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Performance of PCR-reverse blot hybridization assay for detection of rifampicin-resistant Mycobacterium leprae

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Abstract

Drug resistance in Mycobacterium leprae is a significant problem in countries where leprosy is endemic. A sensitive, specific, and high-throughput reverse blot hybridization assay (REBA) for the detection of genotypic resistance to rifampicin (RIF) was designed and evaluated. It has been shown that resistance to RIF in M. leprae involves mutations in the rpoB gene encoding the —subunit of the RNA polymerase. The PCR-REBA simultaneously detects both 6 wild-type regions and 5 different mutations (507AGC, 513GTG, 516TAT, 531ATG, and 531TTC) including the most prevalent mutations at positions 507 and 531. Thirty-one clinical isolates provided by Korea Institute of Hansen-s Disease were analyzed by PCR-REBA with RIF resistance of rpoB gene. As a result, missense mutations at codons 507 AGC and 531ATG with 2-nucleotide substitutions were found in one sample, and a missense mutation at codon 516 TAT and ΔWT6 (deletion of 530-534) was found in another sample. These cases were confirmed by DNA sequence analysis. This rapid, simple, and highly sensitive assay provides a practical alternative to sequencing for genotypic evaluation of RIF resistance in M. leprae.

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References

  • Ahmed, A., Engelberts, M.F., Boer, K.R., Ahmed, N., and Hartskeerl, R.A. 2009. Development and validation of a real-time PCR for detection of pathogenic leptospira species in clinical materials. PLoS One 4, e7093.

    Article  PubMed Central  PubMed  Google Scholar 

  • de Carsalade, G.Y., Wallach, D., Spindler, E., Pennec, J., Cottenot, F., and Flageul, B. 1997. Daily multidrug therapy for leprosy; results of a fourteen-year experience. Int. J. Lepr. Other. Mycobact. Dis. 65, 37–44.

    CAS  PubMed  Google Scholar 

  • Cambau, E., Chauffour-Nevejans, A., Tejmar-Kolar, L., Matsuoka, M., and Jarlier, V. 2012. Detection of antibiotic resistance in leprosy using GenoType LepraeDR, a novel ready-to-use molecular test. PLoS. Negl. Trop. Dis. 6, e1739.

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  • Cavusoglu, C., Hilmioglu, S., Guneri, S., and Bilgic, A. 2002. Characterization of rpoB mutations in rifampin-resistant clinical isolates of Mycobacterium tuberculosis from Turkey by DNA sequencing and line probe assay. J. Clin. Microbiol. 40, 4435–4438.

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  • Choi, G.E., Lee, S.M., Yi, J., Hwang, S.H., Kim, H.H., Lee, E.Y., Cho, E.H., Kim, J.H., Kim, H.J., and Chang, C.L. 2010. High-resolution melting curve analysis for rapid detection of rifampin and isoniazid resistance in Mycobacterium tuberculosis clinical isolates. J. Clin. Microbiol. 48, 3893–3898.

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  • Groathouse, N.A., Rivoire, B., Kim, H., Lee, H., Cho, S.N., Brennan, P.J., and Vissa, V.D. 2004. Multiple polymorphic loci for molecular typing of strains of Mycobacterium leprae. J. Clin. Microbiol. 42, 1666–1672.

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  • Gupta, U.D., Katoch, K., and Katoch, V.M. 2009. Study of rifampicin resistance and comparison of dapsone resistance of M. leprae in pre- and post-MDT era. Indian J. Lepr. 81, 131–134.

    CAS  PubMed  Google Scholar 

  • Ji, B. and Grosset, J. 2000. Combination of rifapentine-moxifloxacinminocycline (PMM) for the treatment of leprosy. Lepr. Rev. 71, S81–87.

    PubMed  Google Scholar 

  • Ji, B., Perani, E.G., Petinon, C., and Grosset, J.H. 1992. Bactericidal activities of single or multiple doses of various combinations of new antileprosy drugs and/or rifampin against M. leprae in mice. Int. J. Lepr. Other Mycobact. Dis. 60, 556–561.

    CAS  PubMed  Google Scholar 

  • Ji, B., Sow, S., Perani, E., Lienhardt, C., Diderot, V., and Grosset, J. 1998. Bactericidal activity of a single-dose combination of ofloxacin plus minocycline, with or without rifampin, against Mycobacterium leprae in mice and in lepromatous patients. Antimicrob. Agents Chemother. 42, 1115–1120.

    PubMed Central  CAS  PubMed  Google Scholar 

  • Jing, Z., Zhang, R., Zhou, D., and Chen, J. 2009. Twenty five years follow up of MBleprosy patients retreated with a modified MDT regimen after a full course of dapsone mono-therapy. Lepr. Rev. 80, 170–176.

    PubMed  Google Scholar 

  • Katoch, V.M. 2002. Advances in the diagnosis and treatment of leprosy. Expert. Rev. Mol. Med. 4, 1–14.

    Article  PubMed  Google Scholar 

  • Kramme, S., Bretzel, G., Panning, M., Kawuma, J., and Drosten, C. 2004. Detection and quantification of Mycobacterium leprae in tissue samples by real-time PCR. Med. Microbiol. Immunol. 193, 189–193.

    Article  CAS  PubMed  Google Scholar 

  • Maeda, S., Matsuoka, M., Nakata, N., Kai, M., Maeda, Y., Hashimoto, K., Kimura, H., Kobayashi, K., and Kashiwabara, Y. 2001. Multidrug resistant Mycobacterium leprae from patients with leprosy. Antimicrob. Agents Chemother. 45, 3635–3639.

    Article  CAS  Google Scholar 

  • Matsuoka, M., Aye, K.S., Kyaw, K., Tan, E.V., Balagon, M.V., Saunderson, P., Gelber, R., Makino, M., Nakajima, C., and Suzuki, Y. 2008. A novel method for simple detection of mutations conferring drug resistance in Mycobacterium leprae, based on a DNA microarray, and its applicability in developing countries. J. Med. Microbiol. 57, 1213–1219.

    Article  CAS  PubMed  Google Scholar 

  • Matsuoka, M., Budiawan, T., Aye, K.S., Kyaw, K., Tan, E.V., Cruz, E.D., Gelber, R., Saunderson, P., Balagon, V., and Pannikar, V. 2007. The frequency of drug resistance mutations in Mycobacterium leprae isolates in untreated and relapsed leprosy patients from Myanmar, Indonesia and the Philippines. Lepr. Rev. 78, 343–352.

    PubMed  Google Scholar 

  • Matsuoka, M., Suzuki, Y., Garcia, I.E., Fafutis-Morris, M., Vargas-Gonz- lez, A., Carre- o-Martinez, C., Fukushima, Y., and Nakajima, C. 2010. Possible mode of emergence for drug-resistant leprosy is revealed by an analysis of samples from Mexico. Jpn. J. Infect. Dis. 63, 412–416.

    CAS  PubMed  Google Scholar 

  • Matsuoka, M., Suzuki, Y., and Makino, M. 2010. Novel method for simple detection of mutations conferring drug resistance in Mycobacterium leprae, based on a DNA microarray, and its applicability in developing countries. Nihon. Hansenbyo. Gakkai. Zasshi. 79, 257–261.

    Article  PubMed  Google Scholar 

  • Mokrousov, I., Bhanu, N.V., Suffys, P.N., Kadival, G.V., Yap, S.F., Cho, S.N., Jordaan, A.M., Narvskaya, O., Singh, U.B., Gomes, H.M., et al. 2004. Multicenter evaluation of reverse line blot assay for detection of drug resistance in Mycobacterium tuberculosis clinical isolates. J. Microbiol. Methods 57, 323–335.

    Article  CAS  PubMed  Google Scholar 

  • Morgan, M., Kalantri, S., Flores, L., and Pai, M. 2005. A commercial line probe assay for the rapid detection of rifampicin resistance in Mycobacterium tuberculosis: a systematic review and metaanalysis. BMC Infect. Dis. 5, 62.

    Article  PubMed Central  PubMed  Google Scholar 

  • Rodrigues, L.C. and Lockwood, D. 2011. Leprosy now: epidemiology, progress, challenges, and research gaps. Lancet Infect. Dis. 11, 464–470.

    Article  PubMed  Google Scholar 

  • Sapkota, B.R., Ranjit, C., Neupane, K.D., and Macdonald, M. 2008. Development and evaluation of a novel multiple-primer PCR amplification refractory mutation system for the rapid detