Skip to main content

Mycobacterium avium subspecies paratuberculosis

  • Chapter
  • 802 Accesses

Mycobacterium avium subsp. paratuberculosis (Map) is the causative agent of Johne’s disease in cattle and other domesticated and wild ruminant species. The organism and disease were first described over a century ago, and despite the considerable morbidity and mortality associated with Map infection in animal agriculture, relatively little is known about the molecular mechanisms of virulence and pathogenesis of infection or the population structure and molecular epidemiology of the bacterium. The description of the complete genome sequence of the K-10 strain of Map in 2005 has catalyzed and enabled research in these areas, particularly as relates to methods for strain differentiation and diagnostic test development. In the current chapter, we provide a post-genomics perspective on our current understanding of the bacterium and the disease it causes, and highlight our current understanding of the population structure of Map. Overall, the availability of the genome sequence of Map has provided a strong foundation for the rational development of the next generation of tools and techniques for the prevention and control of this devastating animal pathogen.

This is a preview of subscription content, log in via an institution.

Buying options

Chapter
USD   29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD   169.00
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD   219.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD   219.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Learn about institutional subscriptions

Preview

Unable to display preview. Download preview PDF.

Unable to display preview. Download preview PDF.

References

  • Adair DM, Worsham PL, Hill KK, Klevytska AM, Jackson PJ, Friedlander AM, Keim P (2000) Diversity in a variable-number tandem repeat from Yersinia pestis. J Clin Micro-biol 38:1516–1519

    CAS  Google Scholar 

  • Aho AD, McNulty AM, Coussens PM (2003) Enhanced expression of interleukin-1alpha and tumor necrosis factor receptor-associated protein 1 in ileal tissues of cattle infected with Mycobacterium avium subsp. paratuberculo-sis. Infect Immun 71:6479–6486

    Article  PubMed  CAS  Google Scholar 

  • Amonsin A, Li L, Zhang Q, Bannantine JP, Motiwala AS, Sreevatsan S, Kapur V (2004) Multilocus short sequence repeat sequencing approach for differentiating among Mycobacterium avium subsp. paratuberculosis strains. J Clin Microbiol 42:1694–1702

    Article  PubMed  CAS  Google Scholar 

  • Arruda S, Bomfim G, Knights R, Huima-Byron T, Riley LW (1993) Cloning of an M. tuberculosis DNA fragment associated with entry and survival inside cells. Science 261:1454–1457

    Article  PubMed  CAS  Google Scholar 

  • Ashmarina LI, Rusnak N, Miziorko HM, Mitchell GA (1994) 3-Hydroxy-3-methylglutaryl-CoA lyase is present in mouse and human liver peroxisomes. J Biol Chem 269:31929– 31932

    PubMed  CAS  Google Scholar 

  • Baess I (1983) Deoxyribonucleic acid relationships between different serovars of Mycobacterium avium, Mycobacte-rium intracellulare and Mycobacterium scrofulaceum. Acta Pathol Microbiol Immunol Scand B 91:201–203

    PubMed  CAS  Google Scholar 

  • Bensch S, Akesson M (2005) Ten years of AFLP in ecology and evolution: why so few animals? Mol Ecol 14:2899–2914

    Article  PubMed  CAS  Google Scholar 

  • Benson G (1999) Tandem repeats finder: a program to analyze DNA sequences. Nucl Acids Res 27:573–580

    Article  PubMed  CAS  Google Scholar 

  • Besra GS, Sievert T, Lee RE, Slayden RA, Brennan PJ, Takayama K (1994) Identification of the apparent carrier in mycolic acid synthesis. Proc Natl Acad Sci USA 91:12735–12739

    Article  PubMed  CAS  Google Scholar 

  • Betts JC, Betts JC, Lukey PT, Robb LC, McAdam RA, Duncan K (2002) Evaluation of a nutrient starvation model of Myco-bacterium tuberculosis persistence by gene and protein expression profiling. Mol Microbiol 43:717–731

    Article  PubMed  CAS  Google Scholar 

  • Bloch H, Segal W (1956) Biochemical differentiation of Myco-bacterium tuberculosis grown in vivo and in vitro. J Bacte-riol 72:132–141

