Skip to main content
Log in

Genetic analysis of seedling resistance to crown rust in five diploid oat (Avena strigosa) accessions

  • Plant Genetics • Original Paper
  • Published:
Journal of Applied Genetics Aims and scope Submit manuscript

Abstract

Crown rust, caused by Puccinia coronata Corda f. sp. avenae Eriks., is a serious menace in oats, for which resistance is an effective means of control. Wild diploid oat accessions are a source of novel resistances that first need to be characterised prior to introgression into locally adapted oat cultivars. A genetic analysis of resistance to crown rust was carried out in three diverse diploid oat accessions (CIav6956, CIav9020, PI292226) and two cultivars (Saia and Glabrota) of A. strigosa. A single major gene conditioning resistance to Australian crown rust pathotype (Pt) 0000–2 was identified in each of the three accessions. Allelism tests suggested that these genes are either the same, allelic, or tightly linked with less than 1 % recombination. Similarly, a single gene was identified in Glabrota, and possibly two genes in Saia; both cultivars previously reported to carry two and three crown rust resistance genes, respectively. The identified seedling resistance genes could be deployed in combination with other resistance gene(s) to enhance durability of resistance to crown rust in hexaploid oat. Current diploid and hexaploid linkage maps and molecular anchor markers (simple sequence repeat [SSR] and diversity array technology [DArT] markers) should facilitate their mapping and introgression into hexaploid oat.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Institutional subscriptions

Fig. 1

Similar content being viewed by others

References

  • Adhikari KN (1996) Genetic studies of stem rust resistance in oat and triticale. University of Sydney, PhD Thesis, Sydney

    Google Scholar 

  • Becher R (2007) EST- derived microsatellites as a rich source of molecular markers for oats. Plant Breed 126:274–278

    Article  CAS  Google Scholar 

  • Bonnett DG, Park RF, McIntosh RA, Oates JD (2002) The effects of temperature and light on interactions between Puccinia coronata f. sp. avenae and Avena spp. Australas Plant Pathol 31:185–192

    Article  Google Scholar 

  • Brake VM, Irwin JAG, Park RF (2001) Genetic variation in Australian isolates of Puccinia coronata f. sp. avenae using molecular and pathogenicity markers. Australas Plant Pathol 30:259–266

    Article  Google Scholar 

  • Brouwer JB, Oates JD (1986) Regional variation of Puccinia coronata avenae in Australia and its implication for oat breeding. Ann Appl Biol 109:269–277

    Article  Google Scholar 

  • Cabral AL, Park RF (2014) Seedling resistance to Puccinia coronata f. sp. avenae in Avena strigosa, A. barbata and A. sativa. Euphytica 196:385–395

    Article  Google Scholar 

  • Cabral AL, Karaoglu H, Park RF (2013) The use of microsatellite polymorphisms to characterise and compare genetic variability in Avena strigosa and A. barbata. Genet Resour Crop Evol 60:1153–1163

    Article  CAS  Google Scholar 

  • Carson ML (2009) Crown rust development and selection for virulence in Puccinia coronata f. sp. avenae in an oat multiline cultivar. Plant Dis 93:347–353

    Article  Google Scholar 

  • CDL (2006) Oat crown rust resistance genes. USDA, ARS, Cereal Disease Laboratory. http://www.cdl.umn.edu/res-gene/ocr.html. Accessed 12 Dec 2006

  • Dyck PL, Zillinsky FJ (1963) Inheritance of crown rust resistance transferred from diploid to hexaploid oats. Can J Genet Cytol 5:398

    Article  Google Scholar 

  • GRIN (2009) Germplasm Resources Information Network. USDA, ARS, National Genetic Resources Program. http://www.ars-grin.gov/. Accessed 14 Jan 2009

  • Hanson WD (1959) Minimum family sizes for the planning of genetic experiments. Agron J 51:711–715

    Article  Google Scholar 

  • Kiviharju EM (2009) Anther culture derived doubled haploids in oat. In: Touraev A, Forster BP, Jain SM (eds) Advances in Haploid Production in Higher Plants. Springer, Netherlands, pp 171–178

  • Kiviharju EM, Puolimatka M, Saastamoinen M (2000) Extension of anther culture to several genotypes of cultivated oats. Plant Cell Rep 19:674–679

  • Kramer HH, Burnham CR (1947) Methods of combining linkage intensity values from backcross, F2 and F3 genetic data. Genetics 32:379–390

    PubMed  CAS  PubMed Central  Google Scholar 

  • Kremer CA, Lee M, Holland JB (2001) A restriction fragment length polymorphism based linkage map of a diploid Avena recombinant inbred line population. Genome 44:192–204

    Article  PubMed  CAS  Google Scholar 

  • Li CD, Rossnagel BG, Scoles GJ (2000) The development of oat microsatellite markers and their use in identifying relationships among Avena species and oat cultivars. Theor Appl Genet 101:1259–1268

    Article  CAS  Google Scholar 

  • Marshall HG, Myers WM (1961) A cytogenetic study of certain Avena hybrids, and the inheritance of resistance in diploid and tetraploid varieties to races of crown rust. Crop Sci 1:29–34

    Article  Google Scholar 

  • Murphy HC (1935) Physiologic specialization in Puccinia coronata avenae. USDA Technical Bulletin No. 433, Washington, D.C

    Google Scholar 

  • Murphy HC, Zillinsky FJ, Simons MD, Grindeland R (1958) Inheritance of seed color and resistance to races of stem and crown rust in Avena strigosa. Agron J 50:539–541

    Article  Google Scholar 

  • O’Donoughue LS, Wang Z, Röder M, Kneen B, Leggett M, Sorrells ME, Tanksley SD (1992) An RFLP-based linkage map of oats based on a cross between two diploid taxa (Avena atlantica × A. hirtula). Genome 35:765–771

