Abstract
Cyclin-dependent kinases (CDKs) regulate multiple pathways such as the cell division cycle, apoptosis, transcription, and neuronal functions. Glycogen synthase kinase 3 (GSK-3) plays a key role in Wnt signaling, cellular response to insulin, cell death, cell proliferation, maintenance of “stemness.” Both families of kinases are clearly involved in the onset and development of major human diseases like cancer, neurodegenerative disorders (Alzheimer’s and Parkinson’s disease, stroke), diabetes, restenosis, viral infections, etc. Homologues of these kinases also regulate the proliferation of unicellular parasites. For these reasons an intensive search for pharmacological inhibitors of these protein kinases has been carried out during the last decade. Numerous small molecular weight compounds have been described that directly compete with ATP for binding to the catalytic site of the kinases. We here illustrate the development of this research area by reviewing the paullones, a family of potent and rather selective inhibitors of CDKs and GSK-3, from their discovery and optimisation to their molecular and cellular characterisation. The potential medical applications of CDK/GSK-3 inhibitors are presented.
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References
Adams JA (2001) Kinetic and catalytic mechanisms of protein kinases. Chem Rev 101:2271–2290
Adams JL, Lee D (1999) Recent progress towards the identification of selective inhibitors of serine/threonine protein kinases. Curr Opin Drug Discov Devel 2:96–109
Bain J, McLauchlan H, Elliott M, et al (2003) The specificities of protein kinase inhibitors: an update. Biochem J 371:199–204
Bertrand JA, Thieffine S, Vulpetti A, et al (2003) Structural characterization of the GSK-3β active site using selective and non-selective ATP-mimetic inhibitors. J Mol Biol 333:393–407
Bhat R, Xue Y, Berg S, et al (2003) Structural insights and biological effects of glycogen synthase kinase 3-specific inhibitor AR-A014418. J Biol Chem 278:45937–45945
Bibb JA, Snyder GL, Nishi A, Yan Z, Meijer L, Fienberg AA, Tsai LH, Kwon YT, Girault JA, Czernik AJ, Huganir RL, Hemmings HC Jr, Nairn AC, Greengard P (1999) Phosphorylation of DARPP-32 by Cdk5 modulates dopamine signalling in neurons. Nature 402:669–671
Borgne A, Meijer L (1996) Sequential dephosphorylation of p34(cdc2) on Thr-14 and Tyr-15 at the prophase/metaphase transition. J Biol Chem 271:27847–27854
Bridges AJ (2001) Chemical inhibitors of protein kinases. Chem Rev 101:2541–2571
Capdeville R, Silberman S, Dimitrijevic S (2002a) Imatinib: the first 3 years. Eur J Cancer 38(Suppl 5):77–82
Capdeville R, Buchdunger E, Zimmermann J, et al (2002b) Glivec (STI571, imatinib), a rationally developed, targeted anticancer drug. Nat Rev Drug Discov 1:493–502
Caricasole A (2003) The Wnt pathway, cell-cycle activation and beta-amyloid: novel therapeutic strategies in Alzheimer’s disease? Trends Pharmacol Sci 24:233–238
Cohen P (2001) The role of protein phosphorylation in human health and disease. The Sir Hans Krebs Medal Lecture. Eur J Biochem 268:5001–5010
Cohen P (2002) Protein kinases—the major drug targets of the twenty-first century? Nat Rev Drug Discov 1:309–315
Cohen P, Frame S (2001) The renaissance of GSK3. Nat Rev Mol Cell Biol 2:769–776
Cruz JC, Tseng HC, Goldman JA, et al (2003) Aberrant Cdk5 activation by p25 triggers pathological events leading to neurodegeneration and neurofibrillary tangles. Neuron 40:471–483
De Strooper B, Woodgett J (2003) Alzheimer’s disease: mental plaque removal. Nature 423:392–393
Dhavan R, Tsai L-H (2001) A decade of CDK5. Nat Rev Mol Cell Biol 2:749–759
Doble BW, Woodgett JR (2003) GSK-3: tricks of the trade for a multi-tasking kinase. J Cell Sci 116:1175–1186
Doerig C, Meijer L, Mottram J (2002) Protein kinases as drug targets in parasitic protozoa. Trends Parasitol 18:366–371
Dorronsoro I, Castro A, Martinez A (2002) Inhibitors of glycogen synthase kinase-3: future therapy for unmet medical needs? Expert Opin Ther Patents 12:1527–1536
Droucheau E, Primot A, Thomas V, Mattei D, Knockaert M, Richardson C, Sallicandro P, Alano P, Jafarshad A, Baratte B, Kunick C, Parzy D, Pearl L, Doerig C, Meijer L (2004) Plasmodium falciparum glycogen synthase kinase-3: molecular model, expression, intracellular localisation and selective inhibitors. Biochim Biophys Acta 1697:181–96
