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Genetic Aspects of Cell Line Development from a Synthetic Biology Perspective

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Part of the book series: Advances in Biochemical Engineering Biotechnology ((ABE,volume 127))

Abstract

Animal cells can be regarded as factories for the production of relevant proteins. The advances described in this chapter towards the development of cell lines with higher productivity capacities, certain metabolic and proliferation properties, reduced apoptosis and other features must be regarded in an integrative perspective. The systematic application of systems biology approaches in combination with a synthetic arsenal for targeted modification of endogenous networks are proposed to lead towards the achievement of a predictable and technologically advanced cell system with high biotechnological impact.

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References

  1. Agha-Mohammadi S, O’Malley M, Etemad A, Wang Z, Xiao X, Lotze MT (2004) Second-generation tetracycline-regulatable promoter: repositioned tet operator elements optimize transactivator synergy while shorter minimal promoter offers tight basal leakiness. J Gene Med 6:817–828

    CAS  Google Scholar 

  2. Ailor E, Betenbaugh MJ (1998) Overexpression of a cytosolic chaperone to improve solubility and secretion of a recombinant IgG protein in insect cells. Biotechnol Bioeng 58:196–203

    CAS  Google Scholar 

  3. Akagi K, Kanai M, Saya H, Kozu T, Berns A (2001) A novel tetracycline-dependent transactivator with E2F4 transcriptional activation domain. Nucleic Acids Res 29:E23

    CAS  Google Scholar 

  4. Ali SH, DeCaprio JA (2001) Cellular transformation by SV40 large T antigen: interaction with host proteins. Semin Cancer Biol 11:15–23

    CAS  Google Scholar 

  5. Arden N, Betenbaugh MJ (2004) Life and death in mammalian cell culture: strategies for apoptosis inhibition. Trends Biotechnol 22:174–180

    CAS  Google Scholar 

  6. Aubel D, Fussenegger M (2010) Mammalian synthetic biology—from tools to therapies. BioEssays 32:332–345

    CAS  Google Scholar 

  7. Bach M, Grigat S, Pawlik B, Fork C, Utermöhlen O, Pal S, Banczyk D, Lazar A, Schömig E, Gründemann D(2007) Fast set-up of doxycycline-inducible protein expression in human cell lines with a single plasmid based on Epstein-Barr virus replication and the simple tetracycline repressor. FEBS J 274:783–790

    Google Scholar 

  8. Banaszynski LA, Sellmyer MA, Contag CH, Wandless TJ, Thorne SH (2008) Chemical control of protein stability and function in living mice. Nat Med 14:1123–1127

    CAS  Google Scholar 

  9. Baron U, Freundlieb S, Gossen M, Bujard H (1995) Co-regulation of two gene activities by tetracycline via a bidirectional promoter. Nucleic Acids Res 23:3605–3606

    CAS  Google Scholar 

  10. Baron U, Gossen M, Bujard H (1997) Tetracycline-controlled transcription in eukaryotes: novel transactivators with graded transactivation potential. Nucleic Acids Res 25:2723–2729

    CAS  Google Scholar 

  11. Barquinero J, Eixarch H, Pérez-Melgosa M (2004) Retroviral vectors: new applications for an old tool. Gene Ther 11:S3–S9

    CAS  Google Scholar 

  12. Becker E, Florin L, Pfizenmaier K, Kaufmann H (2008) An XBP-1 dependent bottle-neck in production of IgG subtype antibodies in chemically defined serum-free Chinese hamster ovary (CHO) fed-batch processes. J Biotechnol 135:217–223

    CAS  Google Scholar 

  13. Becskei A, Serrano L (2000) Engineering stability in gene networks by autoregulation. Nature 405:590–593

    CAS  Google Scholar 

  14. Berens C, Hillen W (2003) Gene regulation by tetracyclines: constraints of resistance regulation in bacteria shape TetR for application in eukaryotes. Eur J Biochem 270:3109–3121

    CAS  Google Scholar 

  15. Bi JX, Shuttleworth J, Al-Rubeai M (2004) Uncoupling of cell growth and proliferation results in enhancement of productivity in p21CIP1-arrested CHO cells. Biotechnol Bioeng 85:741–749

    CAS  Google Scholar 

  16. Binley K, Iqball S, Kingsman A, Kingsman S, Naylor S (1999) An adenoviral vector regulated by hypoxia for the treatment of ischaemic disease and cancer. Gene Ther 6:1721–1727

    CAS  Google Scholar 

  17. Blesch A (2004) Lentiviral and MLV based retroviral vectors for ex vivo and in vivo gene transfer. Methods 33:164–172

    CAS  Google Scholar 

  18. Bode J, Benham C, Knopp A, Mielke C (2000) Transcriptional augmentation: modulation of gene expression by scaffold/matrix-attached regions (S/MAR elements). Crit Rev Eukaryot Gene Expr 10:73–90

    CAS  Google Scholar 

  19. Bollati-Fogolin M, Forno G, Nimtz M, Conradt HS, Etcheverrigaray M, Kratje R (2005) Temperature reduction in cultures of hGM-CSF-expressing CHO cells: effect on productivity and product quality. Biotechnol Prog 21:17–21

    CAS  Google Scholar 

  20. Boorsma M, Nieba L, Koller D, Bachmann MF, Bailey JE, Renner WA (2000) A temperature-regulated replicon-based DNA expression system. Nat Biotechnol 18:429–432

    CAS  Google Scholar 

  21. Boorsma M, Hoenke S, Marrero A, Fischer R, Bailey JE, Renner WA, Bachmann MF (2002) Bioprocess applications of a Sindbis virus-based temperature-inducible expression system. Biotechnol Bioeng 79:602–609

    CAS  Google Scholar 

  22. Bornkamm GW, Berens C, Kuklik-Roos C, Bechet JM, Laux G, Bachl J, Korndoerfer M, Schlee M, Hölzel M, Malamoussi A, Chapman RD, Nimmerjahn F, Mautner J, Hillen W, Bujard H, Feuillard J (2005) Stringent doxycycline-dependent control of gene activities using an episomal one-vector system. Nucleic Acids Res 33:1–11

    Google Scholar 

  23. Borth N, Mattanovich D, Kunert R, Katinger H (2005) Effect of increased expression of protein disulfide isomerase and heavy chain binding protein on antibody secretion in a recombinant CHO cell line. Biotechnol Prog 21:106–111

    CAS  Google Scholar 

  24. Braselmann S, Graninger P, Busslinger M (1993) A selective transcriptional induction system for mammalian cells based on Gal4-estrogen receptor fusion proteins. Proc Natl Acad Sci U S A 90:1657–1661

    CAS  Google Scholar 

  25. Büning H, Nicklin SA, Perabo L, Hallek M, Baker AH (2003) AAV-based gene transfer. Curr Opin Mol Ther 5:367–375

    Google Scholar 

  26. Burcin MM, O’Malley BW, Tsai SY (1998) A regulatory system for target gene expression. Front Biosci J Virtual Library 3:c1–c7

