Abstract
It was known since the 1960’s that various denitrifying bacteria generate NO as an intermediate product of their dissimilatory NO3 − metabolism (Mar Biol 1:136–139, 1967; J Bacteriol 106:356–361, 1971; Appl Environ Microbiol 31:504–508, 1976). Today several prokaryote species are known as NO producers; many of them synthesize NO by reduction of NO2 −, while others contain NOS-like enzymes and show oxidative NO generation from L-arginine or Nω-hydroxy-L-arginine (Arch Microbiol 160:253–264, 1993; Trends Microbiol 17:212–218, 2009; Annu Rev Biochem 79:445–470, 2010). Various ecological niches house these NO producer prokaryotes: marine environments (Int J Syst Bacteriol 33:857–865, 1983; Int J Syst Evol Microbiol 55:919–924, 2005; Int J Syst Evol Microbiol 56:2153–2156, 2006; Mem Inst Oswaldo Cruz 104:678–682, 2009; Res Microbiol 161:604–612, 2010), poorly ventilated or flooded soils (Mol Biol Rev 61:533–616, 1997), contaminated and eutrophized waters (Shapleigh J The denitrifying prokaryotes. In: Dworkin M, Falkow S, Rosenberg E, Schleifer K-H, Stackebrandt E (eds) The Prokaryotes. Springer, New York, pp. 769–792, 2006; Water Environ Res 79:2499–2509, 2007; Water Res 42:812–826, 2008), fermented meat or milk products (J Bacteriol 179:7812–7815, 1997; Eur Food Res Technol 223:35–38, 2006; Int J Food Microbiol 120:303–310, 2007) and the surface of mucosal barriers (New Horiz 3:352–364, 1995; Inflammation 21:443–450, 1997) are all colonized by NO synthesizing bacteria.
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Notes
- 1.
Mitochondria of fungi also contain denitrifying enzymes.
- 2.
The literature uses the “Nos” abbreviation to indicate nitrous oxide reductase. However we have reserved the “NOS” acronym for NO-synthase in this book. To avoid the confusion of these two distinct enzymes, we have applied the “N2OR” abbreviation for nitrous oxide reductase.
Bibliography
Agapie T, Suseno S, Woodward JJ, Stoll S, Britt RD, Marletta MA (2009) NO formation by a catalytically self-sufficient bacterial nitric oxide synthase from Sorangium cellulosum. Proc Natl Acad Sci USA 106:16221–16226
Ahmed A, Lewis RS (2007) Fermentation of biomass-generated synthesis gas: effects of nitric oxide. Biotechnol Bioeng 97:1080–1086
Asanuma K, Iijima K, Sugata H, Ohara S, Shimosegawa T, Yoshimura T (2005) Diffusion of cytotoxic concentrations of nitric oxide generated luminally at the gastro-oesophageal junction of rats. Gut 54:1072–1077
Aurer A, Aleksic J, Ivic-Kardum M, Aurer J, Culo F (2001) Nitric oxide synthesis is decreased in periodontitis. J Clin Periodontol 28:565–568
Balderston WL, Sherr B, Payne WJ (1976) Blockage by acetylene of nitrous oxide reduction in Pseudomonas perfectomarinus. Appl Environ Microbiol 31:504–508
Barbaree JM, Payne WJ (1967) Products of denitrification by a marine bacterium as revealed by gas chromatography. Mar Biol 1:136–139
Barbier B, Bertrand M, Boillot F, Chabin A, Chaput D, Henin O, Brack A (1998) Delivery of extraterrestrial amino acids to the primitive earth. Exposure experiments in earth orbit. Biol Sci Space 12:92–95
Bartossek R, Nicol GW, Lanzen A, Klenk HP, Schleper C (2010) Homologues of nitrite reductases in ammonia-oxidizing archaea: diversity and genomic context. Environ Microbiol 12:1075–1088
Bastian NR, Foster MJ, Pope JC (1995) Nitric oxide stabilizes the Mo(V) oxidation state of dimethyl sulfoxide reductase from Rhodobacter sphaeroides without inhibiting enzyme activity. Biofactors 5:5–10
Baumann P, Bowditch RD, Baumann L, Beamin B (1983) Taxonomy of marine Pseudomonas species: P. stanieri sp. nov., P. perfectomarina sp. nov., nom. rev.; P. nautica; and P. doudoroffii. Int J Syst Bacteriol 33:857–865
Baumgärtner M, Remde A, Bock E, Conrad R (1990) Release of nitric oxide from building stones into the atmosphere. Atmos Environ Part B: Urban Atmos 24:87–92