    Article  Google Scholar 

  • Pal N, Sandhu JS, Domier LL, Kolb FL (2002) Development and characterization of microsatellite and RFLP derived PCR markers in oat. Crop Sci 42:912–918

    Article  CAS  Google Scholar 

  • Park RF (2008) Breeding cereals for rust resistance in Australia. Plant Pathol 57:591–602

    Article  Google Scholar 

  • Park RF, Kavanagh P (2004) Cereal rust survey–Annual report 2003–2004. University of Sydney, Plant Breeding Institute, Cobbitty

    Google Scholar 

  • Park RF, Kavanagh P (2008) Cereal rust survey–Annual report 2007–2008. University of Sydney, Plant Breeding Institute, Cobbitty

    Google Scholar 

  • Park RF, Burdon JJ, McIntosh RA (1995) Studies on the origin, spread, and evolution of an important group of Puccinia recondita f. sp. tritici pathotypes in Australasia. Eur J Plant Pathol 101:613–622

    Article  Google Scholar 

  • Park RF, Burdon JJ, Jahoor A (1999) Evidence for somatic hybridization in the leaf rust pathogen of wheat (Puccinia recondita f. sp. tritici). Mycol Res 103:715–723

    Article  Google Scholar 

  • Rayapati PJ, Gregory JW, Lee M, Wise RP (1994) A linkage map of diploid Avena based on RFLP loci and a locus conferring resistance to nine isolates of Puccinia coronata var. ‘avenae’. Theor Appl Genet 89:831–837

    PubMed  CAS  Google Scholar 

  • Rines HW (1983) Oat anther culture: genotype effect on callus initiation and the production of a haploid plant. Crop Sci 23:268–272

    Article  Google Scholar 

  • Rines HW, Dahleen LS (1990) Haploid oat plants produced by application of maize pollen to emasculated oat florets. Crop Sci 30:1073–1078

    Article  Google Scholar 

  • Sidhu PK, Howes NK, Aung T, Zwer PK, Davies PA (2006) Factors affecting oat haploid production following oat × maize hybridization. Plant Breed 125:243–247

    Article  Google Scholar 

  • Simons MD (1970) Crown rust of oats and grasses. The American Phytopathological Society, Monograph No. 5

  • Simons MD, Sadanaga K, Murphy HC (1959) Inheritance of resistance of strains of diploid and tetraploid species of oats to races of the crown rust fungus. Phytopathology 49:257–259

    Google Scholar 

  • Simons MD, Martens JW, McKenzie RIH, Nishiyama I, Sadanaga K, Sebesta J, Thomas H (1978) Oats: a standardized system of nomenclature for genes and chromosomes and catalogue of genes governing characters. USDA Agriculture Handbook No. 509

  • Steinberg GJ, Fetch MJ, Fetch TG Jr (2005) Evaluation of Avena spp. accessions for resistance to oat stem rust. Plant Dis 89:521–525

    Article  Google Scholar 

  • Tanhuanpää P, Kalendar R, Schulman AH, Kiviharju E (2008) The first doubled haploid linkage map for cultivated oat. Genome 51:560–569

    Article  PubMed  Google Scholar 

  • Tanhuanpää P, Manninen O, Beattie A, Eckstein P, Scoles G, Rossnagel B, Kiviharju E (2012) An updated doubled haploid oat linkage map and QTL mapping of agronomic and grain quality traits from Canadian field trials. Genome 55:289–301

    Article  PubMed  Google Scholar 

  • Tinker NA, Kilian A, Wight CP, Uszynska KH, Wenzl P, Rines HW, Bjørnstad A, Howarth CJ, Jannink JL, Anderson JM, Rossnagel BG, Stuthman DD, Sorrells ME, Jackson EW, Tuvesson S, Kolb FL, Olsson O, Federizzi LC, Carson ML, Ohm HW, Molnar SJ, Scoles GJ, Eckstein PE, Bonman JM, Ceplitis A, Langdon T (2009) New DArT markers for oat provide enhanced map coverage and global germplasm characterization. BMC Genomics 10:39

    Article  PubMed  PubMed Central  Google Scholar 

  • Watson IA (1981) Wheat and its rust parasites in Australia. In: Evans LT, Peacock WJ (eds) Wheat science today and tomorrow. Cambridge University Press, United Kingdom, pp 129–147

    Google Scholar 

  • Yu GX, Wise RP (2000) An anchored AFLP-and retrotransposon-based map of diploid Avena. Genome 43:736–749

    Article  PubMed  CAS  Google Scholar 

Download references

Acknowledgments

The author thanks Prof. Robert McIntosh for his comments on the manuscript, and acknowledges funding from the Sir Alexander Hugh Thurburn Faculty Scholarship, University of Sydney and the Grains Research and Development Corporation (GRDC), Australia.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to A. L. Cabral.

Additional information

Communicated by: Andrzej Górny

Electronic supplementary material

Below is the link to the electronic supplementary material.

Supplementary Table S1

(DOC 100 kb)

Supplementary Table S2

(DOC 120 kb)

Supplementary Table S3

(DOC 82 kb)

Supplementary Table S4

(DOC 100 kb)

Supplementary Table S5

(DOC 115 kb)

Supplementary Table S6

(DOC 87 kb)

Supplementary Table S7

(DOC 84 kb)

Supplementary Table S8

(DOC 90 kb)

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Cabral, A.L., Park, R.F. Genetic analysis of seedling resistance to crown rust in five diploid oat (Avena strigosa) accessions. J Appl Genetics 57, 27–36 (2016). https://doi.org/10.1007/s13353-015-0302-9

Download citation

  • Received:

  • Revised:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s13353-015-0302-9

Keywords

Navigation