Advances in Bioinformatics and Computational Biology

7th Brazilian Symposium on Bioinformatics, BSB 2012, Campo Grande, Brazil, August 15-17, 2012. Proceedings

Editors:

ISBN: 978-3-642-31926-6 (Print) 978-3-642-31927-3 (Online)

Table of contents (17 chapters)

  1. Front Matter

    Pages -

  2. No Access

    Book Chapter

    Pages 1-12

    Transposition Diameter and Lonely Permutations

  3. No Access

    Book Chapter

    Pages 13-24

    Extending the Algebraic Formalism for Genome Rearrangements to Include Linear Chromosomes

  4. No Access

    Book Chapter

    Pages 25-36

    On the Approximation Ratio of Algorithms for Sorting by Transpositions without Using Cycle Graphs

  5. No Access

    Book Chapter

    Pages 37-48

    A Comparison of Three Heuristic Methods for Solving the Parsing Problem for Tandem Repeats

  6. No Access

    Book Chapter

    Pages 49-60

    RNA Folding Algorithms with G-Quadruplexes

  7. No Access

    Book Chapter

    Pages 61-72

    Molecular Dynamics for Simulating the Protein Folding Process Using the 3D AB Off-Lattice Model

  8. No Access

    Book Chapter

    Pages 73-83

    A Bioconductor Based Workflow for Z-DNA Region Detection and Biological Inference

  9. No Access

    Book Chapter

    Pages 84-96

    A Probabilistic Model Checking Approach to Investigate the Palytoxin Effects on the Na + /K + -ATPase

  10. No Access

    Book Chapter

    Pages 97-108

    RFMirTarget: A Random Forest Classifier for Human miRNA Target Gene Prediction

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    Book Chapter

    Pages 109-119

    Prediction of Transcription Factor Binding Sites by Integrating DNase Digestion and Histone Modification

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    Book Chapter

    Pages 120-131

    Evaluating Correlation Coefficients for Clustering Gene Expression Profiles of Cancer

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    Book Chapter

    Pages 132-143

    Associating Genotype Sequence Properties to Haplotype Inference Errors

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    Book Chapter

    Pages 144-155

    Design and Implementation of ProteinWorldDB

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    Book Chapter

    Pages 156-167

    A Comparative Analysis of Public Ligand Databases Based on Molecular Descriptors

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    Book Chapter

    Pages 168-178

    Phylogenetic Distance Computation Using CUDA

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    Book Chapter

    Pages 179-191

    Exploring Molecular Evolution Reconstruction Using a Parallel Cloud Based Scientific Workflow

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    Book Chapter

    Pages 192-201

    How Bioinformatics Enables Livestock Applied Sciences in the Genomic Era

  19. Back Matter

    Pages -