Abstract
The informativity of some regions of the ribosomal cluster (rDNA) in freshwater horsehair worms (Nematomorpha) has been analyzed to trace the nucleotide differences for discrimination of species and genera of these parasites using available sequences from the NCBI GenBank and our data.
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Aguinaldo, A.M., Turbeville, J.M., Linford, L.S., Rivera, M.C., Garey, J.R., Raff, R.A., and Lake, J.A., Evidence for a clade of nematodes, arthropods and other moulting animals, Nature, 1997, vol. 387, pp. 489–493.
Bolek, M., Schmidt-Rhaesa, A., Hanelt, B., and Richardson, D., Redescription of the African Chordodes albibarbatus Montgomery 1898, and description of Chordodes janovyi n. sp. (Gordiida, Nematomorpha) and its non-adult stages from Cameroon, Africa, Zootaxa, 2010, vol. 2631, pp. 36–50.
Giribet, G., Carrunza, S., Baguna, J., Riutort, M., and Ribera, C., First molecular evidence for the existence of a Tardigrada + Arthropoda clade, Mol. Biol. Evol., 1996, vol. 13, pp. 76–84.
Heinze, K., Saitenwürmer Oder Gordioidea (Nematomorpha), in Die Tierwelt Deutschlands, Dahl, F., Ed., Jena: Gustav Fischer, 1941, vol. 39, pp. 1–78.
Hillis, D.M. and Dixon, M.T., Ribosomal DNA—molecular evolution and phylogenetic inference, Q. Rev. Biol., 1991, vol. 66, pp. 410–453.
Holterman, M., van der Wurff, A., van den Elsen, S., van Megen, H., Bongers, T., Holovachov, O., Bakker, J., and Helder, J., Phylum-wide analysis of SSU rDNA reveals deep phylogenetic relationships among nematodes and accelerated evolution toward crown clades, Mol. Biol. Evol., 2006, pp. 1792–1800.
Huelsenbeck, J.P. and Ronquist, F., MRBAYES: Bayesian inference of phylogeny, Bioinformatics, 2001, vol. 17, pp. 754–755.
Lanave, C., Preparata, G., Saccone, C., and Serio, G., A new method for calculating evolutionary substitution rates, J. Mol. Evol., 1984, vol. 20, pp. 86–93.
May, H.G., Contributions to the life histories of Gordius robustus Leidy and Paragordius varius (Leidy), Illinois Biol. Monogr., 1919, vol. 5, pp. 1–119.
Nicholas, K.B., Nicholas, H.B., and Deerfield, D.W., GeneDoc: analysis and visualization of genetic variation, EMBNEW News, 1997, vol. 4, p. 14.
Philippe, H., Sorhannus, U., Baroin, A., Perasso, R., Gasse, F., and Adoutte, A., Comparison of molecular and paleontological data in diatoms suggests a major gap in the fossil record, J. Evol. Biol., 1994, vol. 7, pp. 247–265.
Rauther, M., Nemathelminthes, in Handbuck der Zoologie, Kukenthal, W. and Krumbach, T., Eds., Berlin: W. de Gruyter, 1930, Bd 2, S. 249–402.
Schmidt-Rhaesa, A., Are the genera of Nematomorpha monophyletic taxa?, Zool. Scripta, 2002, vol. 31, pp. 185–200.
Spiridonov, S.E. and Schmatko, V.Yu., Morphological and molecular characterization of Gordionus alpestris (Nematomorpha) from the North-West Caucasus, Russia, Helminthologia, 2013, vol. 50, no. 1, pp. 67–72.
Tamura, K., Peterson, D., Peterson, N., Stecher, G., Nei, M., and Kumar, S., MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods, Mol. Biol. Evol., 2011, vol. 28, pp. 2731–2739.
Telford, M.J., Bourlat, S.J., Economou, A., Papillon, D., and Rota-Stabelli, O., The evolution of the Ecdysozoa, Philos. Trans. Roy. Soc. L. Ser. B, Biol. Sci., 2008, vol. 363, no. 1496, pp. 1529–1537.
Thompson, J.D., Gibson, T.J., Plewniak, F., Jeanmougin, F., and Higgins, D.G., The CLUSTALX windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools, Nucleic Acids Res., 1997, vol. 25, pp. 4876–4882.
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Original Russian Text © B.D. Efeykin, V.Y. Schmatko, S.E. Spiridonov, 2016, published in Izvestiya Akademii Nauk, Seriya Biologicheskaya, 2016, No. 1, pp. 41–49.
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Efeykin, B.D., Schmatko, V.Y. & Spiridonov, S.E. Comparative phylogenetic informativity of single ribosomal cluster regions in freshwater horsehair worms (Gordiacea, Nematomorpha). Biol Bull Russ Acad Sci 43, 34–41 (2016). https://doi.org/10.1134/S1062359016010040
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DOI: https://doi.org/10.1134/S1062359016010040