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Analysis of Endocytosis and Intracellular Trafficking of Boric Acid/Borate Transport Proteins in Arabidopsis

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Plant Endosomes

Part of the book series: Methods in Molecular Biology ((MIMB,volume 2177))

Abstract

Plants take up inorganic nutrients from the soil by transport proteins located in the plasma membrane of root cells. Boron (B) is an essential element for plant growth; it taken up and translocated by boric acid channels such as NIP5;1 and borate exporters such as BOR1 in Arabidopsis. NIP5;1 and BOR1 are localized to the plasma membrane of various root cells in polar manners toward soil- and stele-side, respectively, for efficient transport of B. In response to elevated B concentration, BOR1 undergoes vacuolar sorting for degradation to avoid accumulation of B to a toxic level in tissues. The polar localization and vacuolar sorting of the transport proteins are regulated through differential mechanisms of endocytosis and intracellular trafficking. In this chapter, we describe methods for quantitative live-cell imaging of GFP-NIP5;1 and BOR1-GFP as markers for the polar and vacuolar trafficking.

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References

  1. Nakamura M, Grebe M (2018) Outer, inner and planar polarity in the Arabidopsis root. Curr Opin Plant Biol 41:46–53

    Article  CAS  Google Scholar 

  2. Paez Valencia J, Goodman K, Otegui MS (2016) Endocytosis and endosomal trafficking in plants. Annu Rev Plant Biol 67:309–335

    Article  CAS  Google Scholar 

  3. Takano J, Miwa K, Yuan L, von Wiren N, Fujiwara T (2005) Endocytosis and degradation of BOR1, a boron transporter of Arabidopsis thaliana, regulated by boron availability. Proc Natl Acad Sci 102:12276–12281

    Article  CAS  Google Scholar 

  4. Liu C, Shen W, Yang C, Zeng L, Gao C (2018) Knowns and unknowns of plasma membrane protein degradation in plants. Plant Sci 272:55–61

    Article  CAS  Google Scholar 

  5. Yoshinari A, Takano J (2017) Insights into the mechanisms underlying boron homeostasis in plants. Front Plant Sci 8:1–8

    Article  Google Scholar 

  6. Funakawa H, Miwa K (2015) Synthesis of borate cross-linked rhamnogalacturonan II. Front Plant Sci 6:1–8

    Article  Google Scholar 

  7. Takano J et al (2010) Polar localization and degradation of Arabidopsis boron transporters through distinct trafficking pathways. Proc Natl Acad Sci U S A 107:5220–5225

    Article  CAS  Google Scholar 

  8. Takano J (2006) The Arabidopsis major intrinsic protein NIP5;1 is essential for efficient boron uptake and plant development under boron limitation. Plant Cell 18:1498–1509

    Article  Google Scholar 

  9. Takano J et al (2002) Arabidopsis boron transporter for xylem loading. Nature 420:337–340

    Article  CAS  Google Scholar 

  10. Tanaka M et al (2016) The minimum open reading frame, AUG-stop, induces boron-dependent ribosome stalling and mRNA degradation. Plant Cell 28:2830–2849

    Article  CAS  Google Scholar 

  11. Aibara I et al (2018) Boron-dependent translational suppression of the borate exporter BOR1 contributes to the avoidance of boron toxicity. Plant Physiol 177:759–774

    Article  CAS  Google Scholar 

  12. Yoshinari A, Korbei B, Takano J (2018) TOL proteins mediate vacuolar sorting of the borate transporter BOR1 in Arabidopsis thaliana. Soil Sci Plant Nutr 64:598–605

    Article  CAS  Google Scholar 

  13. Viotti C et al (2010) Endocytic and secretory traffic in Arabidopsis merge in the trans-golgi network/early endosome, an independent and highly dynamic organelle. Plant Cell 22:1344–1357

    Article  CAS  Google Scholar 

  14. Yoshinari A et al (2019) Polar localization of the borate exporter BOR1 requires AP2-dependent endocytosis. Plant Physiol 179:1569–1580

    Article  CAS  Google Scholar 

  15. Kasai K, Takano J, Miwa K, Toyoda A, Fujiwara T (2011) High boron-induced ubiquitination regulates vacuolar sorting of the BOR1 borate transporter in Arabidopsis thaliana. J Biol Chem 286:6175–6183

    Article  CAS  Google Scholar 

  16. Yoshinari A et al (2016) DRP1-dependent endocytosis is essential for polar localization and boron-induced degradation of the borate transporter BOR1 in arabidopsis thaliana. Plant Cell Physiol 57:1985–2000

    Article  CAS  Google Scholar 

  17. Wang S et al (2017) Polar localization of the NIP5;1 boric acid channel is maintained by endocytosis and facilitates boron transport in Arabidopsis roots. Plant Cell 29:824–842

    Article  CAS  Google Scholar 

  18. Kasai K, Takano J, Fujiwara T (2014) Analysis of endocytosis and ubiquitination of the BOR1 transporter. In: Otegui MS (ed) Plant endosomes: methods and protocols. Springer New York, New York, NY, pp 203–217

    Chapter  Google Scholar 

  19. Sotta N, Fujiwara T (2017) Preparing thin cross sections of Arabidopsis roots without embedding. Biotechniques 63:281–283

    Article  CAS  Google Scholar 

  20. Tamura K et al (2003) Why green fluorescent fusion proteins have not been observed in the vacuoles of higher plants. Plant J 35:545–555

    Article  CAS  Google Scholar 

  21. Berhin A et al (2019) The root cap cuticle: a cell wall structure for seedling establishment and lateral root formation. Cell 176:1367–1378

    Article  CAS  Google Scholar 

Download references

Acknowledgments

We thank Chinami Shinohara (Osaka Prefecture University) for providing a confocal micrograph of GFP-NIP5;1. This research was, in part, supported by Grant-in-Aid for Young Scientists (19K16164) to Akira Yoshinari and Grants-in-Aid (26712007 and 19H00934) to Junpei Takano from the Japan Society for the Promotion of Science.

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Correspondence to Junpei Takano .

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Yoshinari, A., Takano, J. (2020). Analysis of Endocytosis and Intracellular Trafficking of Boric Acid/Borate Transport Proteins in Arabidopsis. In: Otegui, M. (eds) Plant Endosomes. Methods in Molecular Biology, vol 2177. Humana, New York, NY. https://doi.org/10.1007/978-1-0716-0767-1_1

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  • DOI: https://doi.org/10.1007/978-1-0716-0767-1_1

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  • Publisher Name: Humana, New York, NY

  • Print ISBN: 978-1-0716-0766-4

  • Online ISBN: 978-1-0716-0767-1

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