M.V. Boland, M.K. Markey, and R.F. Murphy, “Classification of Protein Localization Patterns Obtained via Fluorescence Light Microscopy,” in 19th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, Chicago, IL, USA, 1997, pp. 594–597.
M.V. Boland, M.K. Markey, and R.F. Murphy, “Automated Recognition of Patterns Characteristic of Subcellular Structures in Fluorescence Microscopy Images,” Cytometry
, vol. 33, 1998, pp. 366–375.CrossRef
R.F. Murphy, M.V. Boland, and M. Velliste, “Towards a Systematics for Protein Subcellular Location: Quantitative Description of Protein Localization Patterns and Automated Analysis of Fluorescence Microscope Images,” in Proceedings of the Eighth International Conference on Intelligent Systems for Molecular Biology,San Diego, 2000, pp. 251–259.
M.V. Boland and R.F. Murphy, “A Neural Network Classifier Capable of Recognizing the Patterns of All Major Subcellular Structures in Fluorescence Microscope Images of HeLa Cells,” Bioinformatics
, vol. 17, 2001, pp. 1213–1223.CrossRef
J.W. Jarvik, S.A. Adler, C.A. Telmer, V. Subramaniam, and A.J. Lopez, “CD-Tagging: A New Approach to Gene and Protein Discovery and Analysis,” Biotechniques, vol. 20, 1996, pp. 896–904.
C.A. Telmer, P.B. Berget, B. Ballou, R.F. Murphy, and J.W. Jarvik, “Epitope Tagging Genomic DNA Using a CD-Tagging Tn10 Minitransposon,” Biotechniques, vol. 32, 2002, pp. 422–430.
J.W. Jarvik, G.W. Fisher, C. Shi, L. Hennen, C. Hauser, S. Adler, and P.B. Berget, “In Vivo Functional Proteomics: Mammalian Genome Annotation Using CD-Tagging,” BioTechniques, vol. 33, 2002, pp. 852–867.
M.M. Rolls, P.A. Stein, S.S. Taylor, E. Ha, F. McKeon, and T.A. Rapoport, “A Visual Screen of a GFP-Fusion Library Identifies a New Type of Nuclear Envelope Membrane Protein,” J. Cell Biol
., vol. 146, 1999, pp. 29–44.CrossRef
A. Kumar, K.-H. Cheung, P. Ross-Macdonald, P.S.R. Coelho, P. Miller, and M. Snyder, “TRIPLES:ADatabase of Gene Function in Saccharomyces Cerevisiae,” Nucleic Acids Research
, vol. 28, 2000, pp. 81–84.CrossRef
G. Habeler, K. Natter, G.G. Thallinger, M.E. Crawford, S.D. Kohlwein, and Z. Trajanoski, “YPL.db: The Yeast Protein Localization Database,” Nucleic Acids Research
, vol. 30, 2002, pp. 80–83.CrossRef
R.I. Jennrich, “Stepwise Discriminant Analysis,” in Statistical Methods for Digital Computers, K. Enslein, A. Ralston, and H.S. Wilf (Eds.), John Wiley & Sons: New York, 1977, pp. 77–95.
A. Danckaert, E. Gonzalez-Couto, L. Bollondi, N. Thompson, and B. Hayes, “Automated Recognition of Intracellular Organelles in Confocal Microscope Images,” Traffic
, vol. 3, 2002, pp. 66–73.CrossRef
R.F. Murphy, M. Velliste, J. Yao, and G. Porreca, “Searching Online Journals for Fluorescence Microscope Images Depicting Protein Subcellular Locations,” in Proceedings of the 2nd IEEE International Symposium on Bio-Informatics and Biomedical Engineering (BIBE 2001), Bethesda, MD, USA, 2001, pp. 119–128.
M.K. Markey, M.V. Boland, and R.F. Murphy, “Towards Objective Selection of Representative Microscope Images,” Biophys. J.
, vol. 76, 1999, pp. 2230–2237.CrossRef
E.J.S. Roques and R.F. Murphy, “Objective Evaluation of Differences in Protein Subcellular Distribution,” Traffic
, vol. 3, 2002, pp. 61–65.CrossRef
M. Velliste and R.F. Murphy, “Automated Determination of Protein Subcellular Locations from 3D Fluorescence Microscope Images,” in Proceedings of the 2002 IEEE International Symposium on Biomedical Imaging (ISBI-2002), Bethesda, MD, USA, 2002, pp. 867–870.