Bayindir YZ, Polat MF, Seven N (2005) Nitric oxide concentrations in saliva and dental plaque in relation to caries experience and oral hygiene. Caries Res 39:130–133
Beaumont HJ, Hommes NG, Sayavedra-Soto LA, Arp DJ, Arciero DM, Hooper AB, Westerhoff HV, van Spanning RJ (2002) Nitrite reductase of Nitrosomonas europaea is not essential for production of gaseous nitrogen oxides and confers tolerance to nitrite. J Bacteriol 184:2557–2560
Beaumont HJ, Lens SI, Reijnders WN, Westerhoff HV, van Spanning RJ (2004) Expression of nitrite reductase in Nitrosomonas europaea involves NsrR, a novel nitrite-sensitive transcription repressor. Mol Microbiol 54:148–158
Beaumont HJ, Lens SI, Westerhoff HV, van Spanning RJ (2005) Novel nirK cluster genes in Nitrosomonas europaea are required for NirK-dependent tolerance to nitrite. J Bacteriol 187:6849–6851
Benjamin N, O’Driscoll F, Dougall H, Duncan C, Smith L, Golden M, McKenzie H (1994) Stomach NO synthesis. Nature 368:502
Bock E (1987) Biologisch induzierte Korrosion von Natursteinstarker Befall mit Nitrifikanten. Bautenschutz Bausanierung 10(1):24–27
Brantner C, Remsen C, Owen H, Buchholz L, Collins M (2002) Intracellular localization of the particulate methane monooxygenase and methanol dehydrogenase in Methylomicrobium album BG8. Arch Microbiol 178:59–64
Busch A, Friedrich B, Cramm R (2002) Characterization of the norB gene, encoding nitric oxide reductase, in the nondenitrifying cyanobacterium Synechocystis sp. strain PCC6803. Appl Environ Microbiol 68:668–672
Cabello P, Roldan MD, Moreno-Vivian C (2004) Nitrate reduction and the nitrogen cycle in archaea. Microbiology 150:3527–3546
Cantera JJ, Stein LY (2007a) Molecular diversity of nitrite reductase genes (nirK) in nitrifying bacteria. Environ Microbiol 9:765–776
Cantera JJ, Stein LY (2007b) Role of nitrite reductase in the ammonia-oxidizing pathway of Nitrosomonas europaea. Arch Microbiol 188:349–354
Castello PR, David PS, McClure T, Crook Z, Poyton RO (2006) Mitochondrial cytochrome oxidase produces nitric oxide under hypoxic conditions: implications for oxygen sensing and hypoxic signaling in eukaryotes. Cell Metab 3:277–287
Castello PR, Woo DK, Ball K, Wojcik J, Liu L, Poyton RO (2008) Oxygen-regulated isoforms of cytochrome c oxidase have differential effects on its nitric oxide production and on hypoxic signaling. Proc Natl Acad Sci USA 105:8203–8208
Chen Y, Rosazza JP (1994) A bacterial nitric oxide synthase from a Nocardia species. Biochem Biophys Res Commun 203:1251–1258
Chen Y, Rosazza JP (1995) Purification and characterization of nitric oxide synthase (NOSNoc) from a Nocardia species. J Bacteriol 177:5122–5128
Choi DW, Oh HY, Hong SY, Han JW, Lee HW (2000) Identification and characterization of nitric oxide synthase in Salmonella typhimurium. Arch Pharm Res 23:407–412
Choi PS, Naal Z, Moore C, Casado-Rivera E, Abruna HD, Helmann JD, Shapleigh JP (2006) Assessing the impact of denitrifier-produced nitric oxide on other bacteria. Appl Environ Microbiol 72:2200–2205
Cohen MF, Yamasaki H (2003) Involvement of nitric oxide synthase in sucrose-enhanced hydrogen peroxide tolerance of Rhodococcus sp. strain APG1, a plant-colonizing bacterium. Nitric Oxide 9:1–9
Coyne MS, Arunakumari A, Pankratz HS, Tiedje JM (1990) Localization of the cytochrome cd1 and copper nitrite reductases in denitrifying bacteria. J Bacteriol 172:2558–2562
Cramm R, Busch A, Strube K (2006) NO-dependent transcriptional activation of gene expression in Ralstonia eutropha H16. Biochem Soc Trans 34:182–184
Crane BR, Sudhamsu J, Patel BA (2010) Bacterial nitric oxide synthases. Annu Rev Biochem 79:445–470
Cross R, Lloyd D, Poole RK, Moir JW (2001) Enzymatic removal of nitric oxide catalyzed by cytochrome c′ in Rhodobacter capsulatus. J Bacteriol 183:3050–3054