    CAS  Google Scholar 

  • Bull TJ, Hermon-Taylor J, Pavlik I, El-Zaatari F, Tizard M (2000) Characterization of IS900 loci in Mycobacterium avium subsp. paratuberculosis and development of multiplex PCR typing. Microbiology 146:2185–2197

    PubMed  CAS  Google Scholar 

  • Bull TJ, McMinn EJ, Sidi-Boumedine K, Skull A, Durkin D, Neild P, Rhodes G, Pickup R, Hermon-Taylor J (2003a) Detection and verification of Mycobacterium avium subsp. paratu-berculosis in fresh ileocolonic mucosal biopsy specimens from individuals with and without Crohn's disease. J Clin Microbiol 41:2915–2923

    Article  CAS  Google Scholar 

  • Bull TJ, Sidi-Boumedine K, McMinn EJ, Stevenson K, Pickup R, Hermon-Taylor J (2003b) Mycobacterial interspersed repetitive units (MIRU) differentiate Mycobacterium avium subspecies paratuberculosis from other species of the Mycobacterium avium complex. Mol Cell Probes 17:157–164

    Article  CAS  Google Scholar 

  • Burne RA, Chen YY (2000) Bacterial ureases in infectious diseases. Microb Infect 2:533–542

    Article  CAS  Google Scholar 

  • Camus JC, Pryor MJ, Medigue C, Cole ST (2002) Re-annotation of the genome sequence of Mycobacterium tuberculosis H37Rv. Microbiology 148:2967–2973

    PubMed  CAS  Google Scholar 

  • Chacon O, Bermudez LE, Barletta RG (2004) Johne's disease, inflammatory bowel disease, and Mycobacterium paratu-berculosis. Annu Rev Microbiol 58:329–363

    Article  PubMed  CAS  Google Scholar 

  • Chiodini RJ, Van Kruiningen HJ (1983) Eastern white-tailed deer as a reservoir of ruminant paratuberculosis. J Am Vet Med Assoc 182:168–169

    PubMed  CAS  Google Scholar 

  • Chiodini RJ, Van Kruiningen HJ, Merkal RS (1984) Possible role of mycobacteria in inflammatory bowel disease. I. An unclassified Mycobacterium species isolated from patients with Crohn's disease. Dig Dis Sci 29:1073–1079

    Article  PubMed  CAS  Google Scholar 

  • Choy E, Whittington RJ, Marsh I, Marshall J, Campbell MT (1998) A method for purification and characterisation of Mycobacterium avium subsp. paratuberculosis from the intestinal mucosa of sheep with Johne's disease. Vet Micro-biol 64:51–60

    Article  CAS  Google Scholar 

  • Clarke CJ (1997) The pathology and pathogenesis of paratu-berculosis in ruminants and other species. J Comp Pathol 116:217–61

    Article  PubMed  CAS  Google Scholar 

  • Cocito C, Gilot P, Coene M, de Kesel M, Poupart P, Vannuffel P (1994) Paratuberculosis. Clin Microbiol Rev 7:328–345

    PubMed  CAS  Google Scholar 

  • Coffin JW, Condon C, Compston CA, Potter KN, Lamontagne LR, Shafiq J, Kunimoto DY (1992) Use of restriction fragment length polymorphisms resolved by pulsed-field gel electrophoresis for subspecies identification of mycobac-teria in the Mycobacterium avium complex and for isolation of DNA probes. J Clin Microbiol 30:1829–1836

    PubMed  CAS  Google Scholar 

  • Cole ST, Brosch R, Parkhill J, Garnier T, Churcher C, Harris D (1998) Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence. Nature 393:537–544

    Article  PubMed  CAS  Google Scholar 

  • Cole ST, Eiglmeier K, Parkhill J, James KD, Thomson NR, Wheeler PR, Honore N (2001) Massive gene decay in the leprosy bacillus. Nature 409:1007–1011

