Skip to main content

A Supervised Learning Framework for Automatic Prostate Segmentation in Trans Rectal Ultrasound Images

  • Conference paper
Advanced Concepts for Intelligent Vision Systems (ACIVS 2012)

Abstract

Heterogeneous intensity distribution inside the prostate gland, significant variations in prostate shape, size, inter dataset contrast variations, and imaging artifacts like shadow regions and speckle in Trans Rectal Ultrasound (TRUS) images challenge computer aided automatic or semi-automatic segmentation of the prostate. In this paper, we propose a supervised learning schema based on random forest for automatic initialization and propagation of statistical shape and appearance model. Parametric representation of the statistical model of shape and appearance is derived from principal component analysis (PCA) of the probability distribution inside the prostate and PCA of the contour landmarks obtained from the training images. Unlike traditional statistical models of shape and intensity priors, the appearance model in this paper is derived from the posterior probabilities obtained from random forest classification. This probabilistic information is then used for the initialization and propagation of the statistical model. The proposed method achieves mean Dice Similarity Coefficient (DSC) value of 0.96±0.01, with a mean segmentation time of 0.67±0.02 seconds when validated with 24 images from 6 datasets with considerable shape, size, and intensity variations, in a leave-one-patient-out validation framework. The model achieves statistically significant t-test p-value<0.0001 in mean DSC and mean mean absolute distance (MAD) values compared to traditional statistical models of shape and intensity priors.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 39.99
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 54.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

Preview

Unable to display preview. Download preview PDF.

Unable to display preview. Download preview PDF.

References

  1. Cancer Society Atlanta, A. Prostate Cancer (2011), http://www.cancer.org (accessed on January 28, 2012)

  2. Badiei, S., Salcudean, S.E., Varah, J., Morris, W.J.: Prostate Segmentation in 2D Ultrasound Images Using Image Warping and Ellipse Fitting. In: Larsen, R., Nielsen, M., Sporring, J. (eds.) MICCAI 2006. LNCS, vol. 4191, pp. 17–24. Springer, Heidelberg (2006)

    Chapter  Google Scholar 

  3. Betrouni, N., Vermandel, M., Pasquier, D., Maouche, S., Rousseau, J.: Segmentation of Abdominal Ultrasound Images of the Prostate Using A priori Information and an Adapted Noise Filter. Computerized Medical Imaging and Graphics 29, 43–51 (2005)

    Article  Google Scholar 

  4. Cootes, T.F., Hill, A., Taylor, C.J., Haslam, J.: The Use of Active Shape Model for Locating Structures in Medical Images. Image and Vision Computing 12, 355–366 (1994)

    Article  Google Scholar 

  5. Cootes, T.F., Edwards, G.J., Taylor, C.J.: Active Appearance Models. In: Burkhardt, H., Neumann, B. (eds.) ECCV 1998. LNCS, vol. 1407, pp. 484–498. Springer, Heidelberg (1998)

    Chapter  Google Scholar 

  6. Cosío, F.A.: Automatic Initialization of an Active Shape Model of the Prostate. Medical Image Analysis 12, 469–483 (2008)

    Article  Google Scholar 

  7. Dempster, A.P., Laird, N.M., Rubin, D.B.: Maximum Likelihood from Incomplete Data via the EM Algorithm. Journal of the Royal Statistical Society 39, 1–38 (1977)

    MathSciNet  MATH  Google Scholar 

  8. Diaz, K., Castaneda, B.: Semi-automated Segmentation of the Prostate Gland Boundary in Ultrasound Images Using a Machine Learning Approach. In: Reinhardt, J.M., Pluim, J.P.W. (eds.) Procedings of SPIE Medical Imaging: Image Processing, pp. 1–8, SPIE, USA (2008)

    Google Scholar 

  9. Evangelidis, G.D., Emmanouil, Z.P.: Parametric Image Alignment Using Enhanced Correlation Coefficient Maximization. IEEE Trans. Pattern Anal. Mach. Intell. 30, 1858–1865 (2008)

