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Gene Cloning of Endoglucanase Cel5A from Cellulose-Degrading Paenibacillus xylanilyticus KJ-03 and Purification and Characterization of the Recombinant Enzyme

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Abstract

The bacterial strain Paenibacillus xylanilyticus KJ-03 was isolated from a sample of soil used for cultivating Amorphophallus konjac. The cellulase gene, cel5A was cloned using fosmid library and expressed in Escherichia coli BL21 (trxB). The cel5A gene consists of a 1,743 bp open reading frame and encodes 581 amino acids of a protein. Cel5A contains N-terminal signal peptide, a catalytic domain of glycosyl hydrolase family 5, and DUF291 domain with unknown function. The recombinant cellulase was purified by Ni-affinity chromatography. The cellulase activity of Cel5A was detected in clear band with a molecular weight of 64 kDa by zymogram active staining. The maximum activity of the purified enzyme was displayed at a temperature of 40 °C and pH 6.0 when carboxymethyl cellulose was used as a substrate. It has 44% of its maximum activity at 70 °C and retained 66% of its original activity at 45 °C for 1 h. The purified cellulase hydrolyzed avicel, CMC, filter paper, xylan, and 4-methylumbelliferyl β-d-cellobiose, but no activity was detected against p-nitrophenyl β-d-glucoside. The end products of the hydrolysis of cellotetraose and cellopentaose by Cel5A were detected by thin layer chromatography, while enzyme did not hydrolyze cellobiose and cellotriose.

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Abbreviations

Cel5A:

Cellulase from Paenibacillus xylanilyticus KJ-03

LB:

Luria–Bertani

TSA:

Tryptic soy agar

CMC:

Carboxymethyl cellulose

IPTG:

Isopropyl-β-d-thiogalactopyranoside

SDS-PAGE:

Sodium dodecyl sulphate polyacrylamide gel electrophoresis

DNS:

Dinitrosalicylic acid

DTT:

Dithiothreitol

EDTA:

Ethylenediaminetetraacetic acid

TLC:

Thin layer chromatography

ORF:

Open reading frame

GH 5 family:

Glycosyl hydrolase 5 family

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Acknowledgment

This research was supported by Basic Science Research Program through the National Research Foundation of Korea (NRF) funded by the Ministry of Education, Science and Technology (2011-0008619).

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Correspondence to Yong-Lark Choi.

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Park, IH., Chang, J., Lee, YS. et al. Gene Cloning of Endoglucanase Cel5A from Cellulose-Degrading Paenibacillus xylanilyticus KJ-03 and Purification and Characterization of the Recombinant Enzyme. Protein J 31, 238–245 (2012). https://doi.org/10.1007/s10930-012-9396-7

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  • DOI: https://doi.org/10.1007/s10930-012-9396-7

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