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Identification of Patients with RAG Mutations Previously Diagnosed with Common Variable Immunodeficiency Disorders

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Abstract

Purpose

Combined immunodeficiency (CID) presents a unique challenge to clinicians. Two patients presented with the prior clinical diagnosis of common variable immunodeficiency (CVID) disorder marked by an early age of presentation, opportunistic infections, and persistent lymphopenia. Due to the presence of atypical clinical features, next generation sequencing was applied documenting RAG deficiency in both patients.

Methods

Two different genetic analysis techniques were applied in these patients including whole exome sequencing in one patient and the use of a gene panel designed to target genes known to cause primary immunodeficiency disorders (PIDD) in a second patient. Sanger dideoxy sequencing was used to confirm RAG1 mutations in both patients.

Results

Two young adults with a history of recurrent bacterial sinopulmonary infections, viral infections, and autoimmune disease as well as progressive hypogammaglobulinemia, abnormal antibody responses, lymphopenia and a prior diagnosis of CVID disorder were evaluated. Compound heterozygous mutations in RAG1 (1) c256_257delAA, p86VfsX32 and (2) c1835A>G, pH612R were documented in one patient. Compound heterozygous mutations in RAG1 (1) c.1566G>T, p.W522C and (2) c.2689C>T, p. R897X) were documented in a second patient post-mortem following a fatal opportunistic infection.

Conclusion

Astute clinical judgment in the evaluation of patients with PIDD is necessary. Atypical clinical findings such as early onset, granulomatous disease, or opportunistic infections should support the consideration of atypical forms of late onset CID secondary to RAG deficiency. Next generation sequencing approaches provide powerful tools in the investigation of these patients and may expedite definitive treatments.

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References

  1. Felgentreff, Perez-Becker R, Speckmann C, Schwarz K, et al. Clinical and immunological manifestations of patients with atypical severe combined immunodeficiency. Clin Immunol. 2011;141(1):73–82.

    Article  CAS  PubMed  Google Scholar 

  2. Conley ME, Casanova JL. Discovery of single-gene inborn errors of immunity by next generation sequencing. Curr Opin Immunol. 2014;30C:17–23.

    Article  Google Scholar 

  3. Lee YN, Frugoni F, Dobbs K, Walter JE, et al. A systematic analysis of recombination activity and genotype-phenotype correlation in human recombination-activating gene 1 deficiency. J Allergy Clin Immunol. 2014;133(4):1099–108.

    Article  CAS  PubMed  Google Scholar 

  4. Schwarz K, Gauss GH, Ludwig L, Pannicke U, et al. RAG mutations in human B cell-negative SCID. Science. 1996;274(5284):97–9.

    Article  CAS  PubMed  Google Scholar 

  5. Chen K, Wu W, Mathew D, Zhang Y, et al. Autoimmunity due to RAG deficiency and estimated disease incidence in RAG1/2 mutations. J Allergy Clin Immunol. 2014;133(3):880–2.e10.

  6. Sharapova SO, Migas A, Guryanova I, Aleshkevich S, et al. Late-onset combined immune deficiency associated to skin granuloma due to heterozygous compound mutations in RAG1 gene in a 14 years old male. Hum Immunol. 2013;74(1):118–22.

    Article  Google Scholar 

  7. Pieper K, Rizzi M, Speletas M, Smulski CR, et al. A common single nucleotide polymorphism impairs B-cell activating factor receptor’s multimerization, contributing to common variable immunodeficiency. J Allergy Clin Immunol. 2014;133(4):1222–5.

    Article  CAS  PubMed  Google Scholar 

  8. Kumaki S, Villa A, Asada H, Kawai S, et al. Identification of anti-herpes simplex virus antibody-producing B cells in a patient with an atypical RAG1 immunodeficiency. Blood. 2001;98(5):1464–8.

    Article  CAS  PubMed  Google Scholar 

  9. Villa A, Bozzi F, Sobacchi C, Strina D, et al. Prenatal diagnosis of RAG-deficient Omenn syndrome. Prenat Diagn. 2000;20(1):56–9.

    Article  CAS  PubMed  Google Scholar 

  10. De Ravin SS, Cowen EW, Zarember KA, Whiting-Theobald NL, et al. Hypomorphic RAG mutations can cause destructive midline granulomatous disease. Blood. 2010;116(8):1263–71.