    Article  Google Scholar 

  10. Geremia, E., Menze, B.H., Clatz, O., Konukoglu, E., Criminisi, A., Ayache, N.: Spatial Decision Forests for MS Lesion Segmentation in Multi-Channel MR Images. In: Jiang, T., Navab, N., Pluim, J.P.W., Viergever, M.A. (eds.) MICCAI 2010. LNCS, vol. 6361, pp. 111–118. Springer, Heidelberg (2010)

    Chapter  Google Scholar 

  11. Ghose, S., Oliver, A., Martí, R., Lladó, X., Freixenet, J., Mitra, J., Vilanova, J.C., Comet, J., Meriaudeau, F.: Statistical shape and texture model of quadrature phase information for prostate segmentation. International Journal of Computer Assisted Radiology and Surgery 7, 43–55 (2012)

    Article  Google Scholar 

  12. Ghose, S., Oliver, A., Martí, R., Lladó, X., Freixenet, J., Vilanova, J.C., Meriaudeau, F.: A probabilistic framework for automatic prostate segmentation with a statistical model of shape and appearance. In: IEEE ICIP, pp. 713–716 (2011)

    Google Scholar 

  13. Gower, J.C.: Generalized Procrustes Analysis. Psychometrika 40, 33–51 (1975)

    Article  MathSciNet  MATH  Google Scholar 

  14. Ladak, H.M., Mao, F., Wang, Y., Downey, D.B., Steinman, D.A., Fenster, A.: Prostate Segmentation from 2D Ultrasound Images. In: Proceedings of the 22nd Annual International Conference of the IEEE Engineering in Medicine and Biology Society, pp. 3188–3191. IEEE Computer Society Press, Chcago (2000)

    Google Scholar 

  15. Li, W., Liao, S., Feng, Q., Chen, W., Shen, D.: Learning Image Context for Segmentation of Prostate in CT-Guided Radiotherapy. In: Fichtinger, G., Martel, A., Peters, T. (eds.) MICCAI 2011, Part III. LNCS, vol. 6893, pp. 570–578. Springer, Heidelberg (2011)

    Chapter  Google Scholar 

  16. Liu, H., Cheng, G., Rubens, D., Strang, J.G., Liao, L., Brasacchio, R., Messing, E., Yu’, Y.: Automatic Segmentation of Prostate Boundaries in Transrectal Ultrasound (TRUS) Imaging. In: Sonka, M., Fitzpatrick, J.M. (eds.) Proceedings of the SPIE Medical Imaging: Image Processings, pp. 412–423, SPIE, USA (2002)

    Google Scholar 

  17. MICCAI: 2009 prostate segmentation challenge MICCAI (2009), http://wiki.na-mic.org/Wiki/index.php (accessed on April 1, 2011)

  18. Shen, D., Zhan, Y., Davatzikos, C.: Segmentation of Prostate Boundaries from Ultrasound Images Using Statistical Shape Model. IEEE Transactions on Medical Imaging 22, 539–551 (2003)

    Article  Google Scholar 

  19. Yan, P., Xu, S., Turkbey, B., Kruecker, J.: Discrete Deformable Model Guided by Partial Active Shape Model for TRUS Image Segmentation. IEEE Transactions on Biomedical Engineering 57, 1158–1166 (2010)

    Article  Google Scholar 

  20. Zhan, Y., Shen, D.: Deformable Segmentation of 3D Ultrasound Prostate Images Using Statistical Texture Matching Method. IEEE Transactions on Medical Imaging 25, 256–272 (2006)

    Article  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2012 Springer-Verlag Berlin Heidelberg

About this paper

Cite this paper

Ghose, S. et al. (2012). A Supervised Learning Framework for Automatic Prostate Segmentation in Trans Rectal Ultrasound Images. In: Blanc-Talon, J., Philips, W., Popescu, D., Scheunders, P., Zemčík, P. (eds) Advanced Concepts for Intelligent Vision Systems. ACIVS 2012. Lecture Notes in Computer Science, vol 7517. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-642-33140-4_17

Download citation

  • DOI: https://doi.org/10.1007/978-3-642-33140-4_17

  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-642-33139-8

  • Online ISBN: 978-3-642-33140-4

  • eBook Packages: Computer ScienceComputer Science (R0)

Publish with us

Policies and ethics