Abstract
The simplest o-amidino benzoic acid—2-(amino(imino)methyl)benzoic acid—has been isolated in 23 % yield as a side product of the reaction of phthalonitrile and ammonia along with desired 1-imino-1H-isoindol-3-amine. This amidino acid was fully characterized by nuclear magnetic resonance, IR spectroscopy, mass spectrometry; pKa values were also determined. X-ray diffraction study and quantum chemical calculations revealed that in the solid state it exists as a zwitterion that is stabilized by intermolecular hydrogen bonds.
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Erk P, Hengelsberg H (2003) In: Kadish K, Guilard R, Smith KM (eds) The porphyrin handbook. Academic Press, New York
Radtke V, Erk P, Sens B (2002) In: Smith H (ed) High performance pigments. Wiley-VCH, Weinheim
Vollmann H (1971) In: Venkataraman K (ed) The chemistry of synthetic dyes. Academic Press, New York
Rösch G, Wolf W, Vollmann H (1954) Chem Abstr 48:30802
Elvidge JA, Barot NR (1977) In: Patai S (ed) The chemistry of double-bonded functional groups. Wiley, London
Elvidge JA, Linstead RP (1952) J Chem Soc 5000–5007
Sato R, Senzaki T, Shikazaki Y, Goto T, Saito M (1984) Chem Lett 13:1423–1426
Lowery MK, Starshak AJ, Esposito JN, Krueger PC, Kenney ME (1965) Inorg Chem 4:128–129
Sasa N, Okada K, Nakamura K, Okada S (1998) J Mol Struct 446:163–178
Morrissey MM, Buckman B, Mohan R (1998) Chem Abstr 128:204736
Maiorino RM, Weber GL, Aposhian HV (1986) J Chromatogr B 374:297–310
Alt GH, Franz JE (1976) Chem Abstr 85:1213
Kopylovich MN, Haukka M, Mahmudov KT (2015) Tetrahedron 71:8622–8627
Clare M, Hagen TJ, Houdek SC, Lennon PJ, Weier RM, Xu X (2005) Chem Abstr 142:463736
Cesar J, Pecar S (2005) Chem Abstr 143:229571
Wagner G, Vieweg H, Kuehmstedt H (1973) Pharmazie 28:288–292
Gans P, Sabatini A, Vacca A (1985) J Chem Soc Dalton 6:1195–1200
Sheldrick GM (2008) Acta Cryst. A64:112–122
Spek AL (2009) Acta Cryst. D65:148–155
Granovsky AA http://classic.chem.msu.su/gran/gamess
Gonzales C, Schlegel HB (1989) J Chem Phys 90:2154–2161
DiGangi FE, Gisvold O (1949) J Am Pharm Assoc Sci 38:154–158
Tanizawa K, Iskii S, Kanaoka Y (1968) Biochem Bioph Res Co 32:893–897
Tanizawa K, Iskii S, Kanaoka Y (1970) Chem Pharm Bull 18:2247–2252
Pinner A, Gradenwitz F (1897) Liebigs Ann Chem 298:45–53
Kirby JP, Roberts JA, Nocera DG (1997) J Am Chem Soc 118:9230–9236
Roberts JA, Kirby JP, Wall ST, Nocera DG (1997) Inorg Chim Acta 263:395–405
Papoutsakis D, Kirby JP, Jackson JE, Nocera DG (1999) Chem-Eur J 5:1474–1480
Young MB, Barrow JC, Glass KL, Lundell GF, Newton CL, Pellicore JM, Rittle KE, Selnick HG, Stauffer KJ, Vacca JP, Williams PD, Bohn D, Clayton FC, Cook JJ, Krueger JA, Kuo LC, Lewis SD, Lucas BJ, McMasters DR, Miller-Stein C, Pietrak BL, Wallace AA, White RB, Wong B, Yan Y, Nantermet PG (2004) J Med Chem 47:2995–3008
Borodkin VF, Postnikov VI (1974) Chem Abstr 81:105273
Baumann F, Bienert B, Rösch G, Vollmann H, Wolf W (1956) Angew Chem Int Edit 68:133–150
Leznoff CC, Lever ABP (1996) Phthalocyanines: properties and applications. VHC Publishers, New York
Borodkin VF (1958) Zh Prikl Khim (USSR) 5:813–816
Takahashi I, Nishiuchi K, Miyamoto R, Hatanaka M, Uchida H, Isa K, Sakushima A, Hosoi S (2005) Lett Org Chem 2:40–43
