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Molecular variability of sweet potato chlorotic stunt virus (SPCSV) and five potyviruses infecting sweet potato in China

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Abstract

To obtain a better understanding of the molecular variation of sweet potato viruses in China, 131 samples were collected from symptomatic sweet potato plants and used for RT-PCR analysis of the heat shock protein 70 (hsp70) gene sequence of sweet potato chlorotic stunt virus (SPCSV) and the coat protein (CP) gene sequences of five potyviruses (SPFMV, SPVC, SPVG, SPLV and SPV2). The hsp70 sequences that were obtained provided evidence for the presence of two distinct strains of SPCSV. Analysis of the CP sequences amplified from the samples indicated that all five potyviruses infect sweet potato in China, and three different strains of SPFMV and two of SPVG were found.

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References

  1. Aritua V, Barg E, Adipala E, Gibson RW, Vetten HJ (2008) Further evidence for limited genetic diversity among East African isolates of sweet potato chlorotic stunt virus. J Phytopathol 156:181–189

    Google Scholar 

  2. Ateka EM, Barg E, Njeru RW, Thompson G, Vetten HJ (2007) Biological and molecular variability among geographically diverse isolate of sweet potato virus 2. Arch Virol 152:479–488

    Article  PubMed  CAS  Google Scholar 

  3. Clark CA, Davis JA, Abad JA, Cuellar W, Fuentes S, Kreuze J, Gibson R, Mukasa SB, Tugume AK, Tairo F, Valkonen JPT (2012) Sweet potato viruses: 15 years of progress on understanding and managing complex diseases. Plant Dis 96:168–185

    Article  CAS  Google Scholar 

  4. Colinet D, Kummert J, Lepoivre P (1997) Evidence for assignment of two strains of SPLV to the genus Potyvirus based on coat protein and 3’ non-coding region sequence data. Virus Res 49:91–100

    Article  PubMed  CAS  Google Scholar 

  5. Cuellar WJ, Cruzado RK, Fuentes S, Untiveros M, Soto M, Kreuze JF (2011) Sequence characterization of a Peruvian isolate of Sweet potato chlorotic stunt virus: further variability and a model for p22 acquisition. Virus Res 157:111–115

    Article  PubMed  CAS  Google Scholar 

  6. Kumar S, Tamura K, Nei M (2004) MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Briefings Bioinform 5:150–163

    Article  CAS  Google Scholar 

  7. Ma D, Li H, Tang J, Xie Y, Li Q, Cao Q, Zhang Y, Zhang A (2010) Current status and future prospects of development of sweet potato industry in China. Sweet potato in food and energy security: In: Proceedings of China Xuzhou 4th international sweet potato symposium and 4th China–Japan–Korea sweet potato workshop. Xuzhou, China, pp 3–10

  8. Qiao Q, Zhang ZC, Zhang DS, Qin YH, Tian YT, Wang YJ (2012) Serological and molecular detection of viruses infecting sweet potato in China (in Chinese). Acta Phytopathol Sin 42(1):10–16

    Google Scholar 

  9. Rännäli M, Czekaj V, Jones RAC, Fletcher JD, Davis RI, Mu L, Dwyer GI, Coutts BA, Valkonen JPT (2008) Molecular genetic characterization of Sweet potato virus G (SPVG) isolates from areas of the Pacific Ocean and southern Africa. Plant Dis 92:1313–1320

    Article  Google Scholar 

  10. Rännäli M, Czekaj V, Jones RAC, Fletcher JD, Davis RI, Mu L, Valkonen JPT (2009) Molecular characterization of Sweet potato feathery mottle virus (SPFMV) isolates from Easter Island, French Polynesia, New Zealand and southern Africa. Plant Dis 93:933–939

    Article  Google Scholar 

  11. Tairo F, Mukasa SB, Jones RAC, Kullaya A, Rubaihayo PR, Valkonen JPT (2005) Unravelling the genetic diversity of the three main viruses involved in sweet potato virus disease (SPVD), and its practical implications. Mol Plant Pathol 6:199–211

    Article  PubMed  CAS  Google Scholar 

  12. Untiveros M, Fuentes S, Kreuze J (2008) Molecular variability of sweet potato feathery mottle virus and other potyviruses infecting sweet potato in Peru. Arch Virol 153:473–483

    Article  PubMed  CAS  Google Scholar 

  13. Untiveros M, Quispe D, Kreuze J (2010) Analysis of complete genomic sequences of isolates of the Sweet potato feathery mottle virus strains C and EA: molecular evidence for two distinct potyvirus species and two P1 protein domains. Arch Virol 155:2059–2063

    Article  PubMed  CAS  Google Scholar 

  14. Yamasaki S, Sakai J, Fuji S, Kamisoyama S, Hanada K, Emoto K, Ohshima K, Hanada K (2010) Comparisons among isolates of sweet potato feathery mottle virus using complete genomic RNA sequences. Arch Virol 155:795–800

    Article  PubMed  CAS  Google Scholar 

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Acknowledgments

This work was supported by a grant from the Earmarked Fund for China Agriculture Research System (CARS-11-B-07).

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Correspondence to Zhenchen Zhang.

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Qin, Y., Zhang, Z., Qiao, Q. et al. Molecular variability of sweet potato chlorotic stunt virus (SPCSV) and five potyviruses infecting sweet potato in China. Arch Virol 158, 491–495 (2013). https://doi.org/10.1007/s00705-012-1503-8

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  • DOI: https://doi.org/10.1007/s00705-012-1503-8

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