Cell Population Tracking and Lineage Construction with Spatiotemporal Context

  • Kang Li
  • Mei Chen
  • Takeo Kanade
Conference paper

DOI: 10.1007/978-3-540-75759-7_36

Part of the Lecture Notes in Computer Science book series (LNCS, volume 4792)
Cite this paper as:
Li K., Chen M., Kanade T. (2007) Cell Population Tracking and Lineage Construction with Spatiotemporal Context. In: Ayache N., Ourselin S., Maeder A. (eds) Medical Image Computing and Computer-Assisted Intervention – MICCAI 2007. MICCAI 2007. Lecture Notes in Computer Science, vol 4792. Springer, Berlin, Heidelberg

Abstract

Automated visual-tracking of cell populations in vitro using phase contrast time-lapse microscopy is vital for quantitative, systematic and high-throughput measurements of cell behaviors. These measurements include the spatiotemporal quantification of migration, mitosis, apoptosis, and cell lineage. This paper presents an automated cell tracking system that can simultaneously track and analyze thousands of cells. The system performs tracking by cycling through frame-by-frame track compilation and spatiotemporal track linking, combining the power of two tracking paradigms. We applied the system to a range of cell populations including adult stem cells. The system achieved tracking accuracies in the range of 83.8%–92.5%, outperforming previous work by up to 8%.

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Copyright information

© Springer-Verlag Berlin Heidelberg 2007

Authors and Affiliations

  • Kang Li
    • 1
  • Mei Chen
    • 2
  • Takeo Kanade
    • 1
  1. 1.Carnegie Mellon University 
  2. 2.Intel Research Pittsburgh 

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