Cuzzolin L, Adami A, Crivellente F, Benoni G (1997) Role of endogenous and exogenous nitric oxide on intestinal mucosa and microflora in the rat. Inflammation 21:443–450
de Sa Siqueira MA, Fischer RG, da Silva Figueredo CM, Brunini TM, Mendes-Ribeiro AC (2010) Nitric oxide and oral diseases: can we talk about it? Cardiovasc Hematol Agents Med Chem 8:104–112
Del Giudice J, Cam Y, Damiani I, Fung-Chat F, Meilhoc E, Bruand C, Brouquisse R, Puppo A, Boscari A (2011) Nitric oxide is required for an optimal establishment of the Medicago truncatula-Sinorhizobium meliloti symbiosis. New Phytol 191:405–417
Doel JJ, Benjamin N, Hector MP, Rogers M, Allaker RP (2005) Evaluation of bacterial nitrate reduction in the human oral cavity. Eur J Oral Sci 113:14–19
Dougall HT, Smith L, Duncan C, Benjamin N (1995) The effect of amoxycillin on salivary nitrite concentrations: an important mechanism of adverse reactions? Br J Clin Pharmacol 39:460–462
Ducluzeau AL, van Lis R, Duval S, Schoepp-Cothenet B, Russell MJ, Nitschke W (2009) Was nitric oxide the first deep electron sink? Trends Biochem Sci 34:9–15
Duncan C, Dougall H, Johnston P, Green S, Brogan R, Leifert C, Smith L, Golden M, Benjamin N (1995) Chemical generation of nitric oxide in the mouth from the enterosalivary circulation of dietary nitrate. Nat Med 1:546–551
Engel HH, Macko SA (2001) The stereochemistry of amino acids in the Murchison meteorite. Precambrian Res 106:35–45
Ettwig KF, Butler MK, Le Paslier D, Pelletier E, Mangenot S, Kuypers MMM, Schreiber F, Dutilh BE, Zedelius J, de Beer D, Gloerich J, Wessels HJCT, van Alen T, Luesken F, Wu ML, van de Pas-Schoonen KT, Op den Camp HJM, Janssen-Megens EM, Francoijs K-J, Stunnenberg H, Weissenbach J, Jetten MSM, Strous M (2010) Nitrite-driven anaerobic methane oxidation by oxygenic bacteria. Nature 464:543–548
Forrester MT, Eyler CE, Rich JN (2011) Bacterial flavohemoglobin: a molecular tool to probe mammalian nitric oxide biology. Biotechniques 50:41–45
Fritsch P, de Saint Blanquat G, Klein D (1985) Excretion of nitrates and nitrites in saliva and bile in the dog. Food Chem Toxicol 23:655–659
Gao X, Liu Y, Zheng H, Liu Z (2010) Identification and characteristics of a marine aerobic denitrifying bacterium. Wei Sheng Wu Xue Bao 50:1164–1171
Gardner PR, Gardner AM, Martin LA, Salzman AL (1998) Nitric oxide dioxygenase: an enzymic function for flavohemoglobin. Proc Natl Acad Sci USA 95:10378–10383
Genc MR, Delaney ML, Onderdonk AB, Witkin SS (2006) Vaginal nitric oxide in pregnant women with bacterial vaginosis. Am J Reprod Immunol 56:86–90
Gonzalez PJ, Correia C, Moura I, Brondino CD, Moura JJ (2006) Bacterial nitrate reductases: molecular and biological aspects of nitrate reduction. J Inorg Biochem 100:1015–1023
Gotterup J, Olsen K, Knochel S, Tjener K, Stahnke LH, Moller JK (2007) Relationship between nitrate/nitrite reductase activities in meat associated staphylococci and nitrosylmyoglobin formation in a cured meat model system. Int J Food Microbiol 120:303–310
Gündoğdu A, Karahan A, Çakmakç M (2006) Production of nitric oxide (NO) by lactic acid bacteria isolated from fermented products. Eur Food Res Technol 223:35–38
Gusarov I, Nudler E (2005) NO-mediated cytoprotection: instant adaptation to oxidative stress in bacteria. Proc Natl Acad Sci USA 102:13855–13860
Gusarov I, Shatalin K, Starodubtseva M, Nudler E (2009) Endogenous nitric oxide protects bacteria against a wide spectrum of antibiotics. Science 325:1380–1384
Gyurko R, Boustany G, Huang PL, Kantarci A, Van Dyke TE, Genco CA, Gibson FC 3rd (2003) Mice lacking inducible nitric oxide synthase demonstrate impaired killing of Porphyromonas gingivalis. Infect Immun 71:4917–4924
Hallin S, Lindgren P-E (1999) PCR detection of genes encoding nitrite reductase in denitrifying bacteria. Appl Environ Microbiol 65:1652–1657
