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DNA Barcoding of an Assembly of Montane Andean Butterflies (Satyrinae): Geographical Scale and Identification Performance

  • Systematics, Morphology and Physiology
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Abstract

DNA barcoding is a technique used primarily for the documentation and identification of biological diversity based on mitochondrial DNA sequences. Butterflies have received particular attention in DNA barcoding studies, although varied performance may be obtained due to different scales of geographic sampling and speciation processes in various groups. The montane Andean Satyrinae constitutes a challenging study group for taxonomy. The group displays high richness, with more of 550 species, and remarkable morphological similarity among taxa, which renders their identification difficult. In the present study, we evaluated the effectiveness of DNA barcodes in the identification of montane Andean satyrines and the effect of increased geographical scale of sampling on identification performance. Mitochondrial sequences were obtained from 104 specimens of 39 species and 16 genera, collected in a forest remnant in the northwest Andes. DNA barcoding has proved to be a useful tool for the identification of the specimens, with a well-defined gap and producing clusters with unambiguous identifications for all the morphospecies in the study area. The expansion of the geographical scale with published data increased genetic distances within species and reduced those among species, but did not generally reduce the success of specimen identification. Only in Forsterinaria rustica (Butler, 1868), a taxon with high intraspecific variation, the barcode gap was lost and low support for monophyly was obtained. Likewise, expanded sampling resulted in a substantial increase in the intraspecific distance in Morpho sulkowskyi (Kollar, 1850); Panyapedaliodes drymaea (Hewitson, 1858); Lymanopoda obsoleta (Westwood, 1851); and Lymanopoda labda Hewitson, 1861; but for these species, the barcode gap was maintained. These divergent lineages are nonetheless worth a detailed study of external and genitalic morphology variation, as well as ecological features, in order to determine the potential existence of cryptic species. Even including these cases, DNA barcoding performance in specimen identification was 100% successful based on monophyly, an unexpected result in such a taxonomically complicated group.

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References

  • Adams MJ (1986) Pronophiline butterflies (Satyridae) of the three Andean cordilleras of Colombia. Zool J Linnean Soc 87:235–320

    Article  Google Scholar 

  • Adams MJ (1985) Speciation in the pronophiline butterflies (Satyridae) of the northern Andes. J Res Lepid Supplement 1:33–49

    Google Scholar 

  • Ashfaq M, Akhtar S, Khan AM, Adamowicz SJ, Hebert PDN (2013) DNA barcode analysis of butterfly species from Pakistan points towards regional endemism. Mol Ecol Resour 13:832–843

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Baselga A, Gómez-Rodríguez C, Vogler AP (2015) Multi-hierarchical macroecology at species and genetic levels to discern neutral and non-neutral processes. Glob Ecol Biogeogr 24:873–882

    Article  Google Scholar 

  • Bergsten J, Bilton DT, Fujisawa T, Elliott M, Monaghan MT, Balke M, Hendrich L, Geijer J, Herrmann J, Foster GN, Ribera I, Nilsson AN, Barraclough TG, Vogler AP (2012) The effect of geographical scale of sampling on DNA barcoding. Syst Biol 61:851–869

    Article  PubMed  PubMed Central  Google Scholar 

  • Bogdanowicz SM, Wallner WE, Bell TM, Harrison RG (1993) Asian gypsy moths (Lepidoptera: Lymantriidae) in North America: evidence from molecular data. Ann Entomol Soc Am 86:710–715

    Article  CAS  Google Scholar 

  • Boyle EE, Adamowicz SJ (2015) Community phylogenetics: assessing tree reconstruction methods and the utility of DNA barcodes. PLoS One 10(6):e0126662. doi:10.1371/journal.pone.0126662

    Article  PubMed  PubMed Central  Google Scholar 

  • Brown SD, Collins RA, Boyer S, Lefort MC, Malumbres-Olarte J, Vink CJ, Cruickshank RH (2012) Spider: an R package for the analysis of species identity and evolution, with particular reference to DNA barcoding. Mol Ecol Resour 12:562–565

    Article  PubMed  Google Scholar 

  • Casner KL, Pyrcz TW (2010) Patterns and timing of diversification in a tropical montane butterfly genus, Lymanopoda (Nymphalidae, Satyrinae). Ecography 33:251–259