    Article  PubMed  CAS  Google Scholar 

  • Collins DM, Gabric DM, de Lisle GW (1990) Identification of two groups of Mycobacterium paratuberculosis strains by restriction endonuclease analysis and DNA hybridization. J Clin Microbiol 28:1591–1606

    PubMed  CAS  Google Scholar 

  • Coussens PM (2001) Mycobacterium paratuberculosis and the bovine immune system. Anim Health Res Rev 2:141–161

    PubMed  CAS  Google Scholar 

  • de Juan L, Mateos A, Dominguez L, Sharp JM, Stevenson K (2005) Genetic diversity of Mycobacterium avium subspecies paratuberculosis isolates from goats detected by pulsed-field gel electrophoresis. Vet Microbiol 106:249–257

    Article  PubMed  CAS  Google Scholar 

  • Feizabadi MM, Robertson ID, Cousins DV, Dawson DJ, Hamp-son DJ (1997) Use of multilocus enzyme electrophoresis to examine genetic relationships amongst isolates of Myco-bacterium intracellulare and related species. Microbiology 143(Pt 4):1461–1469

    PubMed  CAS  Google Scholar 

  • Foley-Thomas EM, Whipple DL, Bermudez LE, Barletta RG (1995) Phage infection, transfection and transformation of Mycobacterium avium complex and Mycobacterium paratuberculosis. Microbiology 141:1173–1181

    Article  PubMed  CAS  Google Scholar 

  • Francois B, Krishnamoorthy R, Elion J (1997) Comparative study of Mycobacterium paratuberculosis strains isolated from Crohn's disease and Johne's disease using restriction fragment length polymorphism and arbitrarily primed polymerase chain reaction. Epidemiol Infect 118:227–233

    Article  PubMed  CAS  Google Scholar 

  • Garnier T, Garnier T, Eiglmeier K, Camus JC, Medina N, Mansoor H, Pryor M (2003) The complete genome sequence of Myco-bacterium bovis. Proc Natl Acad Sci USA 100:7877–7882

    Article  PubMed  CAS  Google Scholar 

  • Ghadiali AH, Strother M, Naser SA, Manning EJ, Sreevatsan S (2004) Mycobacterium avium subsp. paratuberculosis strains isolated from Crohn's disease patients and animal species exhibit similar polymorphic locus patterns. J Clin Microbiol 42:5345–5348

    Article  PubMed  Google Scholar 

  • Gitnick G, Collins J, Beaman B, Brooks D, Arthur M, Imaeda T, Palieschesky M (1989) Preliminary report on isolation of mycobacteria from patients with Crohn's disease. Dig Dis Sci 34:925–932

    Article  PubMed  CAS  Google Scholar 

  • GordonS V, Heym B, Parkhill J, Barrell B, Cole ST (1999) New insertion sequences and a novel repeated sequence in the genome of Mycobacterium tuberculosis H37Rv. Microbiology 145:881–892

    Google Scholar 

  • Grant IR, Ball HJ, Rowe MT (2002) Incidence of Mycobacte-rium paratuberculosis in bulk raw and commercially pasteurized cows' milk from approved dairy processing establishments in the United Kingdom. Appl Environ Microbiol 68:2428–2435

    Article  PubMed  CAS  Google Scholar 

  • Green EP, Tizard ML, Moss MT, Thompson J, Winterbourne DJ, McFadden JJ, Hermon- Taylor J (1989) Sequence and characteristics of IS900, an insertion element identified in a human Crohn's disease isolate of Mycobacterium paratu-berculosis. Nucl Acids Res 17:9063–9073

    Article  PubMed  CAS  Google Scholar 

  • Greenstein RJ (2003) Is Crohn's disease caused by a mycobacte-rium? Comparisons with leprosy, tuberculosis, and Johne's disease. Lancet Infect Dis 3:507–514

    Article  PubMed  Google Scholar 

  • Hamilton HL, Follett DM, Siegfried LM, Czuprynski CJ (1989) Intestinal multiplication of Mycobacterium paratuber-culosis in athymic nude gnotobiotic mice. Infect Immun 57:225–230

