Skip to main content

Effects of fragmentation of evergreen broad-leaved forests on genetic diversity of Ardisia crenata var. bicolor (Myrsinaceae)

  • Chapter
  • 1451 Accesses

Part of the book series: Topics in Biodiversity and Conservation ((TOBC,volume 2))

Abstract

Due to the long generation times and high densities, dominant tree species usually did not respond consistently with theoretical predictions to the recent fragmentation. Genetic structures of shrubs and herbs, especially those with low densities, may be more sensitive to forest fragmentation. We studied the genetic structure of a self-compatible subshrub, Ardisia crenata var. bicolor (Myrsinaceae) in a recently fragmented landscape. Ten RAPD primers used for analysis generated a total of 76 bands. We found that A. c. var. bicolor had relatively low species-level (P 95 = 63.2%; H = 0.106; Shannon diversity index (SI) = 0.246) and within-population diversity (P 95 = 5.3−46.1%; H = 0.026−0.175; SI = 0.032−0.253), and significant population differentiation (G ST = 0.445). Significantly positive relationships were found between measures of diversity (P 95, H and SI) and the log of estimated population size. No significant relationship was observed between Nei’s genetic distance and spatial distance of pairwise populations, indicating no isolation-by-distance. Given most species of forests are shrubs and herbs with short generation times, our observation indicated that distinct genetic consequences of recent fragmentation may be expected for quite a number of plant species.

This is a preview of subscription content, log in via an institution.

Buying options

Chapter
USD   29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD   259.00
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD   329.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD   329.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Learn about institutional subscriptions

Preview

Unable to display preview. Download preview PDF.

Unable to display preview. Download preview PDF.

References

  • Bacles C.F.E., Lowe A.J. and Ennos R.A. 2004. Genetic effects of chronic habitat fragmentation on tree species: the case of Sorbus aucuparia in a deforested Scottish landscape. Molecular Ecology 13: 573–584.

    Article  PubMed  CAS  Google Scholar 

  • Buchert G.P., Rajora O.P., Hood J.V. and Dancik B.P. 1997. Effects of harvesting on genetic diversity in old-growth eastern white pine in Ontario, Canada. Conservation Biology 11: 747–758.

    Article  Google Scholar 

  • Cardoso M.A., Provan J., Powell W., Ferreira P.C.G. and de Oliveira D.E. 1998. High genetic differentiation among remnant populations of the endangered Caesalpinia echinata Lam. (Leguminosae-Caesalpinioideae). Molecular Ecology 7: 601–608.

    Article  Google Scholar 

  • Cassel A. and Tammaru T. 2003. Allozyme variability in central, peripheral and isolated populations of the scarce heath (Coenonympha hero: Lepidoptera, Nymphalidae); implications for conservation. Conservation Genetics 4: 83–93.

    Article  CAS  Google Scholar 

  • Chen X.Y. 2000. Effects of habitat fragmentation on genetic structure of plant populations and implications for the biodiversity conservation. Acta Ecologica Sinica 20: 884–892.

    Google Scholar 

  • Chen X.Y., Li N. and Shen L. 2001. The mating system of Ardisia crenata var. bicolor (Myrsinaceae), a subtropical understory shrub, in Tiantong National Forest Park, Zhejiang Province. Acta Phytoecologica Sinica 25: 161–165.

    CAS  Google Scholar 

  • Chen X.Y. and Song Y.C. 1998. Microgeographic differentiation in a Cyclobalanopsis glauca poplation in western Huangshan, Anhui Province. Journal of Plant Resources Environment 7: 10–14.

    Google Scholar 

  • Chen X.Y., Wang X.H. and Song Y.C. 1997. Genetic diversity and differentiation of Cyclobalanopsis glauca populations in East China. Acta Botanica Sinica 39: 149–155.

    Google Scholar 

  • Cheon C.P., Chung M.Y. and Chung M.G. 2000. Allozyme and clonal diversity in Korean populations of Ardisia japonica and Ardisia crenata (Myrsinaceae). Israel Journal of Plant Science 48: 239–245.