    Article  Google Scholar 

  • Cassildé C, Blandin P, Silvain J-F (2012) Phylogeny of the genus Morpho Fabricius 1807: insights from two mitochondrial genes (Lepidoptera: Nymphalidae). Ann Soc Entomol Fr (N.S.) 48:173–188

  • Collins RA, Boykin LM, Cruickshank RH, Armstrong KF (2012) Barcoding’s next top model: an evaluation of nucleotide substitution models for specimen identification. Methods Ecol Evol 3:457–465

    Article  Google Scholar 

  • Collins RA, Cruickshank RH (2013) The seven deadly sins of DNA barcoding. Mol Ecol Resour 13:969–975

    CAS  PubMed  Google Scholar 

  • Cong Q, Grishin NV (2014) A new Hermeuptychia (Lepidoptera, Nymphalidae, Satyrinae) is sympatric and synchronic with H. sosybius in southeast US coastal plains, while another new Hermeuptychia species - not hermes - inhabits South Texas and Northeast Mexico. ZooKeys 91:43–91

    Google Scholar 

  • Corantioquia (2004) Programa integral de educación y comunicación a las comunidades de Angelópolis, Caldas y La Estrella, para la conservación y el manejo sostenible de los recursos naturales de la reserva forestal alto el romeral y la vía parque Angelópolis-Caldas. Fundación con Vida, Medellín, p 204

    Google Scholar 

  • Dasmahapatra KK, Elias M, Hill RI, Hoffman JI, Mallet J (2010) Mitochondrial DNA barcoding detects some species that are real, and some that are not. Mol Ecol Resour 10:264–273

    Article  CAS  PubMed  Google Scholar 

  • Dincă V, Montagud S, Talavera G, Hernández-Roldán J, Munguira ML, García-Barros E, Hebert PD, Vila R (2015) DNA barcode reference library for Iberian butterflies enables a continental-scale preview of potential cryptic diversity. Sci Rep 5:12395. doi:10.1038/srep12395

    Article  PubMed  PubMed Central  Google Scholar 

  • Dincă V, Zakharov EV, Hebert PDN, Vila R (2011) Complete DNA barcode reference library for a country’s butterfly fauna reveals high performance for temperate Europe. Proc Biol Sci 278:347–355

    Article  PubMed  Google Scholar 

  • Edgar RC (2004) MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res 32:1792–1797

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Elias M, Hill RI, Willmott KR, Dasmahapatra KK, Brower AV, Mallet J, Jiggins CD (2007) Limited performance of DNA barcoding in a diverse community of tropical butterflies. Proc Biol Sci 274:2881–2889

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Folmer O, Black M, Hoeh W, Lutz R, Vrijenhoek R (1994) DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates. Mol Mar Biol Biotechnol 3:294–299

    CAS  PubMed  Google Scholar 

  • Forster W (1964) Beiträge zur kenntnis der insektenfauna Boliviens XIX. Lepidoptera III Satyridae Veroffentlichungen der Zoologischen Staatssammlung München 8:51–188

    Google Scholar 

  • Hebert PDN, Penton EH, Burns JM, Janzen DH, Hallwachs W (2004) Ten species in one: DNA barcoding reveals cryptic species in the neotropical skipper butterfly Astraptes fulgerator. Proc Natl Acad Sci U S A 101:14812–14817

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Hermelin M (2007) Valle de Aburrá: ¿Quo vadis? Gestión y Ambiente 10:7–16

    Google Scholar 

  • Holdridge LR (1967) Life zone ecology. Tropical Science Center, San José, p 206

    Google Scholar 

  • Huemer P, Mutanen M, Sefc KM, Hebert PDN (2014) Testing DNA barcode performance in 1000 species of European Lepidoptera: large geographic distances have small genetic impacts. PLoS One 9:e115774. doi:10.1371/journal.pone.0115774

    Article  PubMed  PubMed Central  Google Scholar 

  • Janzen DH, Hallwachs W, Blandin P, Burns JM, Cadiou JM, Chacon I, Dapkey T, Deans AR, Epstein ME, Espinoza B, Franclemont JG, Haber WA, Hajibabaei M, Hall JP, Hebert PD, Gauld ID, Harvey DJ, Hausmann A, Kitching IJ, Lafontaine D, Landry JF, Lemaire C, Miller JY, Miller JS, Miller L, Miller SE, Montero J, Munroe E, Green SR, Ratnasingham S, Rawlins JE, Robbins RK, Rodriguez JJ, Rougerie R, Sharkey MJ, Smith MA, Solis MA, Sullivan JB, Thiaucourt P, Wahl DB, Weller SJ, Whitfield JB, Willmott KR, Wood DM, Woodley NE, Wilson JJ (2009) Integration of DNA barcoding into an ongoing inventory of complex tropical biodiversity. Mol Ecol Resour 9:Suppl s1 1–26