    CAS  Google Scholar 

  27. Carvalhal AV, Moreira JL, Carrondo MJ (2001) Strategies to modulate BHK cell proliferation by the regulation of IRF-1 expression. J Biotechnol 92:47–59

    CAS  Google Scholar 

  28. Carvalhal AV, Marcelino I, Carrondo MJ (2003) Metabolic changes during cell growth inhibition by p27 overexpression. Appl Microbiol Biotechnol 63:164–173

    CAS  Google Scholar 

  29. Cho SY, Lee JH, Bae HD, Jeong EM, Jang GY, Kim CW, Shin DM, Jeon JH, Kim IG (2010) Transglutaminase 2 inhibits apoptosis induced by calcium overload through down-regulation of Bax. Exp Mol Med 42:639–650

    CAS  Google Scholar 

  30. Chung JY, Lim SW, Hong YJ, Hwang SO, Lee GM (2004) Effect of doxycycline-regulated calnexin and calreticulin expression on specific thrombopoietin productivity of recombinant Chinese hamster ovary cells. Biotechnol Bioeng 85:539–546

    CAS  Google Scholar 

  31. Danke C, G\(\ddot{\hbox{r}}\)unz X, Wittmann J, Schmidt A, Agha-Mohammadi S, Kutsch O, Jäck HM, Hillen W, Berens C (2010) Adjusting transgene expression levels in lymphocytes with a set of inducible promoters. J Gene Med 12:501–515

    Google Scholar 

  32. Davey RE, Onishi K, Mahdavi A, Zandstra PW (2007) LIF-mediated control of embryonic stem cell self-renewal emerges due to an autoregulatory loop. FASEB J 21:2020–2032

    CAS  Google Scholar 

  33. Deans TL, Cantor CR, Collins JJ (2007) A tunable genetic switch based on RNAi and repressor proteins for regulating gene expression in mammalian cells. Cell 130:363–372

    CAS  Google Scholar 

  34. Deuschle U, Meyer WKH, Thiesen HJ (1995) Tetracycline-reversible silencing of eukaryotic promoters. Mol Cell Biol 15:1907–1914

    CAS  Google Scholar 

  35. deZengotita VM, Schmelzer AE, Miller WM (2002) Characterization of hybridoma cell responses to elevated pCO(2) and osmolality: intracellular pH, cell size, apoptosis, and metabolism. Biotechnol Bioeng 77:369–380

    CAS  Google Scholar 

  36. Dorai H, Ellis D, Keung YS, Campbell M, Zhuang M, Lin C, Betenbaugh MJ (2010) Combining high-throughput screening of caspase activity with anti-apoptosis genes for development of robust CHO production cell lines. Biotechnol Prog 26:1367–1381

    CAS  Google Scholar 

  37. Ehrhardt A, Haase R, Schepers A, Deutsch MJ, Lipps HJ, Baiker A (2008) Episomal vectors for gene therapy. Curr Gene Ther 8:147–161

    CAS  Google Scholar 

  38. Eilers M, Picard D, Yamamoto KR, Bishop JM (1989) Chimaeras of myc oncoprotein and steroid receptors cause hormone-dependent transformation of cells. Nature 340:66–68

    CAS  Google Scholar 

  39. Ellgaard L, Helenius A (2003) Quality control in the endoplasmic reticulum. Nat Rev Mol Cell Biol 4:181–191

    CAS  Google Scholar 

  40. Elowitz MB, Leibler S (2000) A synthetic oscillatory network of transcriptional regulators. Nature 403:335–338

    CAS  Google Scholar 

  41. Ertel A, Tozeren A (2008) Human and mouse switch-like genes share common transcriptional regulatory mechanisms for bimodality. BMC Genomics 9:628

    Google Scholar 

  42. Feil R, Wagner J, Metzger D, Chambon P (1997) Regulation of Cre recombinase activity by mutated estrogen receptor ligand-binding domains. Biochem Biophys Res Commun 237:752–757

    CAS  Google Scholar 

  43. Fiore M, Zanier R, Degrassi F (2002) Reversible G(1) arrest by dimethyl sulfoxide as a new method to synchronize Chinese hamster cells. Mutagenesis 17:419–424

    CAS  Google Scholar 

  44. Florin L, Pegel A, Becker E, Hausser A, Olayioye MA, Kaufmann H (2009) Heterologous expression of the lipid transfer protein CERT increases therapeutic protein productivity of mammalian cells. J Biotechnol 141:84–90

    CAS  Google Scholar 

  45. Forster K, Helbl V, Lederer T, Urlinger S, Wittenburg N, Hillen W (1999) Tetracycline-inducible expression systems with reduced basal activity in mammalian cells. Nucleic Acids Res 27:708–710

    CAS  Google Scholar 

  46. Fox SR, Patel UA, Yap MG, Wang DI (2004) Maximizing interferon-gamma production by Chinese hamster ovary cells through temperature shift optimization: experimental and modeling. Biotechnol Bioeng 85:177–184

    CAS  Google Scholar 

  47. Fox SR, Tan HK, Tan MC, Wong SC, Yap MG, Wang DI (2005) A detailed understanding of the enhanced hypothermic productivity of interferon-gamma by Chinese-hamster ovary cells. Biotechnol Appl Biochem 41:255–264

    CAS  Google Scholar 

  48. Fraser MJ, Ciszczon T, Elick T, Bauser C (1996) Precise excision of TTAA-specific lepidopteran transposons piggyBac (IFP2) and tagalong (TFP3) from the baculovirus genome in cell lines from two species of Lepidoptera. Insect Mol Biol 5:141–151

    CAS  Google Scholar 

  49. Freundlieb S, Schirra-Müller C, Bujard H (1999) A tetracycline controlled activation/repression system with increased potential for gene transfer into mammalian cells. J Gene Med 1:4–12

    CAS  Google Scholar 

  50. Fussenegger M (2001) The impact of mammalian gene regulation concepts on functional genomic research, metabolic engineering, and advanced gene therapies. Biotechnol Prog 17:1–51

    CAS  Google Scholar 

  51. Fussenegger M, Mazur X, Bailey JE (1997) A novel cytostatic process enhances the productivity of Chinese hamster ovary cells. Biotechnol Bioeng 55:927–939

    CAS  Google Scholar 

  52. Fussenegger M, Mazur X, Bailey JE (1998a) pTRIDENT, a novel vector family for tricistronic gene expression in mammalian cells. Biotechnol Bioeng 57:1–10

    CAS  Google Scholar 

  53. Fussenegger M, Schlatter S, Datwyler D, Mazur X, Bailey JE (1998b) Controlled proliferation by multigene metabolic engineering enhances the productivity of Chinese hamster ovary cells. Nat Biotechnol 16:468–472

    CAS  Google Scholar 

  54. Gama-Norton L, Riemer P, Sandhu U, Nehlsen K, Schucht R, Hauser H, Wirth D (2009) Defeating randomness—targeted integration as a boost for biotechnology. In: Al-Rubeai M (ed) Cell engineering. Springer, London

