Research Article
- Open Access
- Published: 01 October 2020
- Article: 55
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Use of gene expression and whole-genome sequence information to improve the accuracy of genomic prediction for carcass traits in Hanwoo cattle
Authors (first, second and last of 10)
- Sara de las Heras-Saldana
- Bryan Irvine Lopez
- Julius H. J. van der Werf
- Content type: Research Article
- Open Access
- Published: 29 September 2020
- Article: 54
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Selection for feed efficiency using the social effects animal model in growing Duroc pigs: evaluation by simulation
Authors
- William Herrera-Cáceres
- Juan Pablo Sánchez
- Content type: Research Article
- Open Access
- Published: 29 September 2020
- Article: 53
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Signatures of selection reveal candidate genes involved in economic traits and cold acclimation in five Swedish cattle breeds
Authors (first, second and last of 8)
- Seyed Mohammad Ghoreishifar
- Susanne Eriksson
- Arash Javanmard
- Content type: Research Article
- Open Access
- Published: 04 September 2020
- Article: 52
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Genetic control of temperament traits across species: association of autism spectrum disorder risk genes with cattle temperament
Authors (first, second and last of 11)
- Roy Costilla
- Kathryn E. Kemper
- Ben J. Hayes
- Content type: Research Article
- Open Access
- Published: 26 August 2020
- Article: 51
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Theoretical and empirical comparisons of expected and realized relationships for the X-chromosome
Authors
- Tom Druet
- Andres Legarra
- Content type: Research Article
- Open Access
- Published: 20 August 2020
- Article: 50
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Prediction of genomic breeding values based on pre-selected SNPs using ssGBLUP, WssGBLUP and BayesB for Edwardsiellosis resistance in Japanese flounder
Authors (first, second and last of 11)
- Sheng Lu
- Yang Liu
- Songlin Chen
- Content type: Research Article
- Open Access
- Published: 18 August 2020
- Article: 49
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Weighted single-step genomic best linear unbiased prediction integrating variants selected from sequencing data by association and bioinformatics analyses
Authors (first, second and last of 11)
- Aoxing Liu
- Mogens Sandø Lund
- Guosheng Su
- Content type: Research Article
- Open Access
- Published: 14 August 2020
- Article: 48
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Bias and accuracy of dairy sheep evaluations using BLUP and SSGBLUP with metafounders and unknown parent groups
Authors (first, second and last of 6)
- Fernando L. Macedo
- Ole F. Christensen
- Andrés Legarra
- Content type: Research Article
- Open Access
- Published: 12 August 2020
- Article: 47
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X chromosome variants are associated with male fertility traits in two bovine populations
Authors (first, second and last of 11)
- Marina R. S. Fortes
- Laercio R. Porto-Neto
- Gry B. Boe-Hansen
- Content type: Research Article
- Open Access
- Published: 12 August 2020
- Article: 46
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Feed competition reduces heritable variation for body weight in Litopenaeus vannamei
Authors (first, second and last of 7)
- Sheng Luan
- Guangfeng Qiang
- Jie Kong
- Content type: Research Article
- Open Access
- Published: 08 August 2020
- Article: 45
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A genome-wide analysis of copy number variation in Murciano-Granadina goats
Authors (first, second and last of 11)
- Dailu Guan
- Amparo MartÃnez
- Marcel Amills
- Content type: Research Article
- Open Access
- Published: 08 August 2020
- Article: 44
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Genomic diversity and population structure of the indigenous Greek and Cypriot cattle populations
Authors (first, second and last of 11)
- Dimitris Papachristou
- Panagiota Koutsouli
- Ivica Medugorac
- Content type: Research Article
- Open Access
- Published: 29 July 2020
- Article: 43
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Investigating the impact of preselection on subsequent single-step genomic BLUP evaluation of preselected animals
Authors (first, second and last of 5)
- Ibrahim Jibrila
- Jan ten Napel
- Mario P. L. Calus
- Content type: Research Article
- Open Access
- Published: 29 July 2020
- Article: 42
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Modeling host-microbiome interactions for the prediction of meat quality and carcass composition traits in swine
Authors (first, second and last of 6)
- Piush Khanal
- Christian Maltecca
- Francesco Tiezzi
- Content type: Research Article
- Open Access
- Published: 29 July 2020
- Article: 41
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The genetic heritage of Alpine local cattle breeds using genomic SNP data
Authors (first, second and last of 14)
- Gabriele Senczuk
- Salvatore Mastrangelo
- Martino Cassandro
- Content type: Research Article
- Open Access
- Published: 14 July 2020
- Article: 40
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Inbreeding depression for kit survival at birth in a rabbit population under long-term selection