  • Joly S, Davies TJ, Archambault A, Bruneau A, Derry A, Kembel SW, Peres-Neto P, Vamosi J, Wheeler TA (2014) Ecology in the age of DNA barcoding: the resource, the promise and the challenges ahead. Mol Ecol Resour 14(2):221–232

    Article  CAS  PubMed  Google Scholar 

  • Kress WJ, García-Robledo C, Uriarte M, Erickson DL (2015) DNA barcodes for ecology, evolution, and conservation. Trends Ecol Evol 30(1):25–35

    Article  PubMed  Google Scholar 

  • Kress WJ, Erickson DL, Jones FA, Swenson NG, Perez R, Sanjur O, Bermingham E (2009) Plant DNA barcodes and a community phylogeny of a tropical forest dynamics plot in Panama. Proc Natl Acad Sci U S A 106:18621–18626

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Kreuzinger AJ, Fiedler K, Letsch H, Grill A (2015) Tracing the radiation of Maniola (Nymphalidae) butterflies: new insights from phylogeography hint at one single incompletely differentiated species complex. Ecol Evol 5:46–58

    Article  PubMed  Google Scholar 

  • Lamas G, Viloria AL, Pyrcz TW (2004) Nymphalidae. Satyrinae. Tribe Satyrini. Subtribe Pronophilina. In: Heppner JB (ed), Checklist: Part 4A. Hesperioidea – Papilionoidea Atlas of the Neotropical Lepidoptera, Volume 5A. Scientific Publisher, Gainesville, pp 206–217

  • Linares MC, Soto-Calderón ID, Lees DC, Anthony NM (2009) High mitochondrial diversity in geographically widespread butterflies of Madagascar: a test of the DNA barcoding approach. Mol Phylogenet Evol 50:485–495

    Article  CAS  PubMed  Google Scholar 

  • Lukhtanov VA, Sourakov A, Zakharov EV, Hebert PDN (2009) DNA barcoding central Asian butterflies: increasing geographical dimension does not significantly reduce the success of species identification. Mol Ecol Resour 9:1302–1310

    Article  PubMed  Google Scholar 

  • Marín MA, Giraldo CE, Marín AL, Álvarez CF, Pyrcz TW (2015) Differences in butterfly (Nymphalidae) diversity between hillsides and hilltop forest patches in the northern Andes. Stud. Neotrop Fauna Environ 50:194–203

    Article  Google Scholar 

  • Meier R, Shiyang K, Vaidya G, Ng PKL (2006) DNA barcoding and taxonomy in Diptera: a tale of high intraspecific variability and low identification success. Syst Biol 55:715–728

    Article  PubMed  Google Scholar 

  • Meyer CP, Paulay G (2005) DNA barcoding: error rates based on comprehensive sampling. PLoS Biol 3(12):e422. doi:10.1371/journal.pbio.0030422

    Article  PubMed  PubMed Central  Google Scholar 

  • Moritz C, Cicero C (2004) DNA barcoding: promise and pitfalls. PLoS Biol 2:e354. doi:10.1371/journal.pbio.0020354

    Article  PubMed  PubMed Central  Google Scholar 

  • Nattier R, Capdevielle-Dulac C, Cassildé C, Couloux A, Cruaud C, Lachaume G, Lamas G, Silvain J-F, Blandin P (2016) Phylogeny and diversification of the cloud forest Morpho sulkowskyi group (Lepidoptera, Nymphalidae) in the evolving Andes. Zool Scr:1–14. doi:10.1111/zsc.12226

  • Papadopoulou A, Bergsten J, Fujisawa T, Monaghan MT, Barraclough TG, Vogler AP (2008) Speciation and DNA barcodes: testing the effects of dispersal on the formation of discrete sequence clusters. Philos Trans R Soc Lond Ser B Biol Sci 363:2987–2996

    Article  Google Scholar 

  • Peña C, Malm T (2012) VoSeq: a voucher and DNA sequence web application. PLoS One 7(6):e39071. doi:10.1371/journal.pone.0039071

