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Applications of Porphyrinoids pp 139–174Cite as

Non-Covalent Interactions of Porphyrinoids with Duplex DNA

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Part of the book series: Topics in Heterocyclic Chemistry ((TOPICS,volume 34))

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Abbreviations

Br8CoTMPyP4:

Tetrakis-N-methylpyridyl-β-octabromo Co(II) porphyrin

CD:

Circular dichroism

cis-H2Pagg:

5,10-Bis(4-N-methylpyridyl)-15,20-diphenyl porphyrin

cis-H2TMPyPipP4:

5,10-Di[4-[1-(4-phenylpiperazine-yl)-acetyloxocarbonyl]- phenyl]-15,20-di(4-N-methylpyridiniumyl)porphine

CT-DNA:

Calf thymus DNA

Cu(2,3-tmtppa)4C:

N,N′,N″,N″-tetramethyltetra-2,3-pyridinoporphyrazinato copper(II)

Cu(3,4-tmtppa)4C:

N,N′,N″,N″-tetramethyltetra-3,4pyridinoporphyrazinato copper(II)

Cu(II)TMPyP4:

5,10,15,20-Tetrakis(4-N-methylpyridyl)Cu(II)porphyrin

CuPz8+:

2,3,7,8,12,13,17,18-Octakis(4-N-methylpyridyl)Cu(II) porphyra zine

DNA:

Deoxyribonucleic acid

Fe(III)TMPyP4:

5,10,15,20-Tetrakis(4-N-methylpyridyl)Fe(III)porphyrin

GeTMPyC:

5,10,15-(4-N-methylpyridyl)Ge(IV)corrole

GQ:

G-quadruplex

H2BisDMImP4:

5,15-Bis(1,3-dimethylimidazolium-2-yl)porphyrin

H2DPDPFPP:

5,15-(4-pyridyl)-10,20-(pentafluorophenyl)porphyrin

H2TButPyP4:

5,10,15,20-Tetrakis(4-N-n-butylpyridyl)porphyrin

H2TDMImP4:

Meso-tetrakis(1,3-dimethylimidazolium-2-yl)porphyrin

H2TDMPzP4:

Meso-tetrakis(1,2-dimethylpyrazolium-4-yl)porphyrin

H2TEtOHPyP4:

5,10,15,20-Tetrakis(4-N-(2-hydroxyethyl)pyridyl)porphyrin

H2TMAP:

5,10,15,20-Tetrakis(4-N,N′,N″-trimethylanilinium)porphyrin

H2TMPyC:

5,10,15-(4-N-methylpyridyl)corrole

H2TMPyCMP4:

5-(4-methoxycarbonylphenyl)-10,15,20-tris(4-N-methylpyridyl) porphyrin

H2TMPyCP4:

5-(4-Carboxyphenyl)-10,15,20-tris(4-N-methylpyridyl)porphyrin

H2TMPyP2:

5,10,15,20-Tetrakis(2-N-methylpyridyl)porphyrin

H2TMPyP4:

5,10,15,20-Tetrakis(4-N-methylpyridyl)porphyrin

H2TMPyPFc:

Tris(4-N-methylpyridiniumyl)mono(phenyl-OCH2CH2ferrocene) porphyrin

H2TMPyPipP4:

5-[4-[1-(4-phenylpiperazine-yl)-acetyloxocarbonyl]phenyl]-10,15,20-tris(4-N-methylpyridiniumyl)porphine

H2TMPyPP4:

5,10,15,20-Tetrakis(N-methyl-4-pyridin-4-yl-phenyl)porphyrin

H2TPPS4:

5,10,15,20-Tetrakis[4-sulfonatophenyl]porphyrin

H2TPrPyP4:

5,10,15,20-Tetrakis(4-N-propylpyridyl)porphyrin

H2TPrPyPP4:

5,10,15,20-Tetrakis{[4-(1-pyridyl)propoxy]phenyl}porphyrin

H2TSPc:

N,N′,N″,N‴-tetrasulfonated phthalocyanines

H2TϑF4TAP:

Meso-tetrakis [2,3,5,6-tetrafluoro-4-(2-trimethylammoniumethyl amine)phenyl]porphyrin

H2TϑOPP4:

Meso-tetrakis[4-[(3-trimethylaminopropyl)oxy]phenyl]porphine

H2TϑPyP4:

Meso-tetrakis[4-N-(3-trimethylaminopropyl)pyridyl]porphine

ICD:

Induced circular dichroism

LD:

Linear dichroism

m-H2TCP4− :

5,10,15,20-Tetrakis[3-(nido-carboranyl)phenyl]porphyrin

MnDMPyFPC:

5,15-(4-N-methylpyridyl)-10-(pentafluorophenyl)Mn(III)corrole

MnTDEtEstPyP4:

5,10,15,20-Tetrakis(4-N-diethylesterepyridyl)Mn(III)porphyrin

MnTMPyC:

5,10,15-(4-N-methylpyridyl)corroleMn(III)

MPIX:

Mesoporphyrin IX

NiTPPS4:

5,10,15,20-Tetrakis[4-sulfonatophenyl] Ni(II) porphyrin

NMM:

N-methylmesoporphyrin IX

NMR:

Nuclear magnetic resonance

p-H2TCP4− :

5,10,15,20-Tetrakis[4-(nido-carboranyl)phenyl]porphyrin

PDT:

Photodynamic therapy

poly(dA–dT):

Poly(deoxyadenylic-deoxythymidylic)acid

poly(dG–dC):

Poly(deoxyguanylic-deoxycytidylic) acid

RLS:

Resonance light scattering

RNA:

Ribonucleic acid

T m :

Melting temperature

trans-H2Pagg:

5,15-Bis(4-N-methylpyridyl)-10,20-diphenyl porphyrin

VCD:

Vibrational circular dichroism

Zn(II)TMPyP4:

5,10,15,20-Tetrakis(4-N-methylpyridyl)Zn(II)porphyrin

ZnPz8+:

2,3,7,8,12,13,17,18-Octakis(4-N-methylpyridyl)Cu(II) porphyra zine

ZnTPPS4:

5,10,15,20-Tetrakis[4-sulfonatophenyl] Zn(II) porphyrin

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  1. Department of Chemical Science, University of Catania, Catania, Italy

    Alessandro D’Urso, Maria Elena Fragalà & Roberto Purrello

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  1. Alessandro D’Urso
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  2. Maria Elena Fragalà
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    Roberto Paolesse

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D’Urso, A., Fragalà, M.E., Purrello, R. (2013). Non-Covalent Interactions of Porphyrinoids with Duplex DNA. In: Paolesse, R. (eds) Applications of Porphyrinoids. Topics in Heterocyclic Chemistry, vol 34. Springer, Berlin, Heidelberg. https://doi.org/10.1007/7081_2013_113

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