Bioinformatics Research and Applications

7th International Symposium, ISBRA 2011, Changsha, China, May 27-29, 2011. Proceedings

Editors:

ISBN: 978-3-642-21259-8 (Print) 978-3-642-21260-4 (Online)

Table of contents (41 chapters)

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  1. Front Matter

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    Pages 1-1

    Phylogenetics of Heterogeneous Samples

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    Pages 2-3

    OMG! Orthologs for Multiple Genomes - Competing Formulations

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    Pages 4-7

    Phylogenetic Analysis of Whole Genomes

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    Pages 8-10

    Genetic and Pharmacogenetic Studies of Neuropsychiatric Disorders: Increasingly Critical Roles of Bioinformatics Research and Applications

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    Pages 11-11

    Genome-Phenome Association Analysis of Complex Diseases a Structured Sparse Regression Approach

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    Pages 12-24

    Prediction of Essential Proteins by Integration of PPI Network Topology and Protein Complexes Information

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    Pages 25-36

    Computing the Protein Binding Sites

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    Pages 37-48

    SETTER - RNA SEcondary sTructure-based TERtiary Structure Similarity Algorithm

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    Pages 49-60

    Prediction of Essential Genes by Mining Gene Ontology Semantics

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    Pages 61-72

    High-Performance Blob-Based Iterative Reconstruction of Electron Tomography on Multi-GPUs

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    Pages 73-86

    Component-Based Matching for Multiple Interacting RNA Sequences

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    Pages 87-98

    A New Method for Identifying Essential Proteins Based on Edge Clustering Coefficient

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    Pages 99-110

    Gene Order in Rosid Phylogeny, Inferred from Pairwise Syntenies among Extant Genomes

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    Pages 111-122

    Algorithms to Detect Multiprotein Modularity Conserved during Evolution

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    Pages 123-135

    The Kernel of Maximum Agreement Subtrees

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    Pages 136-147

    A Consensus Approach to Predicting Protein Contact Map via Logistic Regression

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    Pages 148-159

    A Linear Time Algorithm for Error-Corrected Reconciliation of Unrooted Gene Trees

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    Pages 160-171

    Comprehensive Pharmacogenomic Pathway Screening by Data Assimilation

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    Pages 172-183

    The Deep Coalescence Consensus Tree Problem is Pareto on Clusters

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    Pages 184-196

    Fast Local Search for Unrooted Robinson-Foulds Supertrees

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