    PubMed  CAS  Google Scholar 

  • Harris NB, Barletta RG (2001) Mycobacterium avium subsp. paratuberculosis in Veterinary Medicine. Clin Microbiol Rev 14:489–512

    Article  PubMed  CAS  Google Scholar 

  • Harris NB, Payeur JB, Kapur V, Sreevatsan S (2006) Short-sequence-repeat analysis of Mycobacterium avium subsp. paratuberculosis and Mycobacterium avium subsp. avium isolates collected from animals throughout the United States reveals both stability of loci and extensive diversity. J Clin Microbiol 44:2970–2973

    Article  PubMed  CAS  Google Scholar 

  • Jessup DA, Abbas B, Behymer D (1981) Paratuberculosis in tule elk in California. J Am Vet Med Assoc 179:1252–1254

    PubMed  CAS  Google Scholar 

  • Kim W, Hong YP, Yoo JH, Lee WB, Choi CS, Chung SI (2002) Genetic relationships of Bacillus anthracis and closely related species based on variable-number tandem repeat analysis and BOX-PCR genomic fingerprinting. FEMS Microbiol Lett 207:21–27

    Article  PubMed  CAS  Google Scholar 

  • Koonin EV, Galperin MY (2003) Evolution of Central Metabolic Pathways: The Playground of Non-orthologus Gene Displacement. Kluwer, Dordrecht, The Netherlands

    Google Scholar 

  • Kreeger JM (1991) Ruminant paratuberculosis—a century of progress and frustration. J Vet Diagn Invest 3:373–382

    PubMed  CAS  Google Scholar 

  • Lambrecht RS, Collins MT (1992) Mycobacterium paratuber-culosis. Factors that influence mycobactin dependence. Diagn Microbiol Infect Dis 15:239–246

    Article  PubMed  CAS  Google Scholar 

  • Lambrecht RS, Carriere JF, Collins MT (1988) A model for analyzing growth kinetics of a slowly growing Mycobacterium sp. Appl Environ Microbiol 54:910–916

    PubMed  CAS  Google Scholar 

  • Levy-FrebaultV V, Thorel MF, Varnerot A, Gicquel B (1989) DNA polymorphism in Mycobacterium paratuberculosis, “wood pigeon mycobacteria,” and related mycobacte-ria analyzed by field inversion gel electrophoresis. J Clin Microbiol 27:2823–2826

    Google Scholar 

  • Li L, Bannantine JP, Zhang Q, Amonsin A, May BJ, Alt D, Ban-erji N, Kanjilal S, Kapur V (2005) The complete genome sequence of Mycobacterium avium subspecies paratuber-culosis. Proc Natl Acad Sci USA 102:12344–12349

    Article  PubMed  CAS  Google Scholar 

  • Libke KG, Walton AM (1975) Presumptive paratuberculosis in a Virginia white-tailed deer. J Wildl Dis 11:552–553

    PubMed  CAS  Google Scholar 

  • Lindstedt BA, Heir E, Gjernes E, Kapperud G (2003) DNA fingerprinting of Salmonella enterica subsp. enterica serovar typhimurium with emphasis on phage type DT104 based on variable number of tandem repeat loci. J Clin Microbiol 41:1469–1479

    Article  PubMed  CAS  Google Scholar 

  • Maiden MC, Bygraves JA, Feil E, Morelli G, Russell JE, Urwin R, Zhang Q, Zhou J, Zurth K, Caugant DA, Feavers IM, Acht-man M, Spratt BG (1998) Multilocus sequence typing: a portable approach to the identification of clones within populations of pathogenic microorganisms. Proc Natl Acad Sci USA 95:3140–3145

    Article  PubMed  CAS  Google Scholar 

  • Marri PR, Bannantine JP, Golding GB (2006) Comparative genomics of metabolic pathways in Mycobacterium species: gene duplication, gene decay and lateral gene transfer. FEMS Microbiol Rev 30:906–925

    Article  PubMed  CAS  Google Scholar 

  • Mijs W, de Haas P, Rossau R, Van der Laan T, Rigouts L, Portaels F, van Soolingen D (2002) Molecular evidence to support a proposal to reserve the designation Mycobacterium avium subsp. avium for bird-type isolates and ‘M. avium subsp. hominissuis’ for the human/porcine type of M. avium. Int J Syst Evol Microbiol 52:1505–1518