Hausladen A, Gow AJ, Stamler JS (1998) Nitrosative stress: metabolic pathway involving the flavohemoglobin. Proc Natl Acad Sci USA 95:14100–14105
He A, Rosazza JP (2003) GTP cyclohydrolase I: purification, characterization, and effects of inhibition on nitric oxide synthase in nocardia species. Appl Environ Microbiol 69:7507–7513
Hecker M, Walsh DT, Vane JR (1991) On the substrate specificity of nitric oxide synthase. FEBS Lett 294:221–224
Hendriks J, Gohlke U, Saraste M (1998) From NO to OO: nitric oxide and dioxygen in bacterial respiration. J Bioenerg Biomembr 30:15–24
Henry S, Bru D, Stres B, Hallet S, Philippot L (2006) Quantitative detection of the nosZ gene, encoding nitrous oxide reductase, and comparison of the abundances of 16S rRNA, narG, nirK, and nosZ genes in soils. Appl Environ Microbiol 72:5181–5189
Herrmann JM, Kauff F, Neuhaus HE (2009) Thiol oxidation in bacteria, mitochondria and chloroplasts: common principles but three unrelated machineries? Biochimica et Biophysica Acta (BBA)—Mol Cell Res 1793:71–77
Hill DR, Belbin TJ, Thorsteinsson MV, Bassam D, Brass S, Ernst A, Boger P, Paerl H, Mulligan ME, Potts M (1996) GlbN (cyanoglobin) is a peripheral membrane protein that is restricted to certain Nostoc spp. J Bacteriol 178:6587–6598
Hino T, Matsumoto Y, Nagano S, Sugimoto H, Fukumori Y, Murata T, Iwata S, Shiro Y (2010) Structural basis of biological N2O generation by bacterial nitric oxide reductase. Science 330:1666–1670
Hird FJ (1986) The importance of arginine in evolution. Comp Biochem Physiol B 85:285–288
Horchani F, Prevot M, Boscari A, Evangelisti E, Meilhoc E, Bruand C, Raymond P, Boncompagni E, Aschi-Smiti S, Puppo A, Brouquisse R (2011) Both plant and bacterial nitrate reductases contribute to nitric oxide production in Medicago truncatula nitrogen-fixing nodules. Plant Physiol 155:1023–1036
Hu Y, Xia W, Ge C (2007) Effect of mixed starter cultures fermentation on the characteristics of silver carp sausages. World J Microbiol Biotechnol 23:1021–1031
Jaegle L, Martin R, Chance K, Steinberger L, Kurosu L, Jacob J, Modi A, Yoboue V, Sigha-Nkamdjou L, Galy-Lacaux C (2004) Satellite mapping of rain-induced nitric oxide emissions from soils. J Geophys Res 109:14
Kampschreur MJ, Picioreanu C, Tan N, Kleerebezem R, Jetten MS, van Loosdrecht MC (2007) Unraveling the source of nitric oxide emission during nitrification. Water Environ Res 79:2499–2509
Kampschreur MJ, Van Der Star WR, Wielders HA, Mulder JW, Jetten MS, van Loosdrecht MC (2008) Dynamics of nitric oxide and nitrous oxide emission during full-scale reject water treatment. Water Res 42:812–826
Kampschreur MJ, Poldermans R, Kleerebezem R, Van Der Star WR, Haarhuis R, Abma WR, Jetten MS, van Loosdrecht MC (2009) Emission of nitrous oxide and nitric oxide from a full-scale single-stage nitritation-anammox reactor. Water Sci Technol 60:3211–3217
Kappler U, Huston WM, McEwan AG (2002) Control of dimethylsulfoxide reductase expression in Rhodobacter capsulatus: the role of carbon metabolites and the response regulators DorR and RegA. Microbiology 148:605–614
Kartal B, Kuypers MM, Lavik G, Schalk J, Op den Camp HJ, Jetten MS, Strous M (2007) Anammox bacteria disguised as denitrifiers: nitrate reduction to dinitrogen gas via nitrite and ammonium. Environ Microbiol 9:635–642
Kartal B, Tan NC, Van de Biezen E, Kampschreur MJ, Van Loosdrecht MC, Jetten MS (2010) Effect of nitric oxide on anammox bacteria. Appl Environ Microbiol 76:6304–6306
Khouw BT, McCurdy HD (1969) Tricarboxylic acid cycle enzymes and morphogenesis in Blastocladiella emersonii. J Bacteriol 99:197–205
Korner H, Mayer F (1992) Periplasmic location of nitrous oxide reductase and its apoform in denitrifying Pseudomonas stutzeri. Arch Microbiol 157:218–222