    Google Scholar 

  55. Gama-Norton L, Herrmann S, Schucht R, Coroadinha AS, Low R, Alves PM, Bartholomae CC, Schmidt M, Baum C, Schambach A, Hauser H, Wirth D (2010) Retroviral vector performance in defined chromosomal loci of modular packaging cell lines. Hum Gene Ther 21:979–991

    CAS  Google Scholar 

  56. Geserick C, Bonarius HP, Kongerslev L, Hauser H, Mueller PP (2000) Enhanced productivity during controlled proliferation of BHK cells in continuously perfused bioreactors. Biotechnol Bioeng 69:266–274

    CAS  Google Scholar 

  57. Ghani K, Cottin S, Kamen A, Caruso M (2007) Generation of a high-titer packaging cell line for the production of retroviral vectors in suspension and serum-free media. Gene Ther 14:1705–1711

    CAS  Google Scholar 

  58. Gibson DG, Glass JI, Lartigue C, Noskov VN, Chuang RY, Algire MA, Benders GA, Montague MG, Ma L, Moodie MM, Merryman C, Vashee S, Krishnakumar R, Assad-Garcia N, Andrews-Pfannkoch C, Denisova EA, Young L, Qi ZQ, Segall-Shapiro TH, Calvey CH, Parmar PP, Hutchison CA III, Smith HO, Venter JC (2010) Creation of a bacterial cell controlled by a chemically synthesized genome. Science 329:52–56

    CAS  Google Scholar 

  59. Gill G, Ptashne M (1988) Negative effect of the transcriptional activator GAL4. Nature 334:721–724

    CAS  Google Scholar 

  60. Gitzinger M, Kemmer C, El-Baba MD, Weber W, Fussenegger M (2009) Controlling transgene expression in subcutaneous implants using a skin lotion containing the apple metabolite phloretin. Proc Natl Acad Sci U S A 106:10638–10643

    CAS  Google Scholar 

  61. Glaß M, Busche A, Wagner K, Messerle M, Borst EM (2009) Conditional and reversible disruption of essential herpesvirus proteins. Nat Methods 6:577–579

    Google Scholar 

  62. Go WY, Ho SN (2002) Optimization and direct comparison of the dimerizer and reverse tet transcriptional control systems. J Gene Med 4:258–270

    Google Scholar 

  63. Gossen M, Bujard H (1992) Tight control of gene expression in mammalian cells by tetracycline- responsive promoters. Proc Natl Acad Sci U S A 89:5547–5551

    CAS  Google Scholar 

  64. Gossen M, Freundlieb S, Bender G, Muller G, Hillen W, Bujard H (1995) Transcriptional activation by tetracyclines in mammalian cells. Science 268:1766–1769

    CAS  Google Scholar 

  65. Greber D, Fussenegger M (2007) Mammalian synthetic biology: engineering of sophisticated gene networks. J Biotechnol 130:329–345

    CAS  Google Scholar 

  66. Hampf M, Gossen M (2007) Promoter crosstalk effects on gene expression. J Mol Biol 365:911–920

    CAS  Google Scholar 

  67. Hanada K, Kumagai K, Yasuda S, Miura Y, Kawano M, Fukasawa M, Nishijima M (2003) Molecular machinery for non-vesicular trafficking of ceramide. Nature 426:803–809

    CAS  Google Scholar 

  68. Hartenbach S, Daoud-El Baba M, Weber W, Fussenegger M (2007) An engineered L-arginine sensor of Chlamydia pneumoniae enables arginine-adjustable transcription control in mammalian cells and mice. Nucleic Acids Res 35:e136

    Google Scholar 

  69. Hayter PM, Curling EM, Baines AJ, Jenkins N, Salmon I, Strange PG, Bull AT (1991) Chinese hamster ovary cell growth and interferon production kinetics in stirred batch culture. Appl Microbiol Biotechnol 34:559–564

    CAS  Google Scholar 

  70. Heinz N, Schambach A, Galla M, Maetzig T, Baum C, Loew R, Schiedlmeier B (2010) Retroviral and transposon-based tet-regulated all-in-one vectors with reduced background expression and improved dynamic range. Hum Gene Ther 22:166–176

    Google Scholar 

  71. Hendrick V, Winnepenninckx P, Abdelkafi C, Vandeputte O, Cherlet M, Marique T, Renemann G, Loa A, Kretzmer G, Werenne J (2001) Increased productivity of recombinant tissular plasminogen activator (t-PA) by butyrate and shift of temperature: a cell cycle phases analysis. Cytotechnology 36:71–83

    CAS  Google Scholar 

  72. Hofmann A, Nolan GP, Blau HM (1996) Rapid retroviral delivery of tetracycline-inducible genes in a single autoregulatory cassette. Proc Natl Acad Sci U S A 93:5185–5190

    CAS  Google Scholar 

  73. Hu MC, Davidson N (1987) The inducible lac operator-repressor system is functional in mammalian cells. Cell 48:555–566

    CAS  Google Scholar 

  74. Hunter NL, Awatramani RB, Farley FW, Dymecki SM (2005) Ligand-activated Flpe for temporally regulated gene modifications. Genesis 41:99–109

    CAS  Google Scholar 

  75. Ibarra N, Watanabe S, Bi JX, Shuttleworth J, Al-Rubeai M (2003) Modulation of cell cycle for enhancement of antibody productivity in perfusion culture of NS0 cells. Biotechnol Prog 19:224–228

    CAS  Google Scholar 

  76. Ito K, Ueda Y, Kokubun M, Urabe M, Inaba T, Mano H, Hamada H, Kitamura T, Mizoguchi H, Sakata T, Hasegawa M, Ozawa K (1997) Development of a novel selective amplifier gene for controllable expansion of transduced hematopoietic cells. Blood 90:3884–3892

    CAS  Google Scholar 

  77. Ivics Z, Hackett PB, Plasterk RH, Izsvák Z (1997) Molecular reconstruction of sleeping beauty, a Tc1-like transposon from fish, and its transposition in human cells. Cell 91:501–510

    CAS  Google Scholar 

  78. Izsvák Z, Chuah MKL, VandenDriessche T, Ivics Z (2009) Efficient stable gene transfer into human cells by the Sleeping Beauty transposon vectors. Methods 49:287–297

    Google Scholar 

  79. Jat PS, Noble MD, Ataliotis P, Tanaka Y, Yannoutsos N, Larsen L, Kioussis D (1991) Direct derivation of conditionally immortal cell lines from an H-2Kb-tsA58 transgenic mouse. Proc Natl Acad Sci U S A 88:5096–5100

    CAS  Google Scholar 

  80. Jenkins N, Meleady P, Tyther R, Murphy L (2009) Strategies for analysing and improving the expression and quality of recombinant proteins made in mammalian cells. Biotechnol Appl Biochem 53:73–83

    CAS  Google Scholar 

  81. Kaufmann H, Mazur X, Fussenegger M, Bailey JE (1999) Influence of low temperature on productivity, proteome and protein phosphorylation of CHO cells. Biotechnol Bioeng 63:573–582