    Article  PubMed  CAS  Google Scholar 

  • Minnikin DE, Goodfellow M (1980) Lipid composition in the classification and identification of acid-fast bacteria. Soc Appl Bacteriol Symp Ser 8:189–256

    PubMed  CAS  Google Scholar 

  • Motiwala AS, Strother M, et al (2003) Molecular epidemiology of Mycobacterium avium subsp. paratuberculosis: evidence for limited strain diversity, strain sharing, and identification of unique targets for diagnosis. J Clin Microbiol 41:2015–2026

    Article  PubMed  CAS  Google Scholar 

  • Motiwala AS, Amonsin A, Strother M, Manning EJ, Kapur V, Sreevatsan S (2004) Molecular epidemiology of Mycobac-terium avium subsp. paratuberculosis isolates recovered from wild animal species. J Clin Microbiol 42:1703–12

    Article  PubMed  CAS  Google Scholar 

  • Motiwala AS, Strother M, Amonsin A, Byrum B, Naser SA, Sta-bel JR, Shulaw WP, Bannantine J P, Kapur V, Sreevatsan S (2005) Rapid detection and typing of strains of Mycobac-terium avium subsp. paratuberculosis from broth cultures. J Clin Microbiol 43:2111–2117

    Article  PubMed  CAS  Google Scholar 

  • Motiwala AS, Li L, Kapur V, Sreevatsan S (2006) Current understanding of the genetic diversity of Mycobacterium avium subsp. paratuberculosis. Microb Infect 8:1406–1418

    Article  CAS  Google Scholar 

  • MovahedzadehF, Smith DA, Norman RA, Dinadayala P, Murray-Rust J, Russell DG, Kendall SL, Rison SC, McAl-ister MS, Bancroft GJ, McDonald NQ, Daffe M, Av-Gay Y, Stoker NG (2004) The Mycobacterium tuberculosis ino1 gene is essential for growth and virulence. Mol Microbiol 51:1003–1014

    Article  PubMed  CAS  Google Scholar 

  • Naser SA, Schwartz D, Shafran I (2000) Isolation of Mycobac-terium avium subsp paratuberculosis from breast milk of Crohn's disease patients. Am J Gastroenterol 95:1094–1095

    Article  PubMed  CAS  Google Scholar 

  • O'Shea B, Khare S, Bliss K, Klein P, Ficht TA, Adams LG, Rice-Ficht AC (2004) Amplified fragment length polymorphism reveals genomic variability among Mycobacterium avium subsp. paratuberculosis isolates. J Clin Microbiol 42:3600–3606

    Article  PubMed  CAS  Google Scholar 

  • Ott SL, Wells SJ, Wagner BA (1999) Herd-level economic losses associated with Johne's disease on US dairy operations. Prev Vet Med 40:179–192

    Article  PubMed  CAS  Google Scholar 

  • Overduin P, Schouls L, Roholl P, van der Zanden A, Mahmmod N, Herrewegh A, van Soolingen D (2004) Use of multilocus variable-number tandem-repeat analysis for typing Myco-bacterium avium subsp. paratuberculosis. J Clin Microbiol 42:5022–5028

    Article  PubMed  CAS  Google Scholar 

  • Paustian ML, Amonsin A, Kapur V, Bannantine JP (2004) Characterization of novel coding sequences specific to Mycobacterium avium subsp. paratuberculosis: implications for diagnosis of Johne's Disease. J Clin Microbiol 42:2675–2681

    Article  PubMed  CAS  Google Scholar 

  • Pavlik I, Bejckova L, Pavlas M, Rozsypalova Z, Koskova S (1995) Characterization by restriction endonuclease analysis and DNA hybridization using IS900 of bovine, ovine, caprine and human dependent strains of Mycobacterium paratu-berculosis isolated in various localities. Vet Microbiol 45:311–318