Dumas J (2001) Protein kinase inhibitors: emerging pharmacophores 1997–2000. Expert Opin Ther Patents 11:405–429
Eldar-Finkelman H (2002) Glycogen synthase kinase 3: an emerging therapeutic target. Trends Mol Med 8:126–132
Fischer PM (2003) CDK versus GSK-3 inhibition: a purple haze no longer? Chem Biol 10:1144–1146
Fischer PM, Endicott J, Meijer L (2003) Cyclin-dependent kinase inhibitors. Prog Cell Cycle Res 5:235–248
Garcia-Echeverria C, Traxler P, Evans DB (2000) ATP site-directed competitive and irreversible inhibitors of protein kinases. Med Res Rev 20:28–57
Gerber PR (1998) Charge distribution from a simple molecular orbital type calculation and non-bonding interaction terms in the force field MAB. J Comput Aided Mol Des 12:37–51
Godl K, Wissing J, Kurtenbach A, et al (2003) An efficient proteomics method to identify the cellular targets of protein kinase inhibitors. Proc Natl Acad Sci USA 100:15434–15439
Grimes CA, Jope RS (2001) The multifaceted roles of glycogen synthase kinase 3beta in cellular signaling. Prog Neurobiol 65:391–426
Gussio R, Zaharevitz D, McGrath CF, et al (2000) Structure-based design modifications of the paullone molecular scaffold for cyclin-dependent kinase inhibition. Anticancer Drug Des 15: 53–66
Hanks SK (2003) Genomic analysis of the eukaryotic protein kinase superfamily: a perspective. Genome Biol 4:111:1–7
Hardcastle IR, Golding BT, Griffin RJ (2002) Designing inhibitors of cyclin-dependent kinases. Annu Rev Pharmacol Toxicol 42:325–348
Harper JW, Adams PD (2001) Cyclin-dependent kinases. Chem Rev 101:2511–2526
Jackson MD, Denu JM (2001) Molecular reactions of protein phosphatases-insights from structure and chemistry. Chem Rev 101:2313–2340
Kaytor MD, Orr HT (2002) The GSK3 beta signaling cascade and neurodegenerative disease. Curr Opin Neurobiol 12:275–278
Kennelly PJ (2001) Protein phosphatases-a phylogenetic perspective. Chem Rev 101:2291–2312
Knockaert M, Meijer L (2002) Identifying in vivo targets of cyclin-dependent kinase inhibitors by affinity chromatography. Biochem Pharmacol 64:819–825
Knockaert M, Greengard P, Meijer L (2002a) Pharmacological inhibitors of cyclin-dependent kinases. Trends Pharmacol Sci 23:417–425
Knockaert M, Viking K, Schmitt S (2002b) Intracellular targets of paullones. Identification following affinity purification on immobilized inhibitor. J Biol Chem 277:25493–25501
Krupa A, Srinivasan N (2002) The repertoire of protein kinases encoded in the draft version of the human genome: atypical variations and uncommon domain combinations. Genome Biol 3:Research0066.1-006614
Kunick C (1992) Synthese von 7,12-Dihydro-indolo[3,2-d][1]benzazepin-6-(5 H)-onen und 6,11-Dihydro-thieno-[3′,2′:2,3]azepino[4,5-b]indol-5(4 H)-on. Arch Pharm (Weinheim) 325:297–299
Kunick C, Schultz C, Lemcke T (2000) 2-Substituted paullones: CDK1/cyclin B-inhibiting property and in vitro antiproliferative activity. Bioorg Med Chem Lett 10:567–569
Kunick C, Lauenroth K, Wieking K, et al (2004) Evaluation and comparison of 3D-QSAR-models for CDK1, CDK5 and GSK-3 inhibition by paullones. J Med Chem 47:22–36
Lahusen T, De Siervi A, Kunick C (2003) Alsterpaullone, a novel cyclin-dependent kinase inhibitor, induces apoptosis by activation of caspase-9 due to perturbation in mitochondrial membrane potential. Mol Carcinog 36:183–194
Leclerc S, Garnier M, Hoessel R (2001) Indirubins inhibit glycogen synthase kinase-3 beta and CDK5/p25, two protein kinases involved in abnormal tau phosphorylation in Alzheimer’s disease. A property common to most cyclin-dependent kinase inhibitors? J Biol Chem 276:251–260
Leost M, Schultz C, Link A (2000) Paullones are potent inhibitors of glycogen synthase kinase-3beta and cyclin-dependent kinase 5/p25. Eur J Biochem 267:5983–5994
Lyon MA, Ducruet AP, Wipf P, et al (2002) Dual-specificity phosphatases as targets for antineoplastic agents. Nat Rev Drug Discov 1:961–976
Maccioni RB, Otth C, Concha II, et al (2001) The protein kinase Cdk5. Structural aspects, roles in neurogenesis and involvement in Alzheimer’s pathology. Eur J Biochem 268:1518–1527
Malumbres M, Barbacid M (2001) To cycle or not to cycle: a critical decision in cancer. Nat Rev Cancer 1:222–231