    Article  Google Scholar 

  • Cruzan M. 2001. Population size and fragmentation thresholds for the maintenance of genetic diversity in the herbaceous endemic Scutellaria montana (Lamiaceae). Evolution 55: 1569–1580.

    Article  PubMed  CAS  Google Scholar 

  • Doyle J.J. and Doyle J.L. 1987. A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochemical Bulletin 19: 11–15.

    Google Scholar 

  • Ellstrand N.C. and Elam D.R. 1993. Population genetic consequences of small population size: implications for plant conservation. Annual Review of Ecology and Systematics 24: 217–242.

    Article  Google Scholar 

  • England P.R., Usher A.V., Whelan R.J. and Ayre D.J. 2002. Microsatellite diversity and genetic structure of fragmented populations of the rare, fire-dependent shrub Grevillea macleayana. Molecular Ecology 11: 967–977.

    Article  PubMed  CAS  Google Scholar 

  • Fan X.X., Shen L., Zhang X., Chen X.Y. and Fu C.X. 2004. Assessing genetic diversity of Ginkgo biloba L. (Ginkgoaceae) populations from China by RAPD markers. Biochemical Genetics 42: 269–278.

    Article  PubMed  CAS  Google Scholar 

  • Frankham R., Ballou J.D. and Briscoe D.A. 2002. Introduction to Conservation Genetics. Cambridge University Press, Cambridge.

    Google Scholar 

  • Hall P., Walker S. and Bawa K. 1996. Effect of forest fragmentation on genetic diversity and mating system in a tropical tree, Pithecellobium elegans. Conservation Biology 10: 757–768.

    Article  Google Scholar 

  • Keller L.F. and Waller D.M. 2002. Inbreeding effects in wild populations. Trends in Ecology and Evolution 17: 230–241.

    Article  Google Scholar 

  • Landergott U., Holderegger R., Kozlowski G. and Schneller J. 2001. Historical bottlenecks decrease genetic diversity in natural populations of Dryopteris cristata. Heredity 87: 344–355.

    Article  PubMed  CAS  Google Scholar 

  • Lewontin R.C. 1972. The apportionment of human diversity. Evolutionary Biology 6: 381–398.

    Google Scholar 

  • Li Y.-Y., Chen X.-Y., Zhang X., Wu T.-Y., Lu H.-P. and Cai Y.-W. 2005. Genetic differences between wild and artificial populations of Metasequoia glyptostroboides Hu et Cheng (Taxodiaceae): Implications for species recovery. Conservation Biology 19: 224–231.

    Article  Google Scholar 

  • Lienert J., Fischer M., Schneller J. and Diemer M. 2002. Isozyme variability of the wetland specialist Swertia perennis (Gentianaceae) in relation to habitat size, isolation, and plant fitness. American Journal of Botany 89: 801–811.

    Article  CAS  Google Scholar 

  • Lynch M. and Milligan B.G. 1994. Analysis of population genetic structure with RAPD markers. Molecular Ecology 3: 91–99.

    PubMed  CAS  Google Scholar 

  • Mantel N. 1967. The detection of disease clustering and a generalized regression approach. Cancer Research 27: 209–220.

    PubMed  CAS  Google Scholar 

  • Miller M.P. 1997. Tools for population genetic analyses (TFPGA) v1.3: A windows program for the analysis of allozyme and molecular genetic data. Department of Biological Sciences Northern Arizona University, Flagstaff.

    Google Scholar 

  • Morden C.W. and Loeffler W. 1999. Fragmentation and genetic differentiation among subpopulations of the endangered Hawaiian mint Haplostachys haplostachya (Lamiaceae). Molecular Ecology 8: 617–625.