    Article  PubMed  CAS  Google Scholar 

  • Pavlik I, Horvathova A, Dvorska L, Bartl J, Svastova P, du Maine R, Rychlik I (1999) Standardisation of restriction fragment length polymorphism analysis for Mycobacterium avium subspecies paratuberculosis. J Microbiol Meth 38:155–167

    Article  CAS  Google Scholar 

  • Perret X, Viprey V, Freiberg C, Broughton WJ (1997) Structure and evolution of NGRRS-1, a complex, repeated element in the genome of Rhizobium sp. strain NGR234. J Bacteriol 179:7488–7496

    PubMed  CAS  Google Scholar 

  • Quadri LE, Sello J, Keating TA, Weinreb PH, Walsh CT (1998) Identification of a Mycobacterium tuberculosis gene cluster encoding the biosynthetic enzymes for assembly of the virulence-conferring siderophore mycobactin. Chem Biol 5:631–645

    Article  PubMed  CAS  Google Scholar 

  • Rhoades ER, Ullrich HJ (2000) How to establish a lasting relationship with your host: lessons learned from Mycobacte-rium spp. Immunol Cell Biol 78:301–310

    Article  PubMed  CAS  Google Scholar 

  • Rocha EP, Danchin A, Viari A (1999) Functional and evolutionary roles of long repeats in prokaryotes. Res Microbiol 150:725–733

    Article  PubMed  CAS  Google Scholar 

  • Romano MI, Amadio A, Bigi F, Klepp L, Etchechoury I, Llana MN, Morsella C, Paolicchi F, Pavlik I, Bartos M, Leao SC, Cataldi A (2005) Further analysis of VNTR and MIRU in the genome of Mycobacterium avium complex, and application to molecular epidemiology of isolates from South America. Vet Microbiol 110:221–237

    Article  PubMed  CAS  Google Scholar 

  • Rozen S, Skaletsky H (2000) Primer3 on the WWW for general users and for biologist programmers. Meth Mol Biol 132:365–386

    CAS  Google Scholar 

  • Saito H, Tomioka H, Sato K, Tasaka H, Tsukamura M, Kuze F, Asano K (1989) Identification and partial characterization of Mycobacterium avium and Mycobacterium intracellu-lare by using DNA probes. J Clin Microbiol 27:994–997

    PubMed  CAS  Google Scholar 

  • Schnappinger D, Ehrt S, Voskuil MI, Liu Y, Mangan JA, Monahan IM, Dolganov G, Efron B, Butcher PD, Nathan C, Schoolnik GK (2003) Transcriptional Adaptation of Mycobacterium tuberculosis within macrophages: insights into the phago-somal environment. J Exp Med 198:693–704

    Article  PubMed  CAS  Google Scholar 

  • Schorey JS, Carroll MC, Brown EJ (1997) A macrophage invasion mechanism of pathogenic mycobacteria. Science 277:1091–1093

    Article  PubMed  CAS  Google Scholar 

  • Secott TE, Lin TL, Wu CC (2004) Mycobacterium avium subsp. paratuberculosis fibronectin attachment protein facilitates M-cell targeting and invasion through a fibronectin bridge with host integrins. Infect Immun 72:3724–3732

    Article  PubMed  CAS  Google Scholar 

  • Segal W, Bloch H (1957) Pathogenic and immunogenic differentiation of Mycobacterium tuberculosis grown in vitro and in vivo. Am Rev Tuberc 75:495–500

    PubMed  CAS  Google Scholar 

  • Sevilla I, Garrido JM, Geijo M, Juste RA (2007) Pulsed-field gel electrophoresis profile homogeneity of Mycobacterium avium subsp. paratuberculosis isolates from cattle and heterogeneity of those from sheep and goats. BMC Microbiol 7:18

    Article  PubMed  CAS  Google Scholar 

  • Sigurdardottir OG, Bakke-McKellep AM, Djonne B, Evensen O (2005) Mycobacterium avium subsp. paratuberculosis enters the small intestinal mucosa of goat kids in areas with and without Peyer's patches as demonstrated with the everted sleeve method. Comp Immunol Microbiol Infect Dis 28:223–230

