Abstract
Savannas can be found in North and South America, Africa, Asia, and Oceania. The Cerrado is a vast savanna located mainly in the central region of Brazil. Although, Cerrado ecosystems are similar in vegetation structure, differences in soil characteristics influence the microbiota. Throughout the world savannas are rapidly being converted to agricultural and urban uses, altering physical and chemical properties of the soil, as well as microbial diversity through changes in bacterial and fungal richness, community structure, and activity. The studies addressed in this review describe soil microbial communities present in Cerrado ecosystems, which are dominated by Acidobacteria, Proteobacteria, and Actinobacteria. We highlight the importance of microbial communities to ecosystem services such as nutrient cycling, regulation of biogeochemical processes, and contribution to net primary production. Sustainable development based on the use of natural resources requires a better understanding of the microbial processes and genetic resources in this biome.
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Albuquerque deBaroos EV, Manfio GP, Ribiero Maitan V, Mendes Bataus LA, Kim SB, Maldonado LA, Goodfellow M (2003) Nocardia cerradoensis sp. nov., a novel isolate from Cerrado soil in Brazil. Int J Syst Evol Microbiol 53:29–33
Allison SD, Martiny JBH (2008) Resistance, resilience, and redundancy in microbial communities. Proc Natl Acad Sci U S A 105:11512–11519
Andrén O, Kirchmann H, Kätterer T, Magid J, Paul EA, Coleman DC (2008) Visions of a more precise soil biology. Eur J Soil Sci 59:380–390
Araujo JF, de Castro AP, Costa MM, Togawa RC, Junior GJ, Quirino BF, Bustamante MM, Williamson L, Handelsman J, Kruger RH (2012) Characterization of soil bacterial assemblies in Brazilian savanna-like vegetation reveals acidobacteria dominance. Microb Ecol 64:760–770
Bapteste E, Dupré J (2013) Towards a processual microbial ontology. Biol Philos 28:379–404
Bell T, Newman JA, Silverman BW, Turner SL, Lilley AK (2005) The contribution of species richness and composition to bacterial services. Nature 436:1157–1160
Bresolin JD, Bustamante MM, Kruger RH, Silva MR, Perez KS (2010) Structure and composition of bacterial and fungal community in soil under soybean monoculture in the Brazilian Cerrado. Braz J Microbiol 41:391–403
Carvalho JLN, Cerri CEP, Cerri CC, Feigl BJ, Píccolo MC, Godinho VP, Herpin U (2007) Changes of chemical properties in an oxisol after clearing of native Cerrado vegetation for agricultural use in Vilhena, Rondonia State, Brazil. Soil Tillage Res 96:95–102
Carvalho FMV, De Marco P, Ferreira LG (2009) The Cerrado into-pieces: Habitat fragmentation as a function of landscape use in the savannas of central Brazil. Biol Conserv 142:1392–1403
Castro-Neves BM, Miranda HS (1996) Efeitos do fogo no regime térmico do solo de um campo sujo de cerrado. In: Miranda HS, Saito CH, Dias BFS (eds) Impactos de queimadas em áreas de Cerrado e Restinga. ECL/UnB, Brasília, Brazil, pp 20–30
CRS/IBAMA (2011) Relatório técnico de monitoramento do desmatamento no bioma Cerrado, 2009–2010. Acordo de cooperação técnica MMA/IBAMA/PNUD, pp 65
de Castro VHL (2012) Identificação, isolamento e caracterização de bactérias do solo de Cerrado pertencentes ao filo Acidobacteria. Universidade Católica de Brasília, Brasília
de Castro AP, Quirino BF, Pappas G, Kurokawa AS, Neto EL, Kruger RH (2008) Diversity of soil fungal communities of Cerrado and its closely surrounding agriculture fields. Arch Microbiol 190:129–139
de Castro AP, Quirino BF, Allen H, Williamson LL, Handelsman J, Kruger RH (2011) Construction and validation of two metagenomic DNA libraries from Cerrado soil with high clay content. Biotechnol Lett 33:2169–2175
da Silva MRSS (2004) Produção de serrapilheira, biomassa e diversidade de comunidades bacterianas do solo em áreas de Cerrado sob diferentes usos e manejos. Universidade de Brasília, Brasília
da Silva MRSS (2012) Diversidade de comunidades bacterianas de solo de Cerrado em resposta a diferentes alterações dos ecossistemas. Universidade de Brasília, Brasília
Ducklow H (2008) Microbial services: challenges for microbial ecologists in a changing world. Aquat Microb Ecol 53:13–19