Orpen AG, Brammer I, Allen FH, Kennard O, Watson DG, Taylor R (1994) In: Burgi H-B, Dunitz JD (eds) Structure correlation. Wiley-VCH, Weinheim
Locke MJ, Hunter RL, McIver RT (1979) J Am Chem Soc 101:272–273
Bertran J, Rodriguez-Santiago L, Sodupe M (1999) J Phys Chem B 103:2310–2317
Chapo CJ, Paul JB, Provencal RA, Roth K, Saykally RJ (1998) J Am Chem Soc 120:12956–12957
Zhang DX, Wu LM, Koch KJ, Cooks RG (1999) Eur J Mass Spectrom 5:353–361
Julian RR, Hodyss R, Beauchamp JL (2001) J Am Chem Soc 123:3577–3583
Julian RR, Beauchamp JL, Goddard WA (2002) J Phys Chem A 106:32–34
Reece SY, Nocera DG (2009) Annu Rev Biochem 78:673–699 and cited herein
Melo A, Ramos MJ, Floriano WB, Gomes JANF, Leão JFR, Magalhaães AL, Maigret B, Nascimento MC, Reuter N (1999) J Mol Struct (Theochem) 463:81–90
Riordan JF, McElvany KD, Borders CL Jr (1977) Science 195(4281):884–886
Peterlin-Mašič L (2006) Curr Med Chem 13(30):3627–3648
Spiessens LIM, Anteunis MJO (1980) Bull Soc Chim Belg 89:205–231
Hafelinger G, Kuske FKH (1991) In: Patai S, Rappoport Z (eds) The chemistry of amidines and imidates. Wiley, Chichester
Vanden Eynde JJ, Mayence A, Mottamal M, Bacchi CJ, Yarlett N, Kaiser M, Brun R, Huang TL (2016) Pharmaceuticals 9: doi:10.3390/ph9020020
Sánchez MI, Vázquez O, Vázquez ME, Mascarenas JL (2011) Chem Commun 47:11107–11109
Bordello J, Sánchez MI, Vázquez ME, Mascarenas JL, Al-Soufi W, Novo M (2014) Chem Eur J 20:1–12
Alves NJ, Kline JA (2015) Biochem Bioph Res Co 457:358–362
Chen M-T, Wu K-M, Chen C-T (2012) Eur J Inorg Chem 4:720–726
Wang W-C, Peng K-F, Chen M-T, Chen C-T (2012) Dalton Trans 41:3022–3029
Tan C, Liu F-S, Shen D-S, Cheng T, Zhou Z-Z (2011) Catal Lett 141:1332–1337
Bakthavachalam K, Rajagopal A, Dastagiri Reddy N (2014) Dalton Trans 43:14816–14823
Lei Y, Chen F, Luo Y, Xu P, Wang Y, Zhang Y (2011) Inorg Chim Acta 368:179–186
Sugihara H, Fukushi H, Miyawaki T, Imai Y, Terashita Z, Kawamura M, Fujisawa Y, Kita S (1998) J Med Chem 41:489–502
Liebeschuetz JW, Jones SD, Morgan PJ, Murray CW, Rimmer AD, Roscoe JME, Waszkowycz B, Welsh PM, Wylie WA, Young SC, Martin H, Mahler J, Brady L, Wilkinson K (2002) J Med Chem 45:1221–1232
Jones SD, Liebeschuetz JW, Morgan PJ, Murray CW, Rimmer AD, Roscoe KME, Waszkowycz B, Welsh PM, Wylie WA, Young SC, Martin H, Mahler J, Brady L, Wilkinson K (2001) Bioorg Med Chem Lett 11:733–736
Acknowledgments
We thank Konstanz University for visiting professorship (to O. V. H.) and Dr. Nikolay Youhnovski for providing ESI mass spectrum measurements. We are grateful to Dr. Agnieszka Dobosz (Wroclaw Medical University, Poland) for carrying out pK a determination. We would like to thank Dr. Svetlana Shishkina for X-ray and computational discussion, and Dr. Andrei Esaulenko (ALSI-CHROM, Kyiv) for ESI–MS analysis discussion.
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Dedicated to the memory of Prof. Oleg V. Shishkin and Prof. Ulrich M. Groth.
Oleg V. Shishkin and Ulrich M. Groth: Deceased.
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Hordiyenko, O.V., Biitseva, A.V., Kostina, Y.Y. et al. The unsubstituted ortho-amidino benzoic acid: crystal structure, characterization and pK a determination. Struct Chem 28, 607–616 (2017). https://doi.org/10.1007/s11224-016-0822-x
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DOI: https://doi.org/10.1007/s11224-016-0822-x