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From Gene Regulation to Stochastic Fusion

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Part of the book series: Lecture Notes in Computer Science ((LNTCS,volume 5204))

Abstract

Usual process algebras are working with one-to-one interactions, and so it is difficult to use them in order to describe complex biological systems like gene regulation where many-to-many interactions are involved. We overcome this limitation and present a stochastic fusion calculus suitable to describe the dynamic behaviour involving many-to-many interactions. We extend the semantics of the fusion calculus from labelled transition system to stochastic labelled transition system where the evolution of a system is driven by probability distributions, then we analyse the stochastic distribution of the synchronization between interacting processes. Finally we define and study a stochastic hyperequivalence, and present an axiomatic system for it.

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Cristian S. Calude José Félix Costa Rudolf Freund Marion Oswald Grzegorz Rozenberg

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© 2008 Springer-Verlag Berlin Heidelberg

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Ciobanu, G. (2008). From Gene Regulation to Stochastic Fusion. In: Calude, C.S., Costa, J.F., Freund, R., Oswald, M., Rozenberg, G. (eds) Unconventional Computing. UC 2008. Lecture Notes in Computer Science, vol 5204. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-540-85194-3_7

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  • DOI: https://doi.org/10.1007/978-3-540-85194-3_7

  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-540-85193-6

  • Online ISBN: 978-3-540-85194-3

  • eBook Packages: Computer ScienceComputer Science (R0)

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