Krämer M, Conrad R (1991) Influence of oxygen on production and consumption of nitric oxide in soil. Biol Fertil Soils 11:38–42
Kvenvolden K, Lawless J, Pering K, Peterson E, Flores J, Ponnamperuma C, Kaplan IR, Moore C (1970) Evidence for extraterrestrial amino-acids and hydrocarbons in the Murchison meteorite. Nature 228:923–926
Lalucat J, Bennasar A, Bosch R, Garcia-Valdes E, Palleroni NJ (2006) Biology of Pseudomonas stutzeri. Microbiol Mol Biol Rev 70:510–547
Lam P, Lavik G, Jensen MM, van de Vossenberg J, Schmid M, Woebken D, Gutierrez D, Amann R, Jetten MS, Kuypers MM (2009) Revising the nitrogen cycle in the Peruvian oxygen minimum zone. Proc Natl Acad Sci USA 106:4752–4757
Lamm AS, Khare A, Conville P, Lau PC, Bergeron H, Rosazza JP (2009) Nocardia iowensis sp. nov., an organism rich in biocatalytically important enzymes and nitric oxide synthase. Int J Syst Evol Microbiol 59:2408–2414
Lee S, Bergeron H, Lau PC, Rosazza JP (2007) Thiols in nitric oxide synthase-containing Nocardia sp. strain NRRL 5646. Appl Environ Microbiol 73:3095–3097
Li H, Duncan C, Townend J, Killham K, Smith LM, Johnston P, Dykhuizen R, Kelly D, Golden M, Benjamin N, Leifert C (1997) Nitrate-reducing bacteria on rat tongues. Appl Environ Microbiol 63:924–930
Liu MC, Payne WJ, Peck HD Jr, LeGall J (1983) Comparison of cytochromes from anaerobically and aerobically grown cells of Pseudomonas perfectomarinus. J Bacteriol 154:278–286
Marinho PR, Moreira AP, Pellegrino FL, Muricy G, Bastos Mdo C, Santos KR, Giambiagi-deMarval M, Laport MS (2009) Marine Pseudomonas putida: a potential source of antimicrobial substances against antibiotic-resistant bacteria. Mem Inst Oswaldo Cruz 104:678–682
Martinez-Espinosa RM, Cole JA, Richardson DJ, Watmough NJ (2011) Enzymology and ecology of the nitrogen cycle. Biochem Soc Trans 39:175–178
Matsubara T, Zumft WG (1982) Identification of a copper protein as part of the nitrous oxide-reducing system in nitrite-respiring (denitrifying) pseudomonads. Arch Microbiol 132:322–328
Matthies C, Griesshammer A, Schmittroth M, Drake HL (1999) Evidence for involvement of gut-associated denitrifying bacteria in emission of nitrous oxide (N(2)O) by earthworms obtained from garden and forest soils. Appl Environ Microbiol 65:3599–3604
McDonald GD, Storrie-Lombardi MC (2010) Biochemical constraints in a protobiotic earth devoid of basic amino acids: the “BAA(-) world”. Astrobiology 10:989–1000
McEwan AG, Ferguson SJ, Jackson JB (1991) Purification and properties of dimethyl sulphoxide reductase from Rhodobacter capsulatus. A periplasmic molybdoenzyme. Biochem J 274(Pt 1):305–307
McKnight GM, Smith LM, Drummond RS, Duncan CW, Golden M, Benjamin N (1997) Chemical synthesis of nitric oxide in the stomach from dietary nitrate in humans. Gut 40:211–214
McNamara CJ, Perry TDt, Bearce KA, Hernandez-Duque G, Mitchell R (2006) Epilithic and endolithic bacterial communities in limestone from a Maya archaeological site. Microb Ecol 51:51–64
Meiklejohn J (1950) The isolation of Nitrosomonas europaea in pure culture. J Gen Microbiol 4:185–191
Meincke M, Krieg E, Bock E (1989) Nitrosovibrio spp., the dominant ammonia-oxidizing bacteria in building sandstone. Appl Environ Microbiol 55:2108–2110
Miller SL (1986) Current status of the prebiotic synthesis of small molecules. Chem Scr 26B:5–11
Mitsui T, Kondo T (1998) Effects of mouth cleansing on the levels of exhaled nitrous oxide in young and older adults. Sci Total Environ 224:177–180
Mitsui T, Kondo T (1999) Vegetables, high nitrate foods, increased breath nitrous oxide. Dig Dis Sci 44:1216–1219
Molina-Favero C, Creus CM, Simontacchi M, Puntarulo S, Lamattina L (2008) Aerobic nitric oxide production by Azospirillum brasilense Sp245 and its influence on root architecture in tomato. Mol Plant Microbe Interact 21:1001–1009