    CAS  Google Scholar 

  82. Kellendonk C, Tronche F, Monaghan AP, Angrand PO, Stewart F, Schutz G (1996) Regulation of Cre recombinase activity by the synthetic steroid RU 486. Nucleic Acids Res 24:1404–1411

    CAS  Google Scholar 

  83. Kemmer C, Gitzinger M, Daoud-El Baba M, Djonov V, Stelling J, Fussenegger M (2010) Self-sufficient control of urate homeostasis in mice by a synthetic circuit. Nat Biotechnol 28:355–360

    CAS  Google Scholar 

  84. Kiel C, Yus E, Serrano L (2010) Engineering signal transduction pathways. Cell 140:33–47

    CAS  Google Scholar 

  85. Kirchhoff S, Schaper F, Hauser H (1993) Interferon regulatory factor 1 (IRF-1) mediates cell growth inhibition by transactivation of downstream target genes. Nucleic Acids Res 21:2881–2889

    CAS  Google Scholar 

  86. Kiyono T, Foster SA, Koop JI, McDougall JK, Galloway DA, Klingelhutz AJ (1998) Both Rb/p16INK4a inactivation and telomerase activity are required to immortalize human epithelial cells. Nature 396:84–88

    CAS  Google Scholar 

  87. Klug A. (2010) The discovery of zinc fingers and their applications in gene regulation and genome manipulation. Annu Rev Biochem 79:213–231

    CAS  Google Scholar 

  88. Koga A, Suzuki M, Inagaki H, Bessho Y, Hori H (1996) Transposable element in fish [11]. Nature 383:30

    CAS  Google Scholar 

  89. Köster M, Kirchhoff S, Schaper F, Hauser H (1995) Proliferation control of mammalian cells by the tumor suppressor IRF-1. Cytotechnology18:67–75

    Google Scholar 

  90. Kramer BP, Fussenegger M (2005) Hysteresis in a synthetic mammalian gene network. Proc Natl Acad Sci U S A 102:9517–9522

    CAS  Google Scholar 

  91. Kramer BP, Weber W, Fussenegger M (2003) Artificial regulatory networks and cascades for discrete multilevel transgene control in mammalian cells. Biotechnol Bioeng 83:810–820

    CAS  Google Scholar 

  92. Kramer BP, Viretta AU, Baba MDE, Aubel D, Weber W, Fussenegger M (2004) An engineered epigenetic transgene switch in mammalian cells. Nat Biotechnol 22:867–870

    CAS  Google Scholar 

  93. Kramer BP, Fischer M, Fussenegger M (2005) Semi-synthetic mammalian gene regulatory networks. Metab Eng 7:241–250

    CAS  Google Scholar 

  94. Kraunus J, Schaumann DH, Meyer J, Modlich U, Fehse B, Brandenburg G, von Laer D, Klump H, Schambach A, Bohne J, Baum C (2004) Self-inactivating retroviral vectors with improved RNA processing. Gene Ther 11:1568–1578

    CAS  Google Scholar 

  95. Kroger A, Koster M, Schroeder K, Hauser H, Mueller PP (2002) Activities of IRF-1. J Interferon Cytokine Res 22:5–14

    CAS  Google Scholar 

  96. Kühnel F, Fritsch C, Krause S, Mundt B, Wirth T, Paul Y, Malek NP, Zender L, Manns MP, Kubicka S (2004) Doxycycline regulation in a single retroviral vector by an autoregulatory loop facilitates controlled gene expression in liver cells. Nucleic Acids Res 32:e30

    Google Scholar 

  97. Kume A, Koremoto M, Xu R, Okada T, Mizukami H, Hanazono Y, Hasegawa M, Ozawa K (2003) In vivo expansion of transduced murine hematopoietic cells with a selective amplifier gene. J Gene Med 5:175–181

    CAS  Google Scholar 

  98. Langley RR, Ramirez KM, Tsan RZ, Van Arsdall M, Nilsson MB, Fidler IJ (2003) Tissue-specific microvascular endothelial cell lines from H-2K(b)-tsA58 mice for studies of angiogenesis and metastasis. Cancer Res 63:2971–2976

    CAS  Google Scholar 

  99. Langley RR, Fan D, Guo L, Zhang C, Lin Q, Brantley EC, McCarty JH, Fidler IJ (2009) Generation of an immortalized astrocyte cell line from H-2Kb-tsA58 mice to study the role of astrocytes in brain metastasis. Int J Oncol 35:665–672

    CAS  Google Scholar 

  100. Levskaya A, Weiner OD, Lim WA, Voigt CA (2009) Spatiotemporal control of cell signalling using a light-switchable protein interaction. Nature 461:997–1001

    CAS  Google Scholar 

  101. Li Q, Peterson KR, Fang X, Stamatoyannopoulos G (2002) Locus control regions. Blood 100:3077–3086

    CAS  Google Scholar 

  102. Lim SF, Chuan KH, Liu S, Loh SO, Chung BY, Ong CC, Song Z (2006) RNAi suppression of Bax and Bak enhances viability in fed-batch cultures of CHO cells. Metab Eng 8:509–522

    CAS  Google Scholar 

  103. Liu C, Chu I, Hwang S (2001) Pentanoic acid, a novel protein synthesis stimulant for Chinese hamster ovary (CHO) cells. J Biosci Bioeng 91:71–75

    CAS  Google Scholar 

  104. Lloyd DR, Holmes P, Jackson LP, Emery AN, Al-Rubeai M (2000) Relationship between cell size, cell cycle and specific recombinant protein productivity. Cytotechnology 34:59–70

    CAS  Google Scholar 

  105. Loew R, Vigna E, Lindemann D, Naldini L, Bujard H (2006) Retroviral vectors containing Tet-controlled bidirectional transcription units for simultaneous regulation of two gene activities. J Mol Genet Med 2:107–118

    Google Scholar 

  106. Loew R, Meyer Y, Kuehlcke K, Gama-Norton L, Wirth D, Hauser H, Stein S, Grez M, Thornhill S, Thrasher A, Baum C, Schambach A (2010) A new PG13-based packaging cell line for stable production of clinical-grade self-inactivating gamma-retroviral vectors using targeted integration. Gene Ther 17:272–280

    CAS  Google Scholar 

  107. Logie C, Stewart AF (1995) Ligand-regulated site-specific recombination. Proc Natl Acad Sci U S A 92:5940–5944

    CAS  Google Scholar 

  108. Lufino MMP, Edser PAH, Wade-Martins R (2008) Advances in high-capacity extrachromosomal vector technology: episomal maintenance, vector delivery, and transgene expression. Mol Ther 16:1525–1538

    CAS  Google Scholar 

  109. Major MB, Camp ND, Berndt JD, Yi X, Goldenberg SJ, Hubbert C, Biechele TL, Gingras AC, Zheng N, Maccoss MJ, Angers S, Moon RT (2007) Wilms tumor suppressor WTX negatively regulates WNT/beta-catenin signaling. Science 316:1043–1046

