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The Acid Sphingomyelinase Sequence Variant p.A487V Is Not Associated With Decreased Levels of Enzymatic Activity

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Part of the book series: JIMD Reports ((JIMD,volume 8))

Abstract

Rare loss-of-function mutations in the sphingomyelin phosphodiesterase 1 (SMPD1) gene are known to dramatically decrease the catalytic activity of acid sphingomyelinase (ASM), resulting in an autosomal recessive lysosomal storage disorder known as Niemann-Pick disease (NPD) type A and B. In contrast to the general low frequency of those deleterious mutations, we found a relatively high frequency for the proposed type B NPD variant c.1460C>T (p.A487V) in our sample of 58 patients suffering from Major Depressive Disorder. We therefore investigated the biochemical consequences of this variant more closely. Our in vivo data derived from blood cell analyses indicated cellular ASM activity levels in the normal range. The secreted ASM activity levels in blood plasma were slightly lower, but still above those levels reported for type B NPD patients. In vitro expression studies of this ASM variant in different cell lines confirmed these results, showing cellular and secreted enzymatic activities equivalent to those of wild-type ASM and similar expression levels. Thus, we conclude that the ASM variant c.1460C>T (p.A487V) is not a rare missense mutation but an SMPD1 sequence variant that yields a protein with functional catalytic characteristics.

Competing interests: None declared

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Notes

  1. 1.

    According to Schuchman et al. (1991) numbered as A485V, here numbered according to GenBank Accession Number NM_000543.4 as A487V. The difference is due to the polymorphic region coding for the signal peptide of ASM.

References

  • Adzhubei IA, Schmidt S, Peshkin L et al (2010) A method and server for predicting damaging missense mutations. Nat Methods 7(4):248–249

    Article  PubMed  CAS  Google Scholar 

  • Brady RO, Kanfer JN, Mock MB, Fredrickson DS (1966) The metabolism of sphingomyelin. II. Evidence of an enzymatic deficiency in Niemann-Pick disease. Proc Natl Acad Sci U S A 55(2):366–369

    Article  PubMed  CAS  Google Scholar 

  • Bromberg Y, Rost B (2007) SNAP: predict effect of non-synonymous polymorphisms on function. Nucleic Acids Res 35(11):3823–3835

    Article  PubMed  CAS  Google Scholar 

  • Dardis A, Zampieri S, Filocamo M, Burlina A, Bembi B, Pittis MG (2005) Functional in vitro characterization of 14 SMPD1 mutations identified in Italian patients affected by Niemann Pick Type B disease. Hum Mutat 26(2):164

    Article  PubMed  Google Scholar 

  • Desnick JP, Kim J, He X, Wasserstein MP, Simonaro CM, Schuchman EH (2010) Identification and characterization of eight novel SMPD1 mutations causing types A and B Niemann-Pick disease. Mol Med 16(7–8):316–321

    PubMed  CAS  Google Scholar 

  • Ehrhardt C, Schmolke M, Matzke A et al (2006) Polyethylenimine, a cost-effective transfection reagent. Signal Transduction 6:179–184

    Article  CAS  Google Scholar 

  • Harzer K, Rolfs A, Bauer P et al (2003) Niemann-Pick disease type A and B are clinically but also enzymatically heterogeneous: pitfall in the laboratory diagnosis of sphingomyelinase deficiency associated with the mutation Q292 K. Neuropediatrics 34(6):301–306

    Article  PubMed  CAS  Google Scholar 

  • He X, Chen F, Dagan A, Gatt S, Schuchman EH (2003) A fluorescence-based, high-performance liquid chromatographic assay to determine acid sphingomyelinase activity and diagnose types A and B Niemann-Pick disease. Anal Biochem 314(1):116–120

    Article  PubMed  CAS  Google Scholar 

  • Jones I, He X, Katouzian F, Darroch PI, Schuchman EH (2008) Characterization of common SMPD1 mutations causing types A and B Niemann-Pick disease and generation of mutation-specific mouse models. Mol Genet Metab 95(3):152–162

    Article  PubMed  CAS  Google Scholar 

  • Kornhuber J, Medlin A, Bleich S et al (2005) High activity of acid sphingomyelinase in major depression. J Neural Transm 112(11):1583–1590

