Skip to main content

Electron Tomography of Skin

  • Chapter
  • First Online:
Book cover Treatment of Dry Skin Syndrome
  • 2492 Accesses

Abstract

The three-dimensional structure of native skin can be studied by electron tomography of vitreous skin sections (TOVIS) down to a molecular resolution in situ. However, a combination of incomplete and noisy data, a difficult sample preparation procedure, and sensitivity for specimen degradation during data collection presently limit TOVIS’ practical usage within dermatology. Here we pinpoint the major limitations with molecular skin TOVIS and propose some future applications in skin science.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 219.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 279.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 279.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  1. Al-Amoudi A, Castaño-Dieza D, Devosa DP, Russell RB, Johnson GT, Frangakis A (2011) The three-dimensional molecular structure of the desmosomal plaque. PNAS 108(16):6480–6485

    Article  PubMed  CAS  Google Scholar 

  2. Al-Amoudi A, Dıez DC, Betts MJ, Frangakis AS (2007) The molecular architecture of cadherins in native epidermal desmosomes. Nature 450:832–837

    Article  PubMed  CAS  Google Scholar 

  3. Al-Amoudi A, Dubochet J, Norlén L (2005) Nanostructure of the epidermal extracellular space as observed by cryo-electron microscopy of vitreous sections of human skin. J Invest Dermatol 124:764–777

    Article  PubMed  CAS  Google Scholar 

  4. Al-Amoudi, A. Norlén, L. Dubochet, J (2004) Cryo-electron microscopy of vitreous sections of native biological cells and tissues. J Struct Biol. 148(1):131–5

    Article  PubMed  CAS  Google Scholar 

  5. Baker ML, Yu Z, Chiu W, Bajaj C (2006) Automated segmentation of molecular subunits in electron cryomicroscopy density maps. J Struct Biol 156:432–441

    Article  PubMed  CAS  Google Scholar 

  6. Candès EJ (2006) Compressive sampling. Proc. Int. Congress Math, Madrid, Spain, pp 1–20

    Google Scholar 

  7. Cipra BA (2006) l1-magic. SIAM News 39(9)

    Google Scholar 

  8. Fanelli D, Öktem O (2008) Electron tomography: a short review with an emphasis on the absorption potential model for the forward problem. Inverse Problems 24 013001 (51 pp)

    Google Scholar 

  9. Garduno E, Wong-barnum M, Vilkmann N, Ellisman MH (2008) Segmentation of electron tomographic data sets using fuzzy set theory principles. J Struct Biol 162:368–379

    Article  PubMed  Google Scholar 

  10. Gilbert PFC (1972) Iterative methods for the three-dimensional reconstruction of an object from projections. J Theor Biol 36:105–117

    Article  PubMed  CAS  Google Scholar 

  11. Lammerts van Bueren JJ, Bleeker WK, Brännström A, von Euler A, Jansson M, Peipp M, Schneider-Merck T, Valerius T, van de Winkel JBJ, Parren PWHI (2008) The antibody zalutumumab inhibits epidermal growth factor receptor signaling by limiting intra- and intermolecular flexibility. PNAS 105(16):6109–6114

    Article  PubMed  CAS  Google Scholar 

  12. Masich S, Östberg T, Norlén L, Shupliakov O, Daneholt B (2006) A procedure to deposit fiducial markers on vitreous cryo-sections for cellular tomography. J Struct Biol 156:461–468

    Article  PubMed  CAS  Google Scholar 

  13. Norlén L, Al-Amoudi A (2004) Stratum corneum keratin structure, function, and formation: the cubic rod-packing and membrane templating model. J Invest Dermatol 123(4):715–732

    Article  PubMed  Google Scholar 

  14. Norlén L, Al-Amoudi A, Dubochet J (2003) A cryo-transmission electron microscopy study of skin barrier formation. J Invest Dermatol 120:555–560

    Article  PubMed  Google Scholar 

  15. Norlén L, Öktem O, Skoglund U (2009) Molecular cryo-electron tomography of vitreous tissue sections: current challenges. J Microsc 235:293–307

    Article  PubMed  Google Scholar 

  16. Penczek PA, Frank J (2006) Resolution in electron tomography, Chapter 10. In: Frank J (ed) Electron tomography – methods for three-dimensional visualization of structures in the cell, 2nd edn. Springer, New York, pp 307–330

    Google Scholar 

  17. Quinto ET, Öktem O (2008) Local tomography in electron microscopy. SIAM J Appl Math 68(5):1282–1303

    Article  CAS  Google Scholar 

  18. Radermacher M (1988) Three-dimensional reconstruction of single particles from random and nonrandom tilt series. J Electron Microsc Tech 9:359–394

    Article  PubMed  CAS  Google Scholar 

  19. Radermacher M (1992) Weighted back-projection methods. In: Frank J (ed) Electron tomography – three-dimensional imaging with the transmission electron microscope, Chapter 5. Plenum Press, New York

    Google Scholar 

  20. Ramachandran GN, Lakshminarayanan AV (1971) Three-dimensional reconstruction from radiographs and electron micrographs: application of convolutions instead of Fourier transforms. Proc Natl Acad Sci USA 68:2236–2240

    Article  PubMed  CAS  Google Scholar 

  21. Rullgård H (2008) A new principle for choosing regularization parameter in certain inverse problems. arXiv:0803.3713v2

    Google Scholar 

  22. Rullgård, H. Öktem, O. Skoglund, U (2007) A componentwise iterative relative entropyregularization method with updated prior and regularization parameter. Inverse Problems 23:2121–2139

    Google Scholar 

  23. Rullgård, H. Öfverstedt, L-G. Masich, S. Daneholt, B. Öktem, O (2011) Simulation of transmission electron microscope images of biological specimens. J. Microscopy 243(3):234–256

    Google Scholar 

  24. Svensson S (2007) A decomposition scheme for 3D fuzzy objects based on fuzzy distance information. Pattern Recognit Lett 28:224–232

    Article  Google Scholar 

  25. Tokuyasu KT (1973) A technique for ultracryotomy of cell suspensions and tissues. J Cell Biol 57:551–565

    Article  PubMed  CAS  Google Scholar 

  26. Trabuco LG, Villa E, Mitra K, Frank J, Schulten K (2008) Flexible fitting of atomic structures into electron microscopy maps using molecular dynamics. Structure 16(5):673–683

    Article  PubMed  CAS  Google Scholar 

  27. Vainshtein BK (1970) Finding the structure of objects from projections. Krystallograftya 15:894–902; Vainshtein BK (1970) Crystallography 15:781–787 (Transl. in Soviet Physics)

    Google Scholar 

  28. Volkmann N (2002) A novel three-dimensional variant of the watershed transform for segmentation of electron density maps. J Struct Biol 138:123–129

    Article  PubMed  CAS  Google Scholar 

  29. Wriggers W (2004) Spanning the length scales of biomolecular simulation. Structure 12(1):1–2

    Article  PubMed  CAS  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Lars Norlén .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2012 Springer-Verlag Berlin Heidelberg

About this chapter

Cite this chapter

Norlén, L. (2012). Electron Tomography of Skin. In: Lodén, M., Maibach, H. (eds) Treatment of Dry Skin Syndrome. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-642-27606-4_8

Download citation

  • DOI: https://doi.org/10.1007/978-3-642-27606-4_8

  • Published:

  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-642-27605-7

  • Online ISBN: 978-3-642-27606-4

  • eBook Packages: MedicineMedicine (R0)

Publish with us

Policies and ethics