    CAS  Google Scholar 

  110. Malphettes L, Fussenegger M (2006) Improved transgene expression fine-tuning in mammalian cells using a novel transcription-translation network. J Biotechnol 124:732–746

    CAS  Google Scholar 

  111. Malphettes L, Weber CC, El-Baba MD, Schoenmakers RG, Aubel D, Weber W, Fussenegger M (2005) A novel mammalian expression system derived from components coordinating nicotine degradation in arthrobacter nicotinovorans pAO1. Nucleic Acids Res 33:e107

    Google Scholar 

  112. Margolin JF, Friedman JR, Meyer WKH, Vissing H, Thiesen HJ, Rauscher Iii FJ (1994) Kruppel-associated boxes are potent transcriptional repression domains. Proc Natl Acad Sci U S A 91:4509–4513

    CAS  Google Scholar 

  113. Markusic D, Seppen J (2010) Doxycycline regulated lentiviral vectors. Meth Mol Biol 614:69–76

    CAS  Google Scholar 

  114. Markusic D, Oude-Elferink R, Das AT, Berkhout B, Seppen J (2005) Comparison of single regulated lentiviral vectors with rtTA expression driven by an autoregulatory loop or a constitutive promoter. Nucleic Acids Res 33:e63

    Google Scholar 

  115. Mátrai J, Chuah MK, Vandendriessche T (2010) Recent advances in lentiviral vector development and applications. Mol Ther 18:477–490

    Google Scholar 

  116. May T, Hauser H, Wirth D (2004a) Transcriptional control of SV40 T-antigen expression allows a complete reversion of immortalization. Nucleic Acids Res 32:5529–5538

    CAS  Google Scholar 

  117. May T, Lindenmaier W, Wirth D, Mueller PP (2004b) Application of a reversible immortalization system for the generation of proliferation-controlled cell lines. Cytotechnology 46:69–78

    Google Scholar 

  118. May T, Mueller PP, Weich H, Froese N, Deutsch U, Wirth D, Kroger A, Hauser H (2005) Establishment of murine cell lines by constitutive and conditional immortalization. J Biotechnol 120:99–110

    CAS  Google Scholar 

  119. May T, Hauser H, Wirth D (2006) Current status of transcriptional regulation systems. Cytotechnology 50:109–119

    CAS  Google Scholar 

  120. May T, Eccleston L, Herrmann S, Hauser H, Goncalves J, Wirth D (2008) Bimodal and hysteretic expression in mammalian cells from a synthetic gene circuit. PLoS One 3:e2372

    Google Scholar 

  121. May T, Butueva M, Bantner S, Marcusic D, Seppen J, Weich H, Hauser H, Wirth D (2010) Synthetic gene regulation circuits for control of cell expansion. Tissue Eng Part A 16:441–452

    CAS  Google Scholar 

  122. Mazur X, Fussenegger M, Renner WA, Bailey JE (1998) Higher productivity of growth-arrested Chinese hamster ovary cells expressing the cyclin-dependent kinase inhibitor p27. Biotechnol Prog 14:705–713

    CAS  Google Scholar 

  123. Mezhir JJ, Smith KD, Posner MC, Senzer N, Yamini B, Kufe DW, Weichselbaum RR (2006) Ionizing radiation: a genetic switch for cancer therapy. Cancer Gene Ther 13:1–6

    CAS  Google Scholar 

  124. Miller AD (2001) Production of retroviral vectors. Curr Protoc Hum Genet Chap 12: Unit 12–15

    Google Scholar 

  125. Miskey C, Izsvák Z, Plasterk RH, Ivics Z (2003) The frog prince: a reconstructed transposon from Rana pipiens with high transpositional activity in vertebrate cells. Nucleic Acids Res 31:6873–6881

    CAS  Google Scholar 

  126. Mohan C, Park SH, Chung JY, Lee GM (2007) Effect of doxycycline-regulated protein disulfide isomerase expression on the specific productivity of recombinant CHO cells: thrombopoietin and antibody. Biotechnol Bioeng 98:611–615

    CAS  Google Scholar 

  127. Moosmann P, Georgiev O, Thiesen HJ, Hagmann M, Schaffner W (1997) Silencing of RNA polymerases II and III-dependent transcription by the KRAB protein domain of KOX1, a Kruppel-type zinc finger factor. Biol Chem 378:669–677

    CAS  Google Scholar 

  128. Morgan JE, Beauchamp JR, Pagel CN, Peckham M, Ataliotis P, Jat PS, Noble MD, Farmer K, Partridge TA (1994) Myogenic cell lines derived from transgenic mice carrying a thermolabile T antigen: a model system for the derivation of tissue-specific and mutation-specific cell lines. Dev Biol 162:486–498

    CAS  Google Scholar 

  129. Mullick A, Xu Y, Warren R, Koutroumanis M, Guilbault C, Broussau S, Malenfant F, Bourget L, Lamoureux L, Lo R, Caron AW, Pilotte A, Massie B (2006) The cumate gene-switch: a system for regulated expression in mammalian cells. BMC Biotechnol 6:43

    Google Scholar 

  130. Neddermann P, Gargioli C, Muraglia E, Sambucini S, Bonelli F, De Francesco R, Cortese R (2003) A novel, inducible, eukaryotic gene expression system based on the quorum-sensing transcription factor TraR. EMBO Rep 4:159–165

    CAS  Google Scholar 

  131. Nehlsen K, Schucht R, da Gama-Norton L, Kromer W, Baer A, Cayli A, Hauser H, Wirth D (2009) Recombinant protein expression by targeting pre-selected chromosomal loci. BMC Biotechnol 9:100

    Google Scholar 

  132. Ngan ESW, Schillinger K, DeMayo F, Tsai SY (2002) The mifepristone-inducible gene regulatory system in mouse models of disease and gene therapy. Semin Cell Dev Biol 13:143–149

    CAS  Google Scholar 

  133. Nishimura K, Fukagawa T, Takisawa H, Kakimoto T, Kanemaki M (2009) An auxin-based degron system for the rapid depletion of proteins in nonplant cells. Nat Methods 6:917–922

    CAS  Google Scholar 

  134. No D, Yao TP, Evans RM (1996) Ecdysone-inducible gene expression in mammalian cells and transgenic mice. Proc Natl Acad Sci U S A 93:3346–3351

    CAS  Google Scholar 

  135. Nordstrom JL (2002) Antiprogestin-controllable transgene regulation in vivo. Curr Opin Biotechnol 13:453–458

    CAS  Google Scholar 

  136. Palais G, Cat AND, Friedman H, Panek-Huet N, Millet A, Tronche F, Gellen B, Mercadier JJ, Peterson A, Jaisser F (2009) Targeted transgenesis at the HPRT locus: an efficient strategy to achieve tightly controlled in vivo conditional expression with the tet system. Physiol Genom 37:140–146

