2011

Weighted Network Analysis

Applications in Genomics and Systems Biology

Authors:

ISBN: 978-1-4419-8818-8 (Print) 978-1-4419-8819-5 (Online)

Table of contents (15 chapters)

  1. Front Matter

    Pages i-xxiii

  2. No Access

    Book Chapter

    Pages 1-34

    Networks and Fundamental Concepts

  3. No Access

    Book Chapter

    Pages 35-43

    Approximately Factorizable Networks

  4. No Access

    Book Chapter

    Pages 45-75

    Different Types of Network Concepts

  5. No Access

    Book Chapter

    Pages 77-89

    Adjacency Functions and Their Topological Effects

  6. No Access

    Book Chapter

    Pages 91-121

    Correlation and Gene Co-Expression Networks

  7. No Access

    Book Chapter

    Pages 123-160

    Geometric Interpretation of Correlation Networks Using the Singular Value Decomposition

  8. No Access

    Book Chapter

    Pages 161-178

    Constructing Networks from Matrices

  9. No Access

    Book Chapter

    Pages 179-206

    Clustering Procedures and Module Detection

  10. No Access

    Book Chapter

    Pages 207-247

    Evaluating Whether a Module is Preserved in Another Network

  11. No Access

    Book Chapter

    Pages 249-277

    Association Measures and Statistical Significance Measures

  12. No Access

    Book Chapter

    Pages 279-320

    Structural Equation Models and Directed Networks

  13. No Access

    Book Chapter

    Pages 321-351

    Integrated Weighted Correlation Network Analysis of Mouse Liver Gene Expression Data

  14. No Access

    Book Chapter

    Pages 353-372

    Networks Based on Regression Models and Prediction Methods

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    Book Chapter

    Pages 373-400

    Networks Between Categorical or Discretized Numeric Variables

  16. No Access

    Book Chapter

    Pages 401-411

    Network Based on the Joint Probability Distribution of Random Variables

  17. Back Matter

    Pages 413-421