Computational Methods in Systems Biology

10th International Conference, CMSB 2012, London, UK, October 3-5, 2012. Proceedings

Editors:

ISBN: 978-3-642-33635-5 (Print) 978-3-642-33636-2 (Online)

Table of contents (28 chapters)

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  1. Front Matter

    Pages -

  2. Invited Talks

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      Book Chapter

      Pages 1-1

      Differential and Integral Views of Gene-Phenotype Relations: A Systems Biological Insight

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      Book Chapter

      Pages 2-16

      Resolving the Three-Dimensional Histology of the Heart

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      Pages 17-28

      Bimodal Protein Distributions in Heterogeneous Oscillating Systems

  3. Regular Papers

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      Book Chapter

      Pages 29-48

      Expressive Statistical Model Checking of Genetic Networks with Delayed Stochastic Dynamics

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      Book Chapter

      Pages 49-68

      Symmetry-Based Model Reduction for Approximate Stochastic Analysis

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      Pages 69-86

      Detection of Multi-clustered Genes and Community Structure for the Plant Pathogenic Fungus Fusarium graminearum

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      Pages 87-106

      Predicting Phenotype from Genotype through Automatically Composed Petri Nets

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      Pages 107-126

      A Simple Model to Control Growth Rate of Synthetic E. coli during the Exponential Phase: Model Analysis and Parameter Estimation

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      Book Chapter

      Pages 127-147

      Multi-objective Optimisation, Sensitivity and Robustness Analysis in FBA Modelling

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      Pages 148-165

      Analysis of Modular Organisation of Interaction Networks Based on Asymptotic Dynamics

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      Pages 166-186

      Concretizing the Process Hitting into Biological Regulatory Networks

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      Pages 187-206

      Abstraction of Graph-Based Models of Bio-molecular Reaction Systems for Efficient Simulation

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      Pages 207-226

      Parameter Identification and Model Ranking of Thomas Networks

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      Pages 227-246

      Investigating Co-infection Dynamics through Evolution of Bio-PEPA Model Parameters: A Combined Process Algebra and Evolutionary Computing Approach

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      Book Chapter

      Pages 247-266

      Population Dynamics P Systems on CUDA

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      Book Chapter

      Pages 267-287

      Approximate Bisimulations for Sodium Channel Dynamics

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      Book Chapter

      Pages 288-306

      Efficient Handling of Large Signalling-Regulatory Networks by Focusing on Their Core Control

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      Book Chapter

      Pages 307-321

      Sequence Dependent Properties of the Expression Dynamics of Genes and Gene Networks

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      Book Chapter

      Pages 322-341

      Simulating Insulin Infusion Pump Risks by In-Silico Modeling of the Insulin-Glucose Regulatory System

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      Book Chapter

      Pages 342-361

      Revisiting the Training of Logic Models of Protein Signaling Networks with ASP

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