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pFungiway: a series of plasmid vectors used for gene manipulation in fungi

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Abstract

A series of plasmid vectors, named pFungiway, was constructed for the purpose of simple and versatile gene manipulation in a wide range of fungi. The backbone of these vectors consists of the binary plasmid pCAMBIA2200, which can be introduced into fungal cells by Agrobacterium tumefaciens-mediated transformation. Objective genes can be easily inserted into the vector by the use of Gateway technology, without relying on any restriction cleavage sites. The pFungiway vectors are composed of two types: expression vectors, in which the expression of the objective genes is driven by a constitutive promoter; and repression vectors, in which the expression of the endogenous target gene is repressed by RNA interference. Either of two genes conferring resistance to hygromycin B or G418 can be used as a selective marker. The availability of pFungiway vectors was confirmed by the use of fluorescent reporter genes in the basidiomycete Flammulina velutipes and in the plant pathogenic fungus Fusarium oxysporum.

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References

  • Baird GS, Zacharias DA, Tsien RY (2000) Biochemistry, mutagenesis, and oligomerization of DsRed, a red fluorescent protein from coral. Proc Natl Acad Sci U S A 97:11984–11989

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Bennett JW (1998) Mycotechnology: the role of fungi in biotechnology. J Biotechnol 66:101–107

    Article  CAS  PubMed  Google Scholar 

  • Burns C, Gregory KE, Kirby M, Cheung MK, Riquelme M, Elliott TJ, Challen MP, Bailey A, Foster GD (2005) Efficient GFP expression in the mushrooms Agaricus bisporus and Coprinus cinereus requires introns. Fungal Genet Biol 42:191–199

    Article  CAS  PubMed  Google Scholar 

  • Cullen D, Leong SA, Wilson LJ, Henner DJ (1987) Transformation of Aspergillus nidulans with the hygromycin-resistance gene, hph. Gene 57:21–26

    Article  CAS  PubMed  Google Scholar 

  • Daly R, Hearn MTW (2005) Expression of heterologous proteins in Pichia pastoris: a useful experimental tool in protein engineering and production. J Mol Recognit 18:119–138

    Article  CAS  PubMed  Google Scholar 

  • Frandsen RJN (2011) A guide to binary vectors and strategies for targeted genome modification in fungi using Agrobacterium tumefaciens-mediated transformation. J Microbiol Methods 87:247–262

    Article  CAS  PubMed  Google Scholar 

  • Gelvin SB (2003) Agrobacterium-mediated plant transformation: the biology behind the “gene-jockeying” tool. Microbiol Mol Biol Rev 67:16–37

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Gems D, Johnstone IL, Clutterbuck AJ (1991) An autonomously replicating plasmid transforms Aspergillus nidulans at high frequency. Gene 98:61–67

    Article  CAS  PubMed  Google Scholar 

  • Gerdes HH, Kaether C (1996) Green fluorescent protein: applications in cell biology. FEBS Lett 389:44–47

    Article  CAS  PubMed  Google Scholar 

  • Hannon GJ (2002) RNA interference. Nature 418:244–251

    Article  CAS  PubMed  Google Scholar 

  • Kirk O, Borchert TV, Fuglsang CC (2002) Industrial enzyme applications. Curr Opin Biotechnol 13:345–351

    Article  CAS  PubMed  Google Scholar 

  • Lan X, Sato K, Taguchi G, Zhou Z, Shimosaka M (2008) Characterization of a gene conferring red fluorescence isolated from an environmental DNA library constructed from soil bacteria. Biosci Biotechnol Biochem 72:1908–1914

    Article  CAS  PubMed  Google Scholar 

  • Lugones LG, Scholtmeijer K, Klootwijk R, Wessels JGH (1999) Introns are necessary for mRNA accumulation in Schizophyllum commune. Mol Microbiol 32:681–689

    Article  CAS  PubMed  Google Scholar 

  • Michielse CB, Hooykaas PJ, van den Hondel CA, Ram AF (2005) Agrobacterium-mediated transformation as a tool for functional genomics in fungi. Curr Genet 48:1–17