    Article  PubMed  CAS  Google Scholar 

  • Pavlu-Pereira H, Asfaw B, Poupctova H et al (2005) Acid sphingomyelinase deficiency. Phenotype variability with prevalence of intermediate phenotype in a series of twenty-five Czech and Slovak patients. A multi-approach study. J Inherit Metab Dis 28(2):203–227

    Article  PubMed  CAS  Google Scholar 

  • Pinto R, Caseiro C, Lemos M et al (2004) Prevalence of lysosomal storage diseases in Portugal. Eur J Hum Genet 12(2):87–92

    Article  PubMed  Google Scholar 

  • Ramensky V, Bork P, Sunyaev S (2002) Human non-synonymous SNPs: server and survey. Nucleic Acids Res 30(17):3894–3900

    Article  PubMed  CAS  Google Scholar 

  • Reichel M, Beck J, Mühle C et al (2011) Activity of secretory sphingomyelinase is increased in plasma of alcohol-dependent patients. Alcohol Clin Exp Res 35(10):1852–1859

    Article  PubMed  CAS  Google Scholar 

  • Rhein C, Tripal P, Seebahn A et al (2012) Functional implications of novel human acid sphingomyelinase splice variants. PLoS ONE 7(4):e35467

    Google Scholar 

  • Schuchman EH, Miranda SR (1997) Niemann-Pick disease: mutation update, genotype/phenotype correlations, and prospects for genetic testing. Genet Test 1(1):13–19

    PubMed  CAS  Google Scholar 

  • Schuchman EH, Suchi M, Takahashi T, Sandhoff K, Desnick RJ (1991) Human acid sphingomyelinase. Isolation, nucleotide sequence and expression of the full-length and alternatively spliced cDNAs. J Biol Chem 266(13):8531–8539

    PubMed  CAS  Google Scholar 

  • Simonaro CM, Desnick RJ, McGovern MM, Wasserstein MP, Schuchman EH (2002) The demographics and distribution of type B Niemann-Pick disease: novel mutations lead to new genotype/phenotype correlations. Am J Hum Genet 71(6):1413–1419

    Article  PubMed  CAS  Google Scholar 

  • Wasserstein MP, Aron A, Brodie SE, Simonaro C, Desnick RJ, McGovern MM (2006) Acid sphingomyelinase deficiency: prevalence and characterization of an intermediate phenotype of Niemann-Pick disease. J Pediatr 149(4):554–559

    Article  PubMed  Google Scholar 

  • Wenger DA, Barth G, Githens JH (1977) Nine cases of sphingomyelin lipidosis, a new variant in Spanish-American Children. Juvenile variant of Niemann-Pick Disease with foamy and sea-blue histiocytes. Am J Dis Child 131(9):955–961

    PubMed  CAS  Google Scholar 

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Acknowledgements

We thank Alice Konrad, Michaela Henkel, Sabine Müller, Stefan Hofmann and Michael Kathrein for excellent technical assistance. We are grateful to Sibylle Schwab for helpful discussions.

This work was supported by the German Federal Ministry for Education and Research BMBF (01GI0219; German Research Network on Depression and Suicidality) and by the Scholarship Programme ‘Equality for Women in Research and Teaching’, University Erlangen-Nuremberg (to CR).

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Correspondence to Johannes Kornhuber M.D. .

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Communicated by: Robert Steiner

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Conception and design: CR, MR, JK; Analysis of data: CR, JN, CM, PZ, MR; Interpretation of data: CR, JN, CM, PZ, MR; Drafting of article: CR, MR; Revising manuscript: JN, CM, PZ, UH, CH, RM, HJM, JK; Intellectual input: MA, UH, CH, RM, HJM, JK

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Rhein, C. et al. (2012). The Acid Sphingomyelinase Sequence Variant p.A487V Is Not Associated With Decreased Levels of Enzymatic Activity. In: Zschocke, J., Gibson, K., Brown, G., Morava, E., Peters, V. (eds) JIMD Reports - Case and Research Reports, 2012/5. JIMD Reports, vol 8. Springer, Berlin, Heidelberg. https://doi.org/10.1007/8904_2012_147

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  • DOI: https://doi.org/10.1007/8904_2012_147

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  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-642-33432-0

  • Online ISBN: 978-3-642-33433-7

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