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Soft-Split Sparse Regression Based Random Forest for Predicting Future Clinical Scores of Alzheimer’s Disease

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Book cover Machine Learning in Medical Imaging (MLMI 2015)

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Abstract

In this study, we propose a novel sparse regression based random forest (RF) to predict future clinical scores of Alzheimer’s disease (AD) with the baseline scores and the MRI features. To avoid the stair-like decision boundary caused by axis-aligned split function in the conventional RF, we present a supervised method to construct the oblique split function by using sparse regression to select the informative features and transform the original features into the target-like features that are more discriminative. Then, we construct the oblique splitting function by applying the principal component analysis (PCA) on the transformed target-like features. Furthermore, to reduce the negative impact of potential mis-split induced by the conventional “hard-split”, we further introduce the “soft-split” technique, in which both left and right nodes are visited with certain weights given a test sample. The experiment results show that sparse regression based RF alone can improve the prediction performance of the conventional RF. And further improvement can be achieved when both of the techniques are combined.

This work was supported by the National Institute of Health grants EB006733, EB008374, EB009634, AG041721, MH100217, and AG042599.

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References

  1. Li, J., Jin, Y., Shi, Y., Dinov, I.D., Wang, D.J., Toga, A.W., Thompson, P.M.: Voxelwise spectral diffusional connectivity and its applications to alzheimer’s disease and intelligence Prediction. In: Mori, K., Sakuma, I., Sato, Y., Barillot, C., Navab, N. (eds.) MICCAI 2013, Part I. LNCS, vol. 8149, pp. 655–662. Springer, Heidelberg (2013)

    Google Scholar 

  2. Zhan, L., et al.: Comparison of nine tractography algorithms for detecting abnormal structural brain networks in Alzheimer’s disease. Front. Aging Neurosci. 7, 48 (2015)

    Article  Google Scholar 

  3. Zhan L., et al.: Multiple stages classification of alzheimer’s disease based on structural brain networks using generalized low rank approximations (GLRAM). In: MICCAI Computation Diffusion MRI, Mathematics and Visualization, pp. 35–44 (2014)

    Google Scholar 

  4. Jin Y., et al.: Automated multi-atlas labeling of the fornix and its integrity in Alzheimer’s disease. In: Proc IEEE Int Symp Biomed Imaging, pp. 140–143 (2015)

    Google Scholar 

  5. Petrella, J.R., et al.: Neuroimaging and early diagnosis of Alzheimer disease: a look to the future. Radiology 226(2), 315–336 (2003)

    Article  Google Scholar 

  6. Zhu, X., et al.: Matrix-similarity based loss function and feature selection for Alzheimer’s disease diagnosis. In: IEEE Conf on CVPR, pp. 3089–3096 (2014)

    Google Scholar 

  7. Zhu, X., Suk, H.-I., Shen, D.: A novel multi-relation regularization method for regression and classification in AD diagnosis. In: Golland, P., Hata, N., Barillot, C., Hornegger, J., Howe, R. (eds.) MICCAI 2014, Part III. LNCS, vol. 8675, pp. 401–408. Springer, Heidelberg (2014)

    Chapter  Google Scholar 

  8. Breiman, L.: Random forests. Machine learning 45(1), 5–32 (2001)

    Article  Google Scholar 

  9. Menze, B.H., Kelm, B., Splitthoff, D.N., Koethe, U., Hamprecht, F.A.: On oblique random forests. In: Gunopulos, D., Hofmann, T., Malerba, D., Vazirgiannis, M. (eds.) ECML PKDD 2011, Part II. LNCS, vol. 6912, pp. 453–469. Springer, Heidelberg (2011)

    Chapter  Google Scholar 

  10. Tzourio-Mazoyer, N., et al.: Automated anatomical labeling of activations in SPM using a macroscopic anatomical parcellation of the MNI MRI single-subject brain. Neuroimage 15(1), 273–289 (2002)

    Article  Google Scholar 

  11. Duchesne, S., et al.: Relating one-year cognitive change in mild cognitive impairment to baseline MRI features. Neuroimage 47(4), 1363–1370 (2009)

    Article  Google Scholar 

  12. Stonnington, C.M., et al.: Predicting clinical scores from magnetic resonance scans in Alzheimer’s disease. Neuroimage 51(4), 1405–1413 (2010)

    Article  Google Scholar 

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Correspondence to Lei Huang or Yan Jin .

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Huang, L., Gao, Y., Jin, Y., Thung, KH., Shen, D. (2015). Soft-Split Sparse Regression Based Random Forest for Predicting Future Clinical Scores of Alzheimer’s Disease. In: Zhou, L., Wang, L., Wang, Q., Shi, Y. (eds) Machine Learning in Medical Imaging. MLMI 2015. Lecture Notes in Computer Science(), vol 9352. Springer, Cham. https://doi.org/10.1007/978-3-319-24888-2_30

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  • DOI: https://doi.org/10.1007/978-3-319-24888-2_30

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  • Publisher Name: Springer, Cham

  • Print ISBN: 978-3-319-24887-5

  • Online ISBN: 978-3-319-24888-2

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