    Article  PubMed  PubMed Central  Google Scholar 

  • Prado BR, Pozo C, Valdez-Moreno M, Hebert PDN (2011) Beyond the colours: discovering hidden diversity in the Nymphalidae of the Yucatan peninsula in Mexico through DNA barcoding. PLoS One 6(11):e27776. doi:10.1371/journal.pone.0027776

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Pyrcz TW (2004) Pronophiline butterflies of the highlands of Chachapoyas in northern Peru: faunal survey, diversity and distribution patterns (Lepidoptera, Nymphalidae, Satyrinae). Genus 15(4):455–622

    Google Scholar 

  • Pyrcz TW, Garlacz R (2012) The presence–absence situation and its impact on the assemblage structure and interspecific relations of Pronophilina butterflies in the Venezuelan Andes (Lepidoptera: Nymphalidae). Neotrop Entomol 41:186–195

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Pyrcz TW, Rodríguez G (2007) Mariposas de la tribu Pronophilini en la Cordillera Occidental de los Andes de Colombia (Lepidoptera: Nymphalidae, Satyrinae). SHILAP Soc Hispano Luso Am Lepid 35:455–489

    Google Scholar 

  • Pyrcz TW, Wojtusiak J (2002) The vertical distribution of pronophiline butterflies (Nymphalidae, Satyrinae) along an elevational transect in Monte Zerpa (Cordillera de Mérida, Venezuela) with remarks on their diversity and parapatric distribution. Glob Ecol Biogeogr 11:211–221

    Article  Google Scholar 

  • Pyrcz TW, Clavijo A, Uribe S, Marín MA, Álvarez, CF, Zubek A (2016) Páramo de Belmira as an important centre of endemism in the northern Colombian Andes: new evidence from Pronophilina butterflies (Lepidoptera: Nymphalidae, Satyrinae, Satyrini). Zootaxa in press

  • Pyrcz TW, Wojtusiak J, Garlacz R (2009) Diversity and distribution patterns of Pronophilina butterflies (Lepidoptera: Nymphalidae: Satyrinae) along an altitudinal transect in North-Western Ecuador. Neotrop Entomol 38:716–726

    Article  PubMed  Google Scholar 

  • Pyrcz TW, Prieto C, Viloria ÁL, Andrade-C G (2013) New species of high elevation cloud forest butterflies of the genus Pedaliodes Butler from the northern Colombian Andes (Lepidoptera, Nymphalidae, Satyrinae). Zootaxa 3716(4):528–538

    Article  PubMed  Google Scholar 

  • Pyrcz TW, Willmott KR, Hall JPW, Viloria ÁL (2006) A review of the genus Manerebia Staudigner (Lepidoptera: Nymphalida: Satyrinae) in the northern Andes. J Res Lepid 39:37–79

    Google Scholar 

  • Rosero DA, Gutiérrez LA, Cienfuegos AV, Jaramillo LM, Correa MM (2010) Optimización de un procedimiento de extracción de ADN para mosquitos anofelinos. Rev Colomb Entomol 36:260–263

    CAS  Google Scholar 

  • Seraphim N, Marín MA, Freitas AVL, Silva-Brandão KL (2014) Morphological and molecular marker contributions to disentangling the cryptic Hermeuptychia hermes species complex (Nymphalidae: Satyrinae: Euptychiina). Mol Ecol Resour 14:39–49

    Article  CAS  PubMed  Google Scholar 

  • Silva-Brandão KL, Lyra ML, Freitas AVL (2009) Barcoding Lepidoptera: current situation and perspectives on the usefulness of a contentious technique. Neotrop Entomol 38:441–451

    Article  PubMed  Google Scholar 

  • Srivathsana A, Meiera R (2012) On the inappropriate use of Kimura-2-parameter (K2P) divergences in the DNA-barcoding literature. Cladistics 28:190–194

    Article  Google Scholar 

  • Talavera G, Lukhtanov VA, Rieppel L, Pierce NE, Vila R (2013) In the shadow of phylogenetic uncertainty: the recent diversification of the Lysandra butterflies through chromosomal changes. Mol Phylogenet Evol 69:469–478

    Article  PubMed  Google Scholar 

  • Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S (2011) MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28:2731–2739

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Valentini A, Pompanon F, Taberlet P (2009) DNA barcoding for ecologists. Trends Ecol Evol 24(2):110–117