Møller JKS, Jensen JS, Skibsted LH, Knöchel S (2003) Microbial formation of nitrite-cured pigment, nitrosylmyoglobin, from metmyoglobin in model systems and smoked fermented sausages by Lactobacillus fermentum strains and a commercial starter culture. Eur Food Res Technol 216:463–469
Montgomery HJ, Dupont AL, Leivo HE, Guillemette JG (2010) Cloning, expression, and purification of a nitric oxide synthase-like protein from Bacillus cereus. Biochem Res Int 2010:489–892
Moreno-Vivian C, Cabello P, Martinez-Luque M, Blasco R, Castillo F (1999) Prokaryotic nitrate reduction: molecular properties and functional distinction among bacterial nitrate reductases. J Bacteriol 181:6573–6584
Morita H, Yoshikawa H, Sakata R, Nagata Y, Tanaka H (1997) Synthesis of nitric oxide from the two equivalent guanidino nitrogens of L-arginine by Lactobacillus fermentum. J Bacteriol 179:7812–7815
Nakanishi Y, Zhou S, Kim SW, Fushinobu S, Maruyama J, Kitamoto K, Wakagi T, Shoun H (2010) A eukaryotic copper-containing nitrite reductase derived from a NirK homolog gene of Aspergillus oryzae. Biosci Biotechnol Biochem 74:984–991
Nisbet EG, Sleep NH (2001) The habitat and nature of early life. Nature 409:1083–1091
Ohashi M, Iwase M, Nagumo M (1999) Elevated production of salivary nitric oxide in oral mucosal diseases. J Oral Pathol Med 28:355–359
Okutman Tas D, Pavlostathis S (2010) Microbial transformation of pentachloronitrobenzene under nitrate reducing conditions. Biodegradation 21:691–702
Ormerod JO, Ashrafian H, Maher AR, Arif S, Steeples V, Born GV, Egginton S, Feelisch M, Watkins H, Frenneaux MP (2011) The role of vascular myoglobin in nitrite-mediated blood vessel relaxation. Cardiovasc Res 89:560–565
Parwani S, Chitnis P, Parwani R (2011) Salivary nitric oxide levels in inflammatory periodontal disease—a case-control and interventional study. Int J Dent Hyg (in press)
Payne WJ, Riley PS, Cox CD Jr (1971) Separate nitrite, nitric oxide, and nitrous oxide reducing fractions from Pseudomonas perfectomarinus. J Bacteriol 106:356–361
Petrova L, Varshalomidze O, Shelud’ko A, Katsy E (2010) Localization of denitrification genes in plasmid DNA of bacteria Azospirillum brasilense Russ J Genet 46:801–807
Pohlmann A, Cramm R, Schmelz K, Friedrich B (2000) A novel NO-responding regulator controls the reduction of nitric oxide in Ralstonia eutropha. Mol Microbiol 38:626–638
Poyton RO, Castello PR, Ball KA, Woo DK, Pan N (2009) Mitochondria and hypoxic signaling: a new view. Ann N Y Acad Sci 1177:48–56
Prousek J (2007) Fenton chemistry in biology and medicine. Pure Appl Chem 79:13
Remde A, Conrad R (1990) Production of nitric oxide in Nitrosomonas europaea by reduction of nitrite. Arch Microbiol 154:187–191
Remde A, Conrad R (1991) Role of nitrification and denitrification for NO metabolism in soil. Biogeochemistry 12:189–205
Remde A, Ludwig J, Meixner FX, Conrad R (1993) A study to explain the emission of nitric oxide from a marsh soil. J Atmos Chem 17:249–275
Richardson DJ, Berks BC, Russell DA, Spiro S, Taylor CJ (2001) Functional, biochemical and genetic diversity of prokaryotic nitrate reductases. Cell Mol Life Sci 58:165–178
Risgaard-Petersen N, Langezaal AM, Ingvardsen S, Schmid MC, Jetten MS, Op den Camp HJ, Derksen JW, Pina-Ochoa E, Eriksson SP, Nielsen LP, Revsbech NP, Cedhagen T, Van Der Zwaan GJ (2006) Evidence for complete denitrification in a benthic foraminifer. Nature 443:93–96
Ritchie GA, Nicholas DJ (1974) The partial characterization of purified nitrite reductase and hydroxylamine oxidase from Nitrosomonas europaea. Biochem J 138:471–480
Romanenko LA, Uchino M, Falsen E, Frolova GM, Zhukova NV, Mikhailov VV (2005) Pseudomonas pachastrellae sp. nov., isolated from a marine sponge. Int J Syst Evol Microbiol 55:919–924
