Detection of GI and GII Noroviruses in Ground Water Using Ultrafiltration and TaqMan Real-time RT-PCR
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Noroviruses (NoVs) are a leading cause of epidemic and sporadic acute gastrointestinal illness globally. These viruses can potentially contaminate rural private wells and non-community drinking water systems, and cause waterborne disease outbreaks related to consumption of contaminated ground water. Detection of NoVs in water samples can be challenging because they are genetically and antigenically diverse, and noncultivable. In the present study, the detection limits of a novel broadly reactive GI assay and an existing GII NoV real-time TaqMan reverse transcriptase-polymerase chain reaction (RT-qPCR) assay in ground water concentrates was determined. Ground water samples (50 l) from two sources (Lawrenceville, GA and Gainesville, FL, USA) were seeded with electron microscopy-enumerated and RT-qPCR quantified NoV and concentrated using hollow-fiber ultrafiltration (UF) followed by either polyethylene glycol (PEG) precipitation or microconcentrators. Detection limits for GI NoV ranged from 1 × 104 (GA source) to 2 × 105 (FL source) virus particles in 50 l water samples (corresponding to 200–3,000 particles/l) and 5 × 104 (GA source) to 5 × 105 (FL source) virus particles (corresponding to 1,000–10,000 particles/l) for GII NoV. The reported UF method, sample processing procedures, and RT-qPCR assays should be effective tools for sensitive detection of NoVs in large-volume water samples.
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- Detection of GI and GII Noroviruses in Ground Water Using Ultrafiltration and TaqMan Real-time RT-PCR
Food and Environmental Virology
Volume 2, Issue 4 , pp 218-224
- Cover Date
- Print ISSN
- Online ISSN
- Additional Links
- Ground water
- Real-time RT-PCR
- Author Affiliations
- 1. Division of Foodborne, Waterborne, and Environmental Diseases, Centers for Disease Control and Prevention, National Center for Emerging and Zoonotic Infectious Diseases, 1600 Clifton Road NE, Mail Stop D-66, Atlanta, GA, 30329, USA
- 3. Atlanta Research and Education Foundation, Atlanta, GA, USA
- 2. Division of Viral Diseases, CDC, National Center for Immunization and Respiratory Diseases, Atlanta, GA, USA