Eiten G (1972) The Cerrado vegetation of Brazil. Bot Rev 38:201–341
Ferreira AS, Dos Santos MA, Correa GF (2013) Soil microbial response to glucose and phosphorus addition under agricultural systems in the Brazilian Cerrado. An Acad Bras Cienc 85:395–403
Fierer N, Bradford MA, Jackson RB (2007) Toward an ecological classification of soil bacteria. Ecology 88:1354–1364
Frazão LA, Piccolo MdC, Feigl BJ, Cerri CC, Cerri CEP (2010) Inorganic nitrogen, microbial biomass and microbial activity of a sandy Brazilian Cerrado soil under different land uses. Agric Ecosyst Environ 135:161–167
Frost P, Medina E, Menaut J-C, Solbrig O, Swift M, Walker B (1986) Responses of savannas to stress and disturbance: a proposal for a collaborative programme of research: report of a Meeting of an IUBS Working Group on Decade of the Tropics Programme/Tropical Savanna Ecosystems: International Union of Biological Sciences, News Magazine, Harare, Zimbabwe
Furley PA (1999) The nature and diversity of neotropical savanna vegetation with particular reference to the Brazilian Cerrados. Global Ecol Biogeogr 8:223–241
Ganz HH, Karaoz U, Getz WM, Versfeld W, Brodie EL (2012) Diversity and structure of soil bacterial communities associated with vultures in an African savanna. Ecosphere 3(6):47
Giambelluca TW, Scholz FG, Bucci SJ, Meinzer FC, Goldstein G, Hoffmann WA, Franco AC, Buchert MP (2009) Evapotranspiration and energy balance of Brazilian savannas with contrasting tree density. Agric Entomol 149:1365–1376
Goedert WT, Wagner E, Barcellos AO (2008) Savanas tropicais: dimensão, histórico e perspectivas. FG Faleiro; AL Farias Neto. Savanas: desafios e estratégias para o equilíbrio entre sociedade, agronegócio e recursos naturais. Planaltina: Embrapa Cerrados Cap 1:49–77
Gomes RC, Semedo LT, Soares RM, Alviano CS, Linhares LF, Coelho RR (2000) Chitinolytic activity of actinomycetes from a Cerrado soil and their potential in biocontrol. Lett Appl Microbiol 30:146–150
Green JL, Bohannan BJ, Whitaker RJ (2008) Microbial biogeography: from taxonomy to traits. Science 320:1039–1043
Gremion F, Chatzinotas A, Harms H (2003) Comparative 16S rDNA and 16S rRNA sequence analysis indicates that actinobacteria might be a dominant part of the metabolically active bacteria in heavy metal-contaminated bulk and rhizosphere soil. Environ Microbiol 5:896–907
Griffiths BS, Kuan HL, Ritz K, Glover LA, McCaig AE, Fenwick C (2004) The relationship between microbial community structure and functional stability, tested experimentally in an upland pasture soil. Microb Ecol 47:104–113
Hammer Ø, Ryan P, Harper D (2001) PAST: paleontological statistics software package for education and data analysis. Palaeontol Electron 4(1):1–9
Horner-Devine MC, Lage M, Hughes JB, Bohannan BJM (2004) A taxa-area relationship for bacteria. Nature 432:750–753
Horwarth WR (2002) Biomass: soil microbial biomass. In: Bitton G (ed) Encyclopedia of environmental microbiology. Wiley-Interscience, New York pp 3551
Jeltsch F, Tietjen B, Blaum N, Rossmanith E (2010) Population and ecosystem modeling of land use and climate change impacts on arid and semiarid savanna dynamics. In: Hill MJ, Hanan NP (eds) Ecosystem function in savannas: measurement and modeling at landscape to global scales. CRC Press, Boca Raton, pp 623
Lauber CL, Hamady M, Knight R, Fierer N (2009) Pyrosequencing-based assessment of soil pH as a predictor of soil bacterial community structure at the continental scale. Appl Environ Microbiol 75:5111–5120
LeBlanc JC, Goncalves ER, Mohn WW (2008) Global response to desiccation stress in the soil actinomycete Rhodococcus jostii RHA1. Appl Environ Microbiol 74:2627–2636
Lira GTR (2012) Diversidade em comunidades bacterianas de solos de matas de galeria do Cerrado. Universidade de Brasília, Brasília
Lopes AS (1996) Soils under Cerrado: a success story in soil management. Better Crops Int 10:9–15
Lopes CT, Vasconcelos HL (2011) Fire increases insect herbivory in a neotropical Savanna. Biotropica 43:612–618
Marris E (2005) Conservation in Brazil: the forgotten ecosystem. Nature 437:944–945