Rőszer T, Kiss-Tóth É, Petkó M, Szentmiklósi AJ, Bánfalvi G (2006) Phe-met-arg-phe (FMRF)-amide is a substrate source of NO synthase in the gastropod nervous system. Cell Tissue Res 325:567–575
Sabaty M, Schwintner C, Cahors S, Richaud P, Vermeglio A (1999) Nitrite and nitrous oxide reductase regulation by nitrogen oxides in Rhodobacter sphaeroides f. sp. denitrificans IL106. J Bacteriol 181:6028–6032
Salzman AL (1995) Nitric oxide in the gut. New Horiz 3:352–364
Sand W, Bock E (1991) Biodeterioration of mineral materials by microorganisms—biogenic sulfuric and nitric acid corrosion of concrete and natural stone. Geomicrobiol J 9(2,3):129–138
Santos OC, Pontes PV, Santos JF, Muricy G, Giambiagi-deMarval M, Laport MS (2010) Isolation, characterization and phylogeny of sponge-associated bacteria with antimicrobial activities from Brazil. Res Microbiol 161:604–612
Sari MA, Moali C, Boucher JL, Jaouen M, Mansuy D (1998) Detection of a nitric oxide synthase possibly involved in the regulation of the Rhodococcus sp R312 nitrile hydratase. Biochem Biophys Res Commun 250:364–368
Schmidt I, Hermelink C, van de Pas-Schoonen K, Strous M, op den Camp HJ, Kuenen JG, Jetten MS (2002) Anaerobic ammonia oxidation in the presence of nitrogen oxides (NO(x)) by two different lithotrophs. Appl Environ Microbiol 68:5351–5357
Schreiber F, Polerecky L, de Beer D (2008) Nitric oxide microsensor for high spatial resolution measurements in biofilms and sediments. Anal Chem 80:1152–1158
Shank JL, Silliker JH, Harper RH (1962) The effect of nitric oxide on bacteria. Appl Microbiol 10:185–189
Shapiro AD (2005) Nitric oxide signaling in plants. Vitam Horm 72:339–398
Shapleigh J (2006) The denitrifying prokaryotes. In: Dworkin M, Falkow S, Rosenberg E, Schleifer K-H, Stackebrandt E (eds) The prokaryotes. Springer, New York, pp 769–792
Shapleigh JP (2008) Dissimilatory and assimilatory nitrate reduction in the purple photosynthetic bacteria. In: Hunter CN, Daldal F, Thurnauer MC, Beatty JT (eds) The purple phototrophic bacteria. Springer, Netherlands, pp 623–642
Sharma VS, Isaacson RA, John ME, Waterman MR, Chevion M (1983) Reaction of nitric oxide with heme proteins: studies on metmyoglobin, opossum methemoglobin, and microperoxidase. Biochemistry 22:3897–3902
Shiva S, Rassaf T, Patel RP, Gladwin MT (2011) The detection of the nitrite reductase and NO-generating properties of haemoglobin by mitochondrial inhibition. Cardiovasc Res 89:566–573
Simon J (2002) Enzymology and bioenergetics of respiratory nitrite ammonification. FEMS Microbiol Rev 26:285–309
Simpson PJL, Richardson DJ, Codd R (2010) The periplasmic nitrate reductase in Shewanella: the resolution, distribution and functional implications of two NAP isoforms, NapEDABC and NapDAGHB. Microbiology 156:302–312
Skaleric U, Gaspirc B, McCartney-Francis N, Masera A, Wahl SM (2006) Proinflammatory and antimicrobial nitric oxide in gingival fluid of diabetic patients with periodontal disease. Infect Immun 74:7010–7013
Smagghe BJ, Trent JT 3rd, Hargrove MS (2008) NO dioxygenase activity in hemoglobins is ubiquitous in vitro, but limited by reduction in vivo. PLoS One 3:e2039
Son JK, Rosazza JP (2000) Cyclic guanosine-3′,5′-monophosphate and biopteridine biosynthesis in Nocardia sp. J Bacteriol 182:3644–3648
Starkenburg SR, Arp DJ, Bottomley PJ (2008) Expression of a putative nitrite reductase and the reversible inhibition of nitrite-dependent respiration by nitric oxide in Nitrobacter winogradskyi Nb-255. Environ Microbiol 10:3036–3042
Strous M, Pelletier E, Mangenot S, Rattei T, Lehner A, Taylor MW, Horn M, Daims H, Bartol-Mavel D, Wincker P, Barbe V, Fonknechten N, Vallenet D, Segurens B, Schenowitz-Truong C, Medigue C, Collingro A, Snel B, Dutilh BE, Op den Camp HJ, Van Der Drift C, Cirpus I, van de Pas-Schoonen KT, Harhangi HR, van Niftrik L, Schmid M, Keltjens J, van de Vossenberg J, Kartal B, Meier H, Frishman D, Huynen MA, Mewes HW, Weissenbach J, Jetten MS, Wagner M, Le Paslier D (2006) Deciphering the evolution and metabolism of an anammox bacterium from a community genome. Nature 440:790–794