    Article  PubMed  Google Scholar 

  • Sigurethardottir OG, Valheim M, Press CM (2004) Establishment of Mycobacterium avium subsp. paratuberculosis infection in the intestine of ruminants. Adv Drug Deliv Rev 56:819–834

    Article  PubMed  CAS  Google Scholar 

  • Smith I (2003) Mycobacterium tuberculosis pathogenesis and molecular determinants of virulence. Clin Microbiol Rev 16:463–496

    Article  PubMed  CAS  Google Scholar 

  • Stabel JR (1998) Johne's disease: a hidden threat. J Dairy Sci 81:283–288

    PubMed  CAS  Google Scholar 

  • Stabel JR (2000) Transitions in immune responses to Mycobac-terium paratuberculosis. Vet Microbiol 77:465–473

    Article  PubMed  CAS  Google Scholar 

  • Stephan R, Schumacher S, Tasara T, Grant IR (2007) Prevalence of Mycobacterium avium subspecies paratuberculosis in Swiss raw milk cheeses collected at the retail level. J Dairy Sci 90:3590–3595

    Article  PubMed  CAS  Google Scholar 

  • Stevenson K, Hughes VM, de Juan L, Inglis NF, Wright F, Sharp JM (2002) Molecular characterization of pigmented and nonpigmented isolates of Mycobacterium avium subsp. paratuberculosis. J Clin Microbiol 40:1798–1804

    Article  PubMed  CAS  Google Scholar 

  • Stewart DJ, Vaughan JA, Stiles PL, Noske PJ, Tizard ML, Prowse SJ, Michalski WP, Butler KL, Jones SL (2004) A long-term study in Merino sheep experimentally infected with Myco-bacterium avium subsp. paratuberculosis: clinical disease, faecal culture and immunological studies. Vet Microbiol 104:165–178

    Article  PubMed  CAS  Google Scholar 

  • Streeter RN, Hoffsis GF, Bech-Nielsen S, Shulaw WP, Rings DM (1995) Isolation of Mycobacterium paratuberculosis from colostrum and milk of subclinically infected cows. Am J Vet Res 56:1322–1324

    PubMed  CAS  Google Scholar 

  • Strommenger B, Stevenson K, Gerlach GF (2001) Isolation and diagnostic potential of ISMav2, a novel insertion sequence-likeelement from Mycobacterium avium subspecies paratuberculosis. FEMS Microbiol Lett 196:31–37

    Article  PubMed  CAS  Google Scholar 

  • Supply P, Mazars E, Lesjean S, Vincent V, Gicquel B, Locht C (2000) Variable human minisatellite-like regions in the Mycobacterium tuberculosis genome. Mol Microbiol 36:762–771

    Article  PubMed  CAS  Google Scholar 

  • Supply P, Lesjean S, Savine E, Kremer K, van Soolingen D, Locht C (2001) Automated high-throughput genotyping for study of global epidemiology of Mycobacterium tuberculosis based on mycobacterial interspersed repetitive units. J Clin Microbiol 39:3563–3571

    Article  PubMed  CAS  Google Scholar 

  • Sweeney RW (1996) Transmission of paratuberculosis. Vet Clin North Am Food Anim Pract 12:305–312

    PubMed  CAS  Google Scholar 

  • Tekaia F, Gordon SV, Garnier T, Brosch R, Barrell BG, Cole ST (1999) Analysis of the proteome of Mycobacterium tuberculosis in silico. Tuber Lung Dis 79:329–342

    Article  PubMed  CAS  Google Scholar 

  • Thibault VC, Grayon M, Boschiroli ML, Hubbans C, Overduin P, Stevenson K, Gutierrez MC, Supply P, Biet F (2007) New variable-number tandem-repeat markers for typing Mycobacte-rium avium subsp. paratuberculosis and M. avium strains: comparison with IS900 and IS1245 restriction fragment length polymorphism typing. J Clin Microbiol 45:2404–2410