Malumbres M, Ortega S, Barbacid M (2000) Genetic analysis of mammalian cyclin-dependent kinases and their inhibitors. Biol Chem 381:827–838
Manning G, Whyte DB, Martinez R, et al (2002) The protein kinase complement of the human genome. Science 298:1912–1934
Martinez A, Castro A, Dorronsoro I, et al (2002) Glycogen synthase kinase 3 (GSK-3) inhibitors as new promising drugs for diabetes, neurodegeneration, cancer, and inflammation. Med Res Rev 22:373–384
Meijer L, Borgne A, Mulner O, et al (1997) Biochemical and cellular effects of roscovitine, a potent and selective inhibitor of the cyclin-dependent kinases cdc2, cdk2 and cdk5. Eur J Biochem 243: 527–536
Meijer L, Skaltsounis AL, Magiatis P, et al (2003) GSK-3 selective inhibitors derived from Tyrian purple indirubins. Chem Biol 10: 1–12
Monaco EA 3rd, Vallano ML (2003) Cyclin-dependent kinase inhibitors: cancer killers to neuronal guardians. Curr Med Chem 10:367–379
Monks A, Scudiero DA, Johnson GS, et al (1997) The NCI anti-cancer drug screen: a smart screen to identify effectors of novel targets. Anti-Cancer Drug Des 12:533–541
Morgan D (1997) Cyclin-dependent kinases: engines, clocks, and microprocessors. Annu Rev Cell Dev Biol 13:261–291
Noble W, Olm V, Takata K, et al (2003) Cdk5 is a key factor in tau aggregation and tangle formation in vivo. Neuron 38:555–565
Oda Y, Owa T, Sato T, et al (2003) Quantitative chemical proteomics for identifying candidate drug targets. Anal Chem 75:2159–2165
Paull KD (1992) Identification of novel antimitotic agents acting at the tubulin level by computer-assisted evaluation of differential cytotoxicity data. Cancer Res 52:3892–3900
Paull KD (1995) Prediction of biochemical mechanism of action from the in vitro antitumor screen of the National Cancer Institute. In: Foye WO (ed) Cancer Chemotherapeutic Agents. American Chemical Society Books, Washington, pp 8–45
Pavletich NP (1999) Mechanisms of cyclin-dependent kinase regulation: structures of Cdks, their cyclin activators, and Cip and INK4 inhibitors. J Mol Biol 287:821–828
Phiel CJ, Wilson CA, Lee VM, et al (2003) GSK-3alpha regulates production of Alzheimer’s disease amyloid-beta peptides. Nature 423:435–439
Primot A, Baratte B, Gompel M, et al (2000) Purification of GSK-3 by affinity chromatography on immobilized axin. Protein Expr Purif 20:394–404
Sausville EA (2002) Complexities in the development of cyclin-dependent kinase inhibitor drugs. Trends Mol Med 8:S32–S37
Schultz C, Link A, Leost M, et al (1999) Paullones, a series of cyclin-dependent kinase inhibitors: synthesis, evaluation of CDK1/cyclin B inhibition, and in vitro antitumor activity. J Med Chem 42:2909–2919
Sim AT, Ludowyke RI (2002) The complex nature of protein phosphatases. IUBMB Life 53:283–286
Smith PD, Crocker SJ, Jackson-Lewis V, et al (2003) Cyclin-dependent kinase 5 is a mediator of dopaminergic neuron loss in a mouse model of Parkinson’s disease. Proc Natl Acad Sci USA 100:13650–13655
Sridhar R, Hanson-Painton O, Cooper DR (2000) Protein kinases as therapeutic targets. Pharm Res 17:1345–1353
Vesely J, Havlicek L, Strnad M, et al (1994) Inhibition of cyclin-dependent kinases by purine analogues. Eur J Biochem 224:771–786
Wang J, Liu SH, Fu YP, et al (2003) Cdk5 activation induces hippocampal CA1 cell death by directly phosphorylating NMDA receptors. Nat Neurosci 6:1039–1047
Wieking K, Knockaert M, Leost M, et al (2002) Synthesis of paullones with aminoalkyl side chains. Arch Pharm (Weinheim) 335:311–317
Zaharevitz D, Gussio R, Leost M, et al (1999) Discovery and initial characterization of the paullones, a novel class of small-molecule inhibitors of cyclin-dependent kinases. Cancer Res 59:2566–2569
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Meijer, L., Leost, M., Lozach, O., Schmitt, S., Kunick, C. (2005). The Paullones: A Family of Pharmacological Inhibitors of Cyclin-Dependent Kinases and Glycogen Synthase Kinase 3. In: Pinna, L.A., Cohen, P.T. (eds) Inhibitors of Protein Kinases and Protein Phosphates. Handbook of Experimental Pharmacology, vol 167. Springer, Berlin, Heidelberg. https://doi.org/10.1007/3-540-26670-4_3
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DOI: https://doi.org/10.1007/3-540-26670-4_3
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