Sturms R, Dispirito AA, Hargrove MS (2011) Plant and cyanobacterial hemoglobins reduce nitrite to nitric oxide under anoxic conditions. Biochemistry 50:3873–3878
Stüven R, Bock E (2001) Nitrification and denitrification as a source for NO and NO2 production in high-strength wastewater. Water Res 35:1905–1914
Sudhamsu J, Crane BR (2009) Bacterial nitric oxide synthases: what are they good for? Trends Microbiol 17:212–218
Sun W, Wu J, Lin L, Huang Y, Chen Q, Ji Y (2010) Porphyromonas gingivalis stimulates the release of nitric oxide by inducing expression of inducible nitric oxide synthases and inhibiting endothelial nitric oxide synthases. J Periodontal Res 45:381–388
Tas DO, Pavlostathis SG (2008) Effect of nitrate reduction on the microbial reductive transformation of pentachloronitrobenzene. Environ Sci Technol 42:3234–3240
Thorsteinsson MV, Bevan DR, Potts M, Dou Y, Eich RF, Hargrove MS, Gibson QH, Olson JS (1999) A cyanobacterial hemoglobin with unusual ligand binding kinetics and stability properties. Biochemistry 38:2117–2126
Tiso M, Tejero J, Basu S, Azarov I, Wang X, Simplaceanu V, Frizzell S, Jayaraman T, Geary L, Shapiro C, Ho C, Shiva S, Kim-Shapiro DB, Gladwin MT (2011) Human neuroglobin functions as a redox-regulated nitrite reductase. J Biol Chem 286:18277–18289
Tsai AL, Berka V, Martin F, Ma X, Van Den Akker F, Fabian M, Olson JS (2010) Is Nostoc H-NOX a NO sensor or redox switch? Biochemistry 49:6587–6599
Van Der Star WR, van de Graaf MJ, Kartal B, Picioreanu C, Jetten MS, van Loosdrecht MC (2008) Response of anaerobic ammonium-oxidizing bacteria to hydroxylamine. Appl Environ Microbiol 74:4417–4426
Vlaeminck SE, Hay AG, Maignien L, Verstraete W (2011) In quest of the nitrogen oxidizing prokaryotes of the early earth. Environ Microbiol 13:283–295
Walters CL, Casselden RJ, Taylor AM (1967) Nitrite metabolism by skeletal muscle mitochondria in relation to haem pigments. Biochim Biophys Acta 143:310–318
Weon H-Y, Kim B-Y, Yoo S-H, Baek Y-K, Lee S-Y, Kwon S-W, Go S-J, Stackebrandt E (2006) Pseudomonas pohangensis sp. nov., isolated from seashore sand in Korea. Int J Syst Evol Microbiol 56:2153–2156
Wu ML, Ettwig KF, Jetten MS, Strous M, Keltjens JT, van Niftrik L (2011) A new intra-aerobic metabolism in the nitrite-dependent anaerobic methane-oxidizing bacterium Candidatus ‘Methylomirabilis oxyfera’. Biochem Soc Trans 39:243–248
Xu Y, Labedan B, Glansdorff N (2007) Surprising arginine biosynthesis: a reappraisal of the enzymology and evolution of the pathway in microorganisms. Microbiol Mol Biol Rev 71:36–47
Xue L, Li S, Sheng H, Feng H, Xu S, An L (2007) Nitric oxide alleviates oxidative damage induced by enhanced ultraviolet-B radiation in cyanobacterium. Curr Microbiol 55:294–301
Zobell CE, Upham HC (1944) A list of marine bacteria including descriptions of sixty new species. Bull Univ Calif Scripps Inst Oceanogr 5:53
Zumft WG (1993) The biological role of nitric oxide in bacteria. Arch Microbiol 160:253–264
Zumft W (1997) Cell biology and molecular basis of denitrification. Microbiol Mol Biol Rev 61:533–616
Zumft WG, Frunzke K (1982) Discrimination of ascorbate-dependent nonenzymatic and enzymatic, membrane-bound reduction of nitric oxide in denitrifying Pseudomonas perfectomarinus. Biochim Biophys Acta 681:459–468
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Rőszer, T. (2012). Nitric Oxide is a Bioproduct in Prokaryotes. In: The Biology of Subcellular Nitric Oxide. Springer, Dordrecht. https://doi.org/10.1007/978-94-007-2819-6_2
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