2011

Problem Solving Handbook in Computational Biology and Bioinformatics

Editors:

ISBN: 978-0-387-09759-6 (Print) 978-0-387-09760-2 (Online)

Table of contents (15 chapters)

  1. Front Matter

    Pages i-xvii

  2. Sequences

    1. Front Matter

      Pages 1-2

    2. No Access

      Book Chapter

      Pages 3-19

      Modern BLAST Programs

    3. No Access

      Book Chapter

      Pages 21-43

      Practical Multiple Sequence Alignment

    4. No Access

      Book Chapter

      Pages 45-60

      Sequence Alignment Statistics

  3. Phylogenetics

    1. Front Matter

      Pages 61-62

    2. No Access

      Book Chapter

      Pages 63-84

      Practical Implications of Coalescent Theory

    3. No Access

      Book Chapter

      Pages 85-100

      Graph Model of Coalescence with Recombinations

    4. No Access

      Book Chapter

      Pages 101-124

      Phylogenetic Trees From Sequences

    5. No Access

      Book Chapter

      Pages 125-158

      Evolutionary Phylogenetic Networks: Models and Issues

    6. No Access

      Book Chapter

      Pages 159-175

      Genome Wide Association Studies

  4. Proteins: Structure, Function, and Biochemistry

    1. Front Matter

      Pages 177-178

    2. No Access

      Book Chapter

      Pages 179-207

      Novel Perspectives on Protein Structure Prediction

    3. No Access

      Book Chapter

      Pages 209-230

      Stochastic Simulation for Biochemical Systems

  5. Networks

    1. Front Matter

      Pages 231-232

    2. No Access

      Book Chapter

      Pages 233-252

      Cellular Response Networks

    3. No Access

      Book Chapter

      Pages 253-267

      Identification of Modules in Protein-Protein Interaction Networks

  6. Biological Data Management and Mining

    1. Front Matter

      Pages 269-270

    2. No Access

      Book Chapter

      Pages 271-290

      Designing Microarray Experiments

    3. No Access

      Book Chapter

      Pages 291-318

      Matrix and Tensor Decompositions

    4. No Access

      Book Chapter

      Pages 319-339

      Practical Applications of the Gene Ontology Resource

  7. Back Matter

    Pages 341-347