    Article  CAS  PubMed  Google Scholar 

  • Mullins ED, Chen X, Romaine P, Raina R, Geiser DM, Kang S (2001) Agrobacterium-mediated transformation of Fusarium oxysporum: an efficient tool for insertional mutagenesis and gene transfer. Phytopathology 91:173–180

    Article  CAS  PubMed  Google Scholar 

  • Okamoto T, Yamada M, Sekiya S, Okuhara T, Taguchi G, Inatomi S, Shimosaka M (2010) Agrobacterium tumefaciens-mediated transformation of the vegetative dikaryotic mycelium of the cultivated mushroom Flammulina velutipes. Biosci Biotechnol Biochem 74:2327–2329

    Article  CAS  PubMed  Google Scholar 

  • Oliveira JM, van der Veen D, de Graaff LH, Qin L (2008) Efficient cloning system for construction of gene silencing vectors in Aspergillus niger. Appl Microbiol Biotechnol 80:917–924

    Article  CAS  PubMed  Google Scholar 

  • Ruiz-Díez B (2002) Strategies for the transformation of filamentous fungi. J Appl Microbiol 92:189–195

    Article  PubMed  Google Scholar 

  • Saitoh K, Nishimura M, Kubo Y, Hayashi N, Minami E, Nishizawa Y (2008) Construction of a binary vector for knockout and expression analysis of rice blast fungus genes. Biosci Biotechnol Biochem 72:1380–1383

    Article  CAS  PubMed  Google Scholar 

  • Sambrook J, Russell DW (2001) Molecular cloning: a laboratory manual, 3rd edn. Cold Spring Harbor Laboratory Press, Cold Spring Harbor

    Google Scholar 

  • Sekiya S, Yamada M, Shibata K, Okuhara T, Yoshida M, Inatomi S, Taguchi G, Shimosaka M (2013) Characterization of a gene coding for a putative adenosine deaminase-related growth factor by RNA interference in the basidiomycete Flammulina velutipes. J Biosci Bioeng 115:360–365

    Article  CAS  PubMed  Google Scholar 

  • Shafran H, Miyara I, Eshed R, Prusky D, Sherman A (2008) Development of new tools for studying gene function in fungi based on the Gateway system. Fungal Genet Biol 45:1147–1154

    Article  CAS  PubMed  Google Scholar 

  • Toews MW, Warmbold J, Konzack S, Rischitor P, Veith D, Vienken K, Vinuesa C, Wei H, Fischer R (2004) Establishment of mRFP1 as a fluorescent marker in Aspergillus nidulans and construction of expression vectors for high-throughput protein tagging using recombination in vitro (GATEWAY). Curr Genet 45:383–389

    Article  CAS  PubMed  Google Scholar 

  • Tsuboi H, Koda A, Toda T, Minetoki T, Hirotsune M, Machida M (2005) Improvement of the Aspergillus oryzae enolase promoter (P-enoA) by the introduction of cis-element repeats. Biosci Biotechnol Biochem 69:206–208

    Article  CAS  PubMed  Google Scholar 

  • Zhu T, Wang W, Yang X, Wang K, Cui Z (2009) Construction of two Gateway vectors for gene expression in fungi. Plasmid 62:128–133

    Article  CAS  PubMed  Google Scholar 

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Acknowledgments

This work was supported by a Grant-in-Aid for Scientific Research (C) (19580086) from the Japan Society for the Promotion of Science (JSPS). We are indebted to the Division of Gene Research, Research Center for Human and Environmental Sciences, Shinshu University, for providing facilities.

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Correspondence to Makoto Shimosaka.

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Nishikawa, R., Yoshida, M., Noda, T. et al. pFungiway: a series of plasmid vectors used for gene manipulation in fungi. Ann Microbiol 66, 825–832 (2016). https://doi.org/10.1007/s13213-015-1166-2

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  • DOI: https://doi.org/10.1007/s13213-015-1166-2

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