    CAS  Google Scholar 

  137. Pamment J, Ramsay E, Kelleher M, Dornan D, Ball KL (2002) Regulation of the IRF-1 tumour modifier during the response to genotoxic stress involves an ATM-dependent signalling pathway. Oncogene 21:7776–7785

    CAS  Google Scholar 

  138. Pathak A, Patnaik S, Gupta KC (2009) Recent trends in non-viral vector-mediated gene delivery. Biotechnol J 4:1559–1572

    CAS  Google Scholar 

  139. Perani A, Singh RP, Chauhan R, Al-Rubeai M (1998) Variable functions of bcl-2 in mediating bioreactor stress-induced apoptosis in hybridoma cells. Cytotechnology 28:177–188

    CAS  Google Scholar 

  140. Picard D (1994) Regulation of protein function through expression of chimaeric proteins. Curr Opin Biotechnol 5:511–515

    CAS  Google Scholar 

  141. Pichon C, Billiet L, Midoux P (2010) Chemical vectors for gene delivery: uptake and intracellular trafficking. Curr Opin Biotechnol 21:640–645

    CAS  Google Scholar 

  142. Pruett-Miller SM, Connelly JP, Maeder ML, Joung JK, Porteus MH (2008) Comparison of zinc finger nucleases for use in gene targeting in mammalian cells. Mol Ther 16:707–717

    CAS  Google Scholar 

  143. Pryciak PM (2009) Designing new cellular signaling pathways. Chem Biol 16:249–254

    CAS  Google Scholar 

  144. Rinaudo K, Bleris L, Maddamsetti R, Subramanian S, Weiss R, Benenson Y (2007) A universal RNAi-based logic evaluator that operates in mammalian cells. Nat Biotechnol 25:795–801

    CAS  Google Scholar 

  145. Romeo G, Fiorucci G, Chiantore MV, Percario ZA, Vannucchi S, Affabris E (2002) IRF-1 as a negative regulator of cell proliferation. J Interferon Cytokine Res 22:39–47

    CAS  Google Scholar 

  146. Rowan S, Ludwig RL, Haupt Y, Bates S, Lu X, Oren M, Vousden KH (1996) Specific loss of apoptotic but not cell-cycle arrest function in a human tumor derived p53 mutant. Embo J 15:827–838

    CAS  Google Scholar 

  147. Rybkin II, Markham DW, Yan Z, Bassel-Duby R, Williams RS, Olson EN (2003) Conditional expression of SV40 T-antigen in mouse cardiomyocytes facilitates an inducible switch from proliferation to differentiation. J Biol Chem 278:15927–15934

    CAS  Google Scholar 

  148. Salmon P, Oberholzer J, Occhiodoro T, Morel P, Lou J, Trono D (2000) Reversible immortalization of human primary cells by lentivector-mediated transfer of specific genes. Mol Ther 2:404–414

    CAS  Google Scholar 

  149. Sandhu U, Cebula M, Behme S, Riemer P, Wodarczyk C, Metzger D, Reimann J, Schirmbeck R, Hauser H, Wirth D (2010) Strict control of transgene expression in a mouse model for sensitive biological applications based on RMCE compatible ES cells. Nucleic acids Res 39:e1

    Google Scholar 

  150. Sauerwald TM, Betenbaugh MJ, Oyler GA (2002) Inhibiting apoptosis in mammalian cell culture using the caspase inhibitor XIAP and deletion mutants. Biotechnol Bioeng 77:704–716

    CAS  Google Scholar 

  151. Sauerwald TM, Oyler GA, Betenbaugh MJ (2003) Study of caspase inhibitors for limiting death in mammalian cell culture. Biotechnol Bioeng 81:329–340

    CAS  Google Scholar 

  152. Sauerwald TM, Figueroa B Jr, Hardwick JM, Oyler GA, Betenbaugh MJ (2006) Combining caspase and mitochondrial dysfunction inhibitors of apoptosis to limit cell death in mammalian cell cultures. Biotechnol Bioeng 94:362–372

    CAS  Google Scholar 

  153. Schambach A, Galla M, Maetzig T, Loew R, Baum C (2007) Improving transcriptional termination of self-inactivating gamma-retroviral and lentiviral vectors. Mol Ther 15:1167–1173

    CAS  Google Scholar 

  154. Schatz SM, Kerschbaumer RJ, Gerstenbauer G, Kral M, Dorner F, Scheiflinger F (2003) Higher expression of Fab antibody fragments in a CHO cell line at reduced temperature. Biotechnol Bioeng 84:433–438

    CAS  Google Scholar 

  155. Schroder M (2008) Engineering eukaryotic protein factories. Biotechnol Lett 30:187–196

    Google Scholar 

  156. Schroder M, Kaufman RJ (2005) The mammalian unfolded protein response. Annu Rev Biochem 74:739–789

    Google Scholar 

  157. Schucht R, Coroadinha AS, Zanta-Boussif MA, Verhoeyen E, Carrondo MJ, Hauser H, Wirth D (2006) A new generation of retroviral producer cells: predictable and stable virus production by Flp-mediated site-specific integration of retroviral vectors. Mol Ther 14:285–292

    CAS  Google Scholar 

  158. Schucht R, Wirth D, May T (2009) Precise regulation of transgene expression level and control of cell physiology. Cell Biol Toxicol 26:29–42

    Google Scholar 

  159. Searle PF, Stuart GW, Palmiter RD (1985) Building a metal-responsive promoter with synthetic regulatory elements. Mol Cell Biol 5:1480–1489

    CAS  Google Scholar 

  160. Shaffer AL, Shapiro-Shelef M, Iwakoshi NN, Lee AH, Qian SB, Zhao H, Yu X, Yang L, Tan BK, Rosenwald A, Hurt EM, Petroulakis E, Sonenberg N, Yewdell JW, Calame K, Glimcher LH, Staudt LM (2004) XBP1, downstream of Blimp-1, expands the secretory apparatus and other organelles, and increases protein synthesis in plasma cell differentiation. Immunity 21:81–93

    CAS  Google Scholar 

  161. Sharma N, Moldt B, Dalsgaard T, Jensen TG, Mikkelsen JG (2008) Regulated gene insertion by steroid-induced PhiC31 integrase. Nucleic Acids Res 36:e67

    Google Scholar 

  162. Sibley CR, Seow Y, Wood MJ (2010) Novel RNA-based strategies for therapeutic gene silencing. Mol Ther 18:466–476

    CAS  Google Scholar 

  163. Siddiqui F, Li CY, Larue SM, Poulson JM, Avery PR, Pruitt AF, Zhang X, Ullrich RL, Thrall DE, Dewhirst MW, Hauck ML (2007) A phase I trial of hyperthermia-induced interleukin-12 gene therapy in spontaneously arising feline soft tissue sarcomas. Mol Cancer Ther 6:380–389

    CAS  Google Scholar 

  164. Singh RP, Al-Rubeai M, Gregory CD, Emery AN (1994) Cell death in bioreactors: a role for apoptosis. Biotechnol Bioeng 44:720–726