Martiny JB, Bohannan BJ, Brown JH, Colwell RK, Fuhrman JA, Green JL, Horner-Devine MC, Kane M, Krumins JA, Kuske CR, Morin PJ, Naeem S, Ovreas L, Reysenbach AL, Smith VH, Staley JT (2006) Microbial biogeography: putting microorganisms on the map. Nat Rev Microbiol 4:102–112
Martiny AC, Treseder K, Pusch G (2013) Phylogenetic conservatism of functional traits in microorganisms. ISME J 7:830–838
McPherson GR (1997) Ecology and management of North American Savannas. The University of Arizona Press, Arizona
Medina E, Silva JF (1990) Savannas of Northern South America: a steady state regulated by water-fire interactions on a background of low nutrient availability. J Biogeogr 17:403–413
Mendes IC, Fernandes MF, Chaer GM, dos Reis FB Jr (2012) Biological functioning of Brazilian Cerrado soils under different vegetation types. Plant Soil 359:183–195
Miranda AC, Miranda HS, Dias IFO, Dias BFS (1993) Soil and air temperatures during prescribed Cerrado fires in Central Brazil. J Trop Ecol 9:313–320
Miranda HS, Rocha eSEP, Miranda AC (1996) Comportamento do fogo em queimadas de campo sujo. In: Miranda HS, Saito CH, Dias BFS (eds) Impactos de queimadas em áreas de Cerrado e Restinga. ECL/UnB, Brasília, Brazil, pp 1–10
Mistry J (2000) World Savannas. Prentice Hall, London
Myers N, Mittermeier RA, Mittermeier CG, da Fonseca GA, Kent J (2000) Biodiversity hotspots for conservation priorities. Nature 403:853–858
Nardoto GB, Bustamante MMD (2003) Effects of fire on soil nitrogen dynamics and microbial biomass in savannas of Central Brazil. Pesqui Agropecu Bras 38:955–962
Nascimento RP, d’Avila-Levy CM, Souza RF, Branquinha MH, Bon EPS, Pereira N Jr, Coehlo RRR (2005) Production and partial characterization of extracellular proteinases from Streptomyces malaysiensis, isolated from a Brazilian Cerrado soil. Arch Microbiol 184:194–198
Nemergut DR, Cleveland CC, Wieder WR, Washenberger CL, Townsend AR (2010) Plot-scale manipulations of organic matter inputs to soils correlate with shifts in microbial community composition in a lowland tropical rain forest. Soil Biol Biochem 42:2153–2160
Nielsen UN, Osler GHR, Campbell CD, Burslem DFRP, van der Wal R (2010) The influence of vegetation type, soil properties and precipitation on the composition of soil mite and microbial communities at the landscape scale. J Biogeogr 37:1317–1328
Peixoto RS, Coutinho HLC, Madari B, Machado PLOA, Rumjanek NG, van Elsas JD, Seldin J, Rosado AS (2006) Soil aggregation and bacterial community structure as affected by tillage and cover cropping in the Brazilian Cerrados. Soil Tillage Res 90:16–28
Peixoto RS, Chaer GM, Franco N, Reis FB Jr, Mendes IC, Rosado AS (2010) A decade of land use contributes to changes in the chemistry, biochemistry and bacterial community structures of soils in the Cerrado. Antonie Van Leeuwenhoek 98:403–413
Petinate SD, Branquinha MH, Coelho RR, Vermelho AB, Giovanni-De-Simone S (1997) Purification and partial characterization of an extracellular serine-proteinase of Streptomyces cyaneus isolated from Brazilian Cerrado soil. J Appl Microbiol 87:557–563
Pinto AS, Bustamante MMC, da Silva MRSS, Kisselle KW, Brossard M, Kruger RH, Zepp RG, Burke RA (2006) Effects of different treatments of pasture restoration on soil trace gas emissions in the Cerrados of Central Brazil. Earth Interact 10:1–26
Pivello VR (2011) Invasões Biológicas no Cerrado Brasileiro: Efeitos da Introdução de Espécies Exóticas sobre a Biodiversidade. Ecologia.info 33
Pivello VR, Carvalho VMC, Lopes PF, Peccinini AA, Rosso S (1999a) Abundance and distribution of native and alien grasses in a “Cerrado” (Brazilian Savanna) biological reserve1. Biotropica 31:71–82
Pivello VR, Shida CN, Meirelles ST (1999b) Alien grasses in Brazilian savannas: a threat to the biodiversity. Biodivers Conserv 8:1281–1294
Quirino BF, Pappas GJ, Tagliaferro AC, Collevatti RG, Neto EL, da Silva MR, Bustamante MM, Kruger RH (2009) Molecular phylogenetic diversity of bacteria associated with soil of the savanna-like Cerrado vegetation. Microbiol Res 164:59–70
R Core Team (2013) R: a language and environment for statistical computing. R Foundation for Statistical Computing, Vienna
Rachid CTCC, Santos AL, Piccolo MC, Balieiro FC, Coutinho HLC, Peixoto RS, Tiedje JM, Rosado AS (2013) Effect of sugarcane burning or green harvest methods on the Brazilian Cerrado soil bacterial community structure. PLoS ONE 8(3):e59342