    Article  PubMed  CAS  Google Scholar 

  • Thorel MF, Krichevsky M, Levy-Frebault VV (1990) Numerical taxonomy of mycobactin-dependent mycobacteria, emended description of Mycobacterium avium, and description of Mycobacterium avium subsp. avium subsp. nov., Mycobacterium avium subsp. paratuberculosis subsp. nov., and Mycobacterium avium subsp. silvaticum subsp. nov. Int J Syst Bacteriol 40:254–260

    Article  PubMed  CAS  Google Scholar 

  • Torres-Cruz J, van der Woude MW (2003) Slipped-strand mis-pairing can function as a phase variation mechanism in Escherichia coli. J Bacteriol 185:6990–6994

    Article  PubMed  CAS  Google Scholar 

  • USDepartment of Agriculture, A PHIS (1977) Johne's Disease on U.S. Dairy Operation, Fort Collins, Colorado, USA

    Google Scholar 

  • Valentin-Weigand P, Goethe R (1999) Pathogenesis of Myco-bacterium avium subspecies paratuberculosis infections in ruminants: still more questions than answers. Microbes Infect 1:1121–1127

    Article  PubMed  CAS  Google Scholar 

  • van Belkum A, Scherer S, van Alphen L, Verbrugh H (1998) Short-sequence DNA repeats in prokaryotic genomes. Microbiol Mol Biol Rev 62:275–293

    PubMed  Google Scholar 

  • Vos P, Hogers R, Bleeker M, Reijans M, van de Lee T, Hornes M, Frijters A (1995) AFLP: a new technique for DNA fingerprinting. Nucl Acids Res 23:4407–4414

    Article  PubMed  CAS  Google Scholar 

  • Wasem CF, McCarthy CM, Murray LW (1991) Multilocus enzyme electrophoresis analysis of the Mycobacterium avium complex and other mycobacteria. J Clin Microbiol 29:264–271

    PubMed  CAS  Google Scholar 

  • Whitlock RH, Buergelt C (1996) Preclinical and clinical manifestations of paratuberculosis (including pathology). Vet Clin North Am Food Anim Pract 12:345–356

    PubMed  CAS  Google Scholar 

  • Whittington R, Marsh I, Choy E, Cousins D (1998) Polymorphisms in IS1311, an insertion sequence common to Myco-bacterium avium and M. avium subsp. paratuberculosis, can be used to distinguish between and within these species. Mol Cell Probes 12:349–358

    Article  PubMed  CAS  Google Scholar 

  • Whittington RJ, Hope AF, Marshall DJ, Taragel CA, Marsh I (2000) Molecular epidemiology of Mycobacterium avium subsp. paratuberculosis: IS900 restriction fragment length polymorphism and IS1311 polymorphism analyses of isolates from animals and a human in Australia. J Clin Micro-biol 38:3240–3248

    CAS  Google Scholar 

  • Whittington RJ, Marsh IB, Whitlock RH (2001) Typing of IS 1311 polymorphisms confirms that bison (Bison bison) with paratuberculosis in Montana are infected with a strain of Mycobacterium avium subsp. paratuberculosis distinct from that occurring in cattle and other domesticated livestock. Mol Cell Probes 15:139–145

    Article  PubMed  CAS  Google Scholar 

  • Whittington RJ, Marshall DJ, Nicholls PJ, Marshall IB, Redda-cliff LA (2004) Survival and dormancy of Mycobacterium avium subsp. paratuberculosis in the environment. Appl Environ Microbiol 70:2989–3004

    Article  PubMed  CAS  Google Scholar 

  • Yakrus MA, Reeves MW, Hunter SB (1992) Characterization of isolates of Mycobacterium avium serotypes 4 and 8 from patients with AIDS by multilocus enzyme electrophoresis. J Clin Microbiol 30:1474–1478

    PubMed  CAS  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2009 Springer-Verlag Berlin Heidelberg

About this chapter

Cite this chapter

Li, LL., Singh, S., Bannantine, J., Kanjilal, S., Kapur, V. (2009). Mycobacterium avium subspecies paratuberculosis. In: Nene, V., Kole, C. (eds) Genome Mapping and Genomics in Animal-Associated Microbes. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-540-74042-1_2

Download citation

Publish with us

Policies and ethics