Authors (first, second and last of 7)
- Ino Curik
- György Kövér
- Istvan Nagy
- Content type: Research Article
- Open Access
- Published: 08 July 2020
- Article: 39
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Extending long-range phasing and haplotype library imputation algorithms to large and heterogeneous datasets
Authors (first, second and last of 7)
- Daniel Money
- David Wilson
- John M. Hickey
- Content type: Research Article
- Open Access
- Published: 08 July 2020
- Article: 38
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Meta-analysis for milk fat and protein percentage using imputed sequence variant genotypes in 94,321 cattle from eight cattle breeds
Authors (first, second and last of 12)
- Irene van den Berg
- Ruidong Xiang
- Mike E. Goddard
- Content type: Research Article
- Open Access
- Published: 07 July 2020
- Article: 37
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Modelling the shape of the pig scapula
Authors
- Øyvind Nordbø
- Content type: Research Article
- Open Access
- Published: 01 July 2020
- Article: 36
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Highly efficient generation of sheep with a defined FecBB mutation via adenine base editing
Authors (first, second and last of 21)
- Shiwei Zhou
- Yige Ding
- Yulin Chen
- Content type: Short communication
- Open Access
- Published: 01 July 2020
- Article: 35
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Genetic parameters of resistance to pasteurellosis using novel response traits in rabbits
Authors (first, second and last of 12)
- Merina Shrestha
- Hervé Garreau
- Mélanie Gunia
- Content type: Research Article
- Open Access
- Published: 26 June 2020
- Article: 34
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Whole-genome sequencing of European autochthonous and commercial pig breeds allows the detection of signatures of selection for adaptation of genetic resources to different breeding and production systems
Authors (first, second and last of 31)
- Samuele Bovo
- Anisa Ribani
- Luca Fontanesi
- Content type: Research Article
- Open Access
- Published: 26 June 2020
- Article: 33
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Impact of sub-setting the data of the main Limousin beef cattle population on the estimates of across-country genetic correlations
Authors (first, second and last of 6)
- Renzo Bonifazi
- Jeremie Vandenplas
- Mario P. L. Calus
- Content type: Research Article
- Open Access
- Published: 23 June 2020
- Article: 32
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Effect of genomic selection and genotyping strategy on estimation of variance components in animal models using different relationship matrices
Authors (first, second and last of 9)
- Lei Wang
- Luc L. Janss
- Just Jensen
- Content type: Research Article
- Open Access
- Published: 11 June 2020
- Article: 31
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Correction to: Genome-wide SNP data unveils the globalization of domesticated pigs
Authors (first, second and last of 22)
- Bin Yang
- Leilei Cui
- Hendrik-Jan Megens
- Content type: Correction
- Open Access
- Published: 04 June 2020
- Article: 30
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Diversity of endogenous avian leukosis virus subgroup E (ALVE) insertions in indigenous chickens
Authors (first, second and last of 8)
- Andrew S. Mason
- Katarzyna Miedzinska
- Jacqueline Smith
- Content type: Research Article
- Open Access
- Published: 01 June 2020
- Article: 29
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Use of whole-genome sequence data and novel genomic selection strategies to improve selection for age at puberty in tropically-adapted beef heifers
Authors (first, second and last of 13)
- Christie L. Warburton
- Bailey N. Engle
- Ben J. Hayes
- Content type: Research Article
- Open Access
- Published: 27 May 2020
- Article: 28
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Selection signatures in tropical cattle are enriched for promoter and coding regions and reveal missense mutations in the damage response gene HELB
Authors (first, second and last of 7)
- Marina Naval-Sánchez
- Laercio R. Porto-Neto
- Antonio Reverter
- Content type: Research Article
- Open Access
- Published: 27 May 2020
- Article: 27
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Bayesian neural networks with variable selection for prediction of genotypic values
Authors (first, second and last of 7)
- Giel H. H. van Bergen
- Pascal Duenk
- Hilbert J. Kappen
- Content type: Research Article
- Open Access
- Published: 15 May 2020
- Article: 26
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On the origin of European sheep as revealed by the diversity of the Balkan breeds and by optimizing population-genetic analysis tools
Authors (first, second and last of 28)
- Elena Ciani
- Salvatore Mastrangelo
- Johannes A. Lenstra
- Content type: Research Article
- Open Access
- Published: 14 May 2020
- Article: 25
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Computational strategies for the preconditioned conjugate gradient method applied to ssSNPBLUP, with an application to a multivariate maternal model
Authors (first, second and last of 4)
- Jeremie Vandenplas
- Herwin Eding
- Mario P. L. Calus
- Content type: Research Article
- Open Access
- Published: 13 May 2020
- Article: 24