    Article  Google Scholar 

  • Morris A.B., Baucom R.S. and Cruzan M.B. 2002. Stratified analysis of the soil seed bank in the cedar glade endemic Astragalus bibullatus: Evidence for historical changes in genetic structure. American Journal of Botany 89: 29–36.

    Google Scholar 

  • Nybom H. 2004. Comparison of different nuclear DNA markers for estimating intraspecific genetic diversity in plants. Molecular Ecology 13: 1143–1155.

    Article  PubMed  CAS  Google Scholar 

  • Nybom H. and Bartish I.V. 2000. Effects of life history traits and sampling strategies on genetic diversity estimates obtained with RAPD markers in plants. Perspectives in Plant Ecology, Evolution and Systematics 3/2: 93–114.

    Article  Google Scholar 

  • Raijmann L.E.L., Van Leeuwen N.C., Kersten R., Oostermeijer J.R.B., Den Nijs H.C.M. and Menken S.B.J. 1994. Alleleic variation and outcrossing rate in relation to population size in Gentiana pneumonanthe L. Conservation Biology 8: 1014–1026.

    Article  Google Scholar 

  • Ritland K. 1990. A series of FORTRAN computer programs for estimating plant mating systems. Journal of Heredity 81: 235–237.

    Google Scholar 

  • Saunders D.A., Hobbs R.J. and Margules C.R. 1991. Biological consequences of ecosystem fragmentation: A review. Conservation Biology 5: 18–32.

    Article  Google Scholar 

  • Song Y.C. and Wang X.R. 1995. Vegetation and Flora of Tiantong National Forest Park, Zhejiang Province. Shanghai Scientific Documentary Press, Shanghai.

    Google Scholar 

  • Tansley S.A. and Brown C.R. 2000. RAPD variation in the rare and endangered Leucadendron elimense (Proteaceae): implications for their conservation. Biological Conservation 95: 39–48.

    Article  Google Scholar 

  • Tyler T. 2002. Large-scale geographic patterns of genetic variation in Melica nutans, a widespread Eurasian woodland grass. Plant Syst. Evol. 236: 73–87.

    Article  CAS  Google Scholar 

  • Van Rossum F., De Sousa S.C. and Triest L. 2004. Genetic consequences of habitat fragmentation in an agricultural landscape on the common Primula veris, and comparison with its rare congener, P. vulgaris. Conservation Genetics 5: 231–245.

    Article  Google Scholar 

  • Vandewoestijne S. and Baguette M. 2002. The genetic structure of endangered populations in the Cranberry Fritillary, Boloria aquilonaris (Lepidoptera, Nymphalidae): RAPDs vs allozymes. Heredity 89: 439–445.

    Article  PubMed  CAS  Google Scholar 

  • Yeh F.C., Yang R.C. and Boyle T. 1999. Popgene Version 1.31: Microsoft Window-Based Freeware for Population Genetic Analysis. Department of Renewable Resources, University of Alberta, Edmonton, AB Canada.

    Google Scholar 

  • Young A., Boyle T. and Brown T. 1996. The population genetic consequences of habitat fragmentation for plants. Trends in Ecology and Evolution 11: 413–418.

    Article  Google Scholar 

  • Young A., Merriam H.G. and Warwick S.I. 1993. The effects of forest fragmentation on genetic variation in Acer saccharum Marsh. (sugar maple) populations. Heredity 71: 277–289.

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Editor information

David L. Hawksworth Alan T. Bull

Rights and permissions

Reprints and permissions

Copyright information

© 2006 Springer

About this chapter

Cite this chapter

Zhao, AL., Chen, XY., Zhang, X., Zhang, D. (2006). Effects of fragmentation of evergreen broad-leaved forests on genetic diversity of Ardisia crenata var. bicolor (Myrsinaceae). In: Hawksworth, D.L., Bull, A.T. (eds) Forest Diversity and Management. Topics in Biodiversity and Conservation, vol 2. Springer, Dordrecht. https://doi.org/10.1007/978-1-4020-5208-8_15

Download citation

Publish with us

Policies and ethics