    CAS  Google Scholar 

  165. Sinn PL, Sauter SL, McCray PB Jr (2005) Gene therapy progress and prospects: development of improved lentiviral and retroviral vectors—design, biosafety, and production. Gene Ther 12:1089–1098

    CAS  Google Scholar 

  166. Sipo I, Hurtado Pico A, Wang X, Eberle J, Petersen I, Weger S, Poller W, Fechner H (2006) An improved Tet-On regulatable FasL-adenovirus vector system for lung cancer therapy. J Mol Med 84:215–225

    CAS  Google Scholar 

  167. Strathdee D, Ibbotson H, Grant SGN (2006) Expression of transgenes targeted to the Gt(ROSA)26Sor locus is orientation dependent. PLoS ONE 1:e4

    Google Scholar 

  168. Sung YH, Hwang SJ, Lee GM (2005) Influence of down-regulation of caspase-3 by siRNAs on sodium-butyrate-induced apoptotic cell death of Chinese hamster ovary cells producing thrombopoietin. Metab Eng 7:457–466

    CAS  Google Scholar 

  169. Sung YH, Lee JS, Park SH, Koo J, Lee GM (2007) Influence of co-down-regulation of caspase-3 and caspase-7 by siRNAs on sodium butyrate-induced apoptotic cell death of Chinese hamster ovary cells producing thrombopoietin. Metab Eng 9:452–464

    CAS  Google Scholar 

  170. Sunley K, Butler M (2010) Strategies for the enhancement of recombinant protein production from mammalian cells by growth arrest. Biotechnol Adv 28:385–394

    Google Scholar 

  171. Sunstrom NA, Gay RD, Wong DC, Kitchen NA, DeBoer L, Gray PP (2000) Insulin-like growth factor-I and transferrin mediate growth and survival of Chinese hamster ovary cells. Biotechnol Prog 16:698–702

    CAS  Google Scholar 

  172. Superti-Furga G, Bergers G, Picard D, Busslinger M (1991) Hormone-dependent transcriptional regulation and cellular transformation by Fos-steroid receptor fusion proteins. Proc Natl Acad Sci U S A 88:5114–5118

    CAS  Google Scholar 

  173. Swinburne IA, Miguez DG, Landgraf D, Silver PA (2008) Intron length increases oscillatory periods of gene expression in animal cells. Genes Dev 22:2342–2346

    CAS  Google Scholar 

  174. Tanaka N, Ishihara M, Kitagawa M, Harada H, Kimura T, Matsuyama T, Lamphier MS, Aizawa S, Mak TW, Taniguchi T (1994) Cellular commitment to oncogene-induced transformation or apoptosis is dependent on the transcription factor IRF-1. Cell 77:829–839

    CAS  Google Scholar 

  175. Tanaka N, Ishihara M, Lamphier MS, Nozawa H, Matsuyama T, Mak TW, Aizawa S, Tokino T, Oren M, Taniguchi T (1996) Cooperation of the tumour suppressors IRF-1 and p53 in response to DNA damage. Nature 382:816–818

    CAS  Google Scholar 

  176. Tascou S, Sorensen TK, Glenat V, Wang M, Lakich MM, Darteil R, Vigne E, Thuillier V (2004) Stringent rosiglitazone-dependent gene switch in muscle cells without effect on myogenic differentiation. Mol Ther 9:637–649

    CAS  Google Scholar 

  177. Tigges M, Marquez-Lago TT, Stelling J, Fussenegger M (2009) A tunable synthetic mammalian oscillator. Nature 457:309–312

    CAS  Google Scholar 

  178. Tigges M, Denervaud N, Greber D, Stelling J, Fussenegger M (2010) A synthetic low-frequency mammalian oscillator. Nucleic Acids Res 38:2702–2711

    CAS  Google Scholar 

  179. Toettcher JE, Mock C, Batchelor E, Loewer A, Lahav G (2010) A synthetic-natural hybrid oscillator in human cells. Proc Natl Acad Sci U S A 107:17047–17052

    CAS  Google Scholar 

  180. Trummer E, Fauland K, Seidinger S, Schriebl K, Lattenmayer C, Kunert R, Vorauer-Uhl K, Weik R, Borth N, Katinger H, Müller D (2006) Process parameter shifting: part II. Biphasic—a tool for enhancing the volumetric productivity of batch processes using Epo-Fc expressing CHO cells. Biotechnol Bioeng 94:1045–1052

    CAS  Google Scholar 

  181. Unsinger J, Kröger A, Hauser H, Wirth D (2001) Retroviral vectors for the transduction of autoregulated, bidirectional expression cassettes. Mol Ther 4:484–489

    CAS  Google Scholar 

  182. Unsinger J, Lindenmaier W, May T, Hauser H, Wirth D (2004) Stable and strictly controlled expression of LTR-flanked autoregulated expression cassettes upon adenoviral transfer. Biochem Biophys Res Commun 319: 879–887

    CAS  Google Scholar 

  183. Urlinger S, Baron U, Thellmann M, Hasan MT, Bujard H, Hillen W (2000) Exploring the sequence space for tetracycline-dependent transcriptional activators: novel mutations yield expanded range and sensitivity. Proc Natl Acad Sci U S A 97:7963–7968

    CAS  Google Scholar 

  184. Urnov FD, Rebar EJ, Holmes MC, Zhang HS, Gregory PD (2010) Genome editing with engineered zinc finger nucleases. Nat Rev Genet 11:636–646

    CAS  Google Scholar 

  185. Vegeto E, Allan GF, Schrader WT, Tsai MJ, McDonnell DP, O’Malley BW (1992) The mechanism of RU486 antagonism is dependent on the conformation of the carboxy-terminal tail of the human progesterone receptor. Cell 69:703–713

    CAS  Google Scholar 

  186. Volpers C, Kochanek S (2004) Adenoviral vectors for gene transfer and therapy. J Gene Med 6:S164–S171

    CAS  Google Scholar 

  187. Wang JD, Shi WL, Zhang GQ, Bai XM (1994) Tissue and serum levels of steroid hormones and RU 486 after administration of mifepristone. Contraception 49:245–253

    CAS  Google Scholar 

  188. Wang GG, Calvo KR, Pasillas MP, Sykes DB, Hacker H, Kamps MP (2006) Quantitative production of macrophages or neutrophils ex vivo using conditional Hoxb8. Nat Methods 3:287–293

    CAS  Google Scholar 

  189. Ward M, Sattler R, Grossman IR, Bell AJ Jr, Skerrett D, Baxi L, Bank A (2003) A stable murine-based RD114 retroviral packaging line efficiently transduces human hematopoietic cells. Mol Ther 8:804–812

    CAS  Google Scholar 

  190. Watanabe S, Shuttleworth J, Al-Rubeai M (2002) Regulation of cell cycle and productivity in NS0 cells by the over-expression of p21CIP1. Biotechnol Bioeng 77:1–7