    Article  PubMed  Google Scholar 

  • Viloria AL (2003) Historical biogeography and the origins of the satyrine butterflies of the tropical Andes (Lepidoptera: Rhopalocera). In: Morrone JJ, Llorente J (eds) Una perspectiva latinoamericana de la biogeografía. Universidad Nacional Autónoma de México, México, pp 247–261

    Google Scholar 

  • Viloria A, Pyrcz T, Orellana A (2010) A survey of the Neotropical montane butterflies of the subtribe Pronophilina (Lepidoptera, Nymphalidae) in the Venezuelan cordillera de la costa. Zootaxa 41:1–41

    Google Scholar 

  • Vodă R, Dapporto L, Dincă V, Shreeve TG, Khaldi M, Barech G, Rebbas K, Sammut P, Scalercio S, Hebert PDN, Vila R (2016) Historical and contemporary factors generate unique butterfly communities on islands. Scientific Reports 6:28828. doi:10.1038/srep28828

    Article  PubMed  PubMed Central  Google Scholar 

  • Wiemers M, Fiedler K (2007) Does the DNA barcoding gap exist?—a case study in blue butterflies (Lepidoptera: Lycaenidae). Front Zool 4:8. doi:10.1186/1742-9994-4-8

    Article  PubMed  PubMed Central  Google Scholar 

  • Wilson J-J, Sing K-W, Sofian-Azirun M (2013) Building a DNA barcode reference library for the true butterflies (Lepidoptera) of peninsula Malaysia: what about the subspecies? PLoS One 8:e79969. doi:10.1371/journal.pone.0079969

    Article  PubMed  PubMed Central  Google Scholar 

  • Yang M, Zhai Q, Yang Z, Zhang Y (2015) DNA barcoding satyrine butterflies (Lepidoptera: Nymphalidae) in China. Mitochondrial DNA 27(4):2523–2528

    PubMed  Google Scholar 

  • Zhang A-B, Muster C, Liang H-B, Zhu C-D, Crozier R, Wan P, Feng J, Ward RD (2012) A fuzzy-set-theory-based approach to analyse species membership in DNA barcoding. Mol Ecol 21:1848–1863

    Article  CAS  PubMed  Google Scholar 

  • Zubek A, Pyrcz TW (2011) The synonymy of Forsterinaria difficilis ( Forster ) and F. Anachoreta Pulido & Andrade (Lepidoptera: Nymphalidae: Satyrinae). Caldasia 22(2):217–225

    Google Scholar 

  • Zubek A, Pyrcz TW, Boyer P (2014) Description of a new species of the Andean butterfly genus Forsterinaria gray (Lepidoptera: Nymphalidae) with considerations on an apparently new structure in male genitalia. Neotrop Entomol 43:68–77

    Article  CAS  PubMed  Google Scholar 

  • Zwickl DJ (2006) Genetic algorithm approaches for the phylogenetic analysis of large biological sequence datasets under the maximum likelihood criterion. Ph.D. thesis, The University of Texas at Austin, Austin, EUA, p 115

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Acknowledgements

The authors would like to thank Noemy Seraphim, Leila Shirai, Rita Isabel Veléz, and the anonymous reviewers for critically reading the manuscript. This work was supported by the Corporación Universitaria Lasallista under grant [FCAA-07 2010] and Fundación BBVA (Proyecto MARIPOSA) [BIOCON08_021]. MAM acknowledges support of FAPESP (2014/16481-0) for the graduate fellowship and CFA does it to COLCIENCIAS (528/2011).

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Correspondence to M A Marín.

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Edited by Alberto S Corrêa – ESALQ/USP

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Table S1

Details of the sequences obtained from GenBank to test the effect of increased geographical scale on barcode performance. (PDF 86 kb)

Table S2

Barcode sequences greater than 500 base pairs (bp) that were recovered from specimens from the study area. (PDF 71 kb)

Table S3

Pairwise uncorrected p distances between the studied specimens. (XLS 628 kb)

Figure S1

NJ dendrogram based on uncorrected p distance, and ML tree (ln −15120.9727) with model GTR + G, with not collapsed branches. Obtained using the expanded geographic sampling matrix of 261 sequences from 112 species. (PDF 64 kb)

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Marín, M.A., Cadavid, I.C., Valdés, L. et al. DNA Barcoding of an Assembly of Montane Andean Butterflies (Satyrinae): Geographical Scale and Identification Performance. Neotrop Entomol 46, 514–523 (2017). https://doi.org/10.1007/s13744-016-0481-z

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