Rampelotto PH, de Siqueira FA, Barboza AD, Roesch LF (2013) Changes in diversity, abundance, and structure of soil bacterial communities in Brazilian Savanna under different land use systems. Microb Ecol 66:593–607
Reatto A, Correia JR, Spera ST (1998) Solos do bioma Cerrado: aspectos pedológicos. In: de Almeida SP (ed) Cerrado: ambiente e flora. EMBRAPA, Planaltina, pp 47–86
Resende JC (2001) A ciclagem de nutrientes em áreas de cerrado e a influência de queimadas controladas. Universidade de Brasília, Brasília
Ribeiro JF, Walter BMT (1998) Fitofisionomias do bioma do Cerrado: os biomas do Brasil. In: de Almeida SP (ed) Cerrado: ambiente e flora. EMBRAPA, Planaltina, pp 8–166
Roesch LF, Fulthorpe RR, Riva A, Casella G, Hadwin AK, Kent AD, Daroub SH, Camargo FA, Farmerie WG, Triplett EW (2007) Pyrosequencing enumerates and contrasts soil microbial diversity. ISME J 1:283–290
Romero-Ruiz M, Etter A, Sarmiento A, Tansey K (2010) Spatial and temporal variability of fires in relation to ecosystems, land tenure and rainfall in savannas of northern South America. Global Change Biol 16(7):2013–2023
Romero-Ruiz MH, Flantua SGA, Tansey K, Berrio JC (2012) Landscape transformations in savannas of northern South America: land use/cover changes since 1987 in the Llanos Orientales of Colombia. Appl Geogr 32:766–776
Rossi CQ, Pereira MG, Loss A, Gazolla PR, Perin A, dos Anjos LHC (2013) Changes in soil C and N distribution assessed by natural δ13 C and δ15 N abundance in a chronosequence of sugarcane crops managed with pre-harvest burning in a Cerrado area of Goiás, Brazil. Agric Ecosyst Environ 170:36–44
Sankaran M, Ratnam J, Hanan NP (2004) Tree-grass coexistence in savannas revisited - insights from an examination of assumptions and mechanisms invoked in existing models. Ecol Lett 7(6):480–490
Sano EE, Rosa R, Brito JL, Ferreira LG (2010) Land cover mapping of the tropical savanna region in Brazil. Environ Monit Assess 166:113–124
Scholes RJ, Archer SR (1997) Tree-grass interactions in savannas. Annu Rev Ecol Syst 28:517–544
Schüle W (1990) Landscape and climate in prehistory: interactions of wildlife, man, and fire. In: Goldammer JG (ed) Fire in the tropical biota, vol 84. Springer, Berlin, pp 273–318
Souza RC, Cantão ME, Vasconcelos ATR, Nogueira MA, Hungria M (2013) Soil metagenomics reveals differences under conventional and no-tillage with crop rotation or succession. Appl Soil Ecol 72:49–61
Tripathi B, Kim M, Singh D, Lee-Cruz L, Lai-Hoe A, Ainuddin AN, Go R, Rahim R, Husni MHA, Chun J, Adams J (2012) Tropical soil bacterial communities in Malaysia: pH dominates in the equatorial tropics too. Microb Ecol 64:474–484
van der Heijden MGA, Bardgett RD, Van Straalen NM (2008) The unseen majority: soil microbes as drivers of plant diversity and productivity in terrestrial ecosystems. Ecol Lett 11:296–310
Viana LT (2002) Comparação das dinâmicas de mineralização de nitrogênio, biomassa e estrutura das comunidades microbianas do solo em áreas de cerrado nativo e pastagem. Universidade de Brasília, Brasília
Viana LT, Bustamante MMD, Molina M, Pinto AD, Kisselle K, Zepp R, Burke RA (2011) Microbial communities in Cerrado soils under native vegetation subjected to prescribed fire and under pasture. Pesqui Agropecu Bras 46:1665–1672
Vinhal-Freitas IC, Ferreira AS, Corrêa GF, Wendling B (2013) Land use impact on microbial and biochemical indicators in agroecosystems of the Brazilian Cerrado. Vadose Zone J 12(1):1–8
Wells CG, Campbell RE, Debano LF, Lewis CE, Fredricksen RL, Franklin EC, Froelich RC, Dunn PH (1979) Effects of fire on soil: a state-of-knowledge review. USDA forest service general technical report WO-7, Washington, DC
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Catão, E., Lopes, F., da Silva, M., Santana, R., Bustamante, M., Krüger, R. (2014). Diversity and Function of Bacterial Assemblages in Savanna Vegetation Soils. In: Maheshwari, D. (eds) Bacterial Diversity in Sustainable Agriculture. Sustainable Development and Biodiversity, vol 1. Springer, Cham. https://doi.org/10.1007/978-3-319-05936-5_6
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