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Path-Equivalent Removals of ε-transitions in a Genomic Weighted Finite Automaton

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Book cover Implementation and Application of Automata (CIAA 2006)

Part of the book series: Lecture Notes in Computer Science ((LNTCS,volume 4094))

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Abstract

Weighted finite automata (WFA) are used with accelerating hardware to scan large genomic banks. Hardwiring such automata raise surface area and clock frequency constraints, requiring efficient ε-transitions-removal techniques. In this paper, we present new bounds on the number of new transitions for several ε-transitions-removal problems. We study the case of acyclic WFA. We introduce a new problem, the partial removal of ε-transitions while accepting short chains of ε-transitions.

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© 2006 Springer-Verlag Berlin Heidelberg

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Giraud, M., Veber, P., Lavenier, D. (2006). Path-Equivalent Removals of ε-transitions in a Genomic Weighted Finite Automaton. In: Ibarra, O.H., Yen, HC. (eds) Implementation and Application of Automata. CIAA 2006. Lecture Notes in Computer Science, vol 4094. Springer, Berlin, Heidelberg. https://doi.org/10.1007/11812128_4

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  • DOI: https://doi.org/10.1007/11812128_4

  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-540-37213-4

  • Online ISBN: 978-3-540-37214-1

  • eBook Packages: Computer ScienceComputer Science (R0)

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