    Article  PubMed Central  PubMed  Google Scholar 

  11. Malphettes M, Gerard L, Carmagnat M, Mouillot G, et al. Late-onset combined immune deficiency: a subset of common variable immunodeficiency with severe T cell defect. Clin Infect Dis. 2009;49(9):1329–38.

    Article  CAS  PubMed  Google Scholar 

  12. Rose CD. Granulomatous inflammation: The overlap of immune deficiency and inflammation. Best Pract Res Clin Rheumatol. 2014;28(2):191–212.

    Article  PubMed  Google Scholar 

  13. de Villartay JP, Lim A, Al-Mousa H, Dupont A, et al. A novel immunodeficiency associated with hypomorphic RAG1 mutations and CMV infection. J Clin Invest. 2005;115(11):3291–9.

    Article  PubMed Central  PubMed  Google Scholar 

  14. Ehl S, Schwarz K, Enders A, Duffner U, et al. A variant of SCID with specific immune responses and predominance of gamma delta T cells. J Clin Invest. 2005;115(11):3140–8.

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  15. Karaca NE, Aksu G, Genel F, Gulez N, et al. Diverse phenotypic and genotypic presentation of RAG1 mutations in two cases with SCID. Clin Exp Med. 2009;9(4):339–42.

    Article  PubMed  Google Scholar 

  16. Schuetz C, Huck K, Gudowius S, Megahed M, et al. An immunodeficiency disease with RAG mutations and granulomas. N Engl J Med. 2008;358(19):2030–8.

    Article  CAS  PubMed  Google Scholar 

  17. Reiff A, Bassuk AG, Church JA, Campbell E, et al. Exome sequencing reveals RAG1 mutations in a child with autoimmunity and sterile chronic multifocal osteomyelitis evolving into disseminated granulomatous disease. J Clin Immunol. 2013;33(8):1289–92.

    Article  PubMed  Google Scholar 

  18. Kuijpers TW, Ijspeert H, van Leeuwen EM, Jansen MH, et al. Idiopathic CD4+ T lymphopenia without autoimmunity or granulomatous disease in the slipstream of RAG mutations. Blood. 2011;117(22):5892–6.

    Article  CAS  PubMed  Google Scholar 

  19. Abraham RS, Recher M, Giliani S, Walter JE, et al. Adult-onset manifestation of idiopathic T-cell lymphopenia due to a heterozygous RAG1 mutation. J Allergy Clin Immunol. 2013;131(5):1421–3.

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  20. Gathmann B, Mahlaoui N, CEREDIH, Gerard L, et al. Clinical picture and treatment of 2212 patients with common variable immunodeficiency. J Allergy Clin Immunol. 2014;134(1):116–26.

    Article  PubMed  Google Scholar 

  21. Abolhassani H, Wang N, Aghamohammadi A, Rezaei N, et al. A hypomorphic recombination-activating gene 1 (RAG1) mutation resulting in a phenotype resembling common variable immunodeficiency. J Allergy Clin Immunol. 2014.

  22. Nijman IJ, van Montfrans JM, Hoogstraat M, Boes ML, et al. Targeted next-generation sequencing: a novel diagnostic tool for primary immunodeficiencies. J Allergy Clin Immunol. 2014;133(2):529–34.

    Article  CAS  PubMed  Google Scholar 

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Acknowledgments

We would like to acknowledge the support of the Intramural Research Program of the NIAID, NIH and the assistance of Julie Niemela for CLIA-confirming the mutation and Helen Matthews for clinical support. The authors are grateful to Helen Su, MD PhD for her clinical and laboratory support as well as her assistance in the preparation of this manuscript. This work was partly supported by the National Institute of Allergy and Infectious Diseases, National Institutes of Health (NIH) (grant no. 5P01AI076210-04 and grant no. U54AI082973 to L.D.N.; grant no. 1K08AI103035-03 to J.E.W.), the Manton Foundation (to L.D.N.), the March of Dimes (grant no. 6-FY10-282 to L.D.N.), the Jeffrey Modell Foundation (to L.D.N.), the Division of Intramural Research, NIAID, NIH (to L.B.R. and S.K.B.), and by the ARUP Institute for Clinical and Experimental Pathology.

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Correspondence to David Buchbinder.

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Buchbinder, D., Baker, R., Lee, Y.N. et al. Identification of Patients with RAG Mutations Previously Diagnosed with Common Variable Immunodeficiency Disorders. J Clin Immunol 35, 119–124 (2015). https://doi.org/10.1007/s10875-014-0121-5

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  • DOI: https://doi.org/10.1007/s10875-014-0121-5

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