    CAS  Google Scholar 

  191. Weber W, Fussenegger M (2010) Synthetic gene networks in mammalian cells. Curr Opin Biotechnol 21:690–696

    CAS  Google Scholar 

  192. Weber W, Bacchus W, Daoud-El Baba M, Fussenegger M (2007) Vitamin H-regulated transgene expression in mammalian cells. Nucleic Acids Res 35:e116

    Google Scholar 

  193. Weber W, Marty RR, Link N, Ehrbar M, Keller B, Weber CC, Zisch AH, Heinzen C, Djonov V, Fussenegger M (2003a) Conditional human VEGF-mediated vascularization in chicken embryos using a novel temperature-inducible gene regulation (TIGR) system. Nucleic Acids Res 31:e69

    Google Scholar 

  194. Weber W, Schoenmakers R, Spielmann M, El-Baba MD, Folcher M, Keller B, Weber CC, Link N, van de Wetering P, Heinzen C, Jolivet B, Sequin U, Aubel D, Thompson CJ, Fussenegger M (2003b) Streptomyces-derived quorum-sensing systems engineered for adjustable transgene expression in mammalian cells and mice. Nucleic Acids Res 31:e71

    Google Scholar 

  195. Weber W, Lienhart C, Baba MD, Fussenegger M (2009a) A biotin-triggered genetic switch in mammalian cells and mice. Metab Eng 11:117–124

    CAS  Google Scholar 

  196. Weber W, Schuetz M, Denervaud N, Fussenegger M (2009b) A synthetic metabolite-based mammalian inter-cell signaling system. Mol Biosyst 5:757–763

    CAS  Google Scholar 

  197. Weber W, Luzi S, Karlsson M, Sanchez-Bustamante CD, Frey U, Hierlemann A, Fussenegger M (2009c) A synthetic mammalian electro-genetic transcription circuit. Nucleic Acids Res 37:e33

    Google Scholar 

  198. Wells DJ (2010) Electroporation and ultrasound enhanced non-viral gene delivery in vitro and in vivo. Cell Biol Toxicol 26:21–28

    CAS  Google Scholar 

  199. West AG, Fraser P (2005) Remote control of gene transcription. Hum Mol Genet 14:R101–R111

    CAS  Google Scholar 

  200. Wirth D, Gama-Norton L, Riemer P, Sandhu U, Schucht R, Hauser H (2007) Road to precision: recombinase-based targeting technologies for genome engineering. Curr Opin Biotechnol 18:411–419

    CAS  Google Scholar 

  201. Wong DC, Wong KT, Nissom PM, Heng CK, Yap MG (2006) Targeting early apoptotic genes in batch and fed-batch CHO cell cultures. Biotechnol Bioeng 95:350–361

    CAS  Google Scholar 

  202. Wong SP, Argyros O, Coutelle C, Harbottle RP (2009) Strategies for the episomal modification of cells. Curr Opin Mol Ther 11:433–441

    CAS  Google Scholar 

  203. Wu YI, Frey D, Lungu OI, Jaehrig A, Schlichting I, Kuhlman B, Hahn KM (2009) A genetically encoded photoactivatable Rac controls the motility of living cells. Nature 461:104–108

    CAS  Google Scholar 

  204. Würtele H, Little KCE, Chartrand P (2003) Illegitimate DNA integration in mammalian cells. Gene Ther 10:1791–1799

    Google Scholar 

  205. Yanai N, Suzuki M, Obinata M (1991) Hepatocyte cell lines established from transgenic mice harboring temperature-sensitive simian virus 40 large T-antigen gene. Exp Cell Res 197:50–56

    CAS  Google Scholar 

  206. Yang G, Rosen DG, Mercado-Uribe I, Colacino JA, Mills GB, Bast RC Jr, Zhou C, Liu J (2007) Knockdown of p53 combined with expression of the catalytic subunit of telomerase is sufficient to immortalize primary human ovarian surface epithelial cells. Carcinogenesis 28:174–182

    CAS  Google Scholar 

  207. Yao F, Svensjo T, Winkler T, Lu M, Eriksson C, Eriksson E (1998) Tetracycline repressor, tetR, rather than the tetR-mammalian cell transcription factor fusion derivatives, regulates inducible gene expression in mammalian cells. Hum Gene Ther 9:1939–1950

    CAS  Google Scholar 

  208. Yao G, Lee TJ, Mori S, Nevins JR, You L (2008) A bistable Rb-E2F switch underlies the restriction point. Nat Cell Biol 10:476–482

    CAS  Google Scholar 

  209. Yazawa M, Sadaghiani AM, Hsueh B, Dolmetsch RE (2009) Induction of protein–protein interactions in live cells using light. Nat Biotechnol 27:941–945

    CAS  Google Scholar 

  210. Yoon SK, Kim SH, Lee GM (2003a) Effect of low culture temperature on specific productivity and transcription level of anti-4-1BB antibody in recombinant Chinese hamster ovary cells. Biotechnol Prog 19:1383–1386

    CAS  Google Scholar 

  211. Yoon SK, Song JY, Lee GM (2003b) Effect of low culture temperature on specific productivity, transcription level, and heterogeneity of erythropoietin in Chinese hamster ovary cells. Biotechnol Bioeng 82:289–298

    CAS  Google Scholar 

  212. Yoon SK, Hwang SO, Lee GM (2004) Enhancing effect of low culture temperature on specific antibody productivity of recombinant Chinese hamster ovary cells: clonal variation. Biotechnol Prog 20:1683–1688

    CAS  Google Scholar 

  213. Yoon SK, Hong JK, Choo SH, Song JY, Park HW, Lee GM (2006) Adaptation of Chinese hamster ovary cells to low culture temperature: cell growth and recombinant protein production. J Biotechnol 122:463–472

    CAS  Google Scholar 

  214. Yu SF, von Ruden T, Kantoff PW, Garber C, Seiberg M, Ruther U, Anderson WF, Wagner EF, Gilboa E (1986) Self-inactivating retroviral vectors designed for transfer of whole genes into mammalian cells. Proc Natl Acad Sci U S A 83:3194–3198

    CAS  Google Scholar 

  215. Zhao HF, Boyd J, Jolicoeur N, Shen SH (2003) A coumermycin/novobiocin-regulated gene expression system. Hum Gene Ther 14:1619–1629

    CAS  Google Scholar 

  216. Zhu Z, Ma B, Homer RJ, Zheng T, Elias JA (2001) Use of the tetracycline-controlled transcriptional silencer (tTS) to eliminate transgene leak in inducible overexpression transgenic mice. J Biol Chem 276:25222–25229

    CAS  Google Scholar 

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Botezatu, L., Sievers, S., Gama-Norton, L., Schucht, R., Hauser, H., Wirth, D. (2011). Genetic Aspects of Cell Line Development from a Synthetic Biology Perspective. In: Hu, W., Zeng, AP. (eds) Genomics and Systems Biology of Mammalian Cell Culture. Advances in Biochemical Engineering Biotechnology, vol 127. Springer, Berlin, Heidelberg. https://doi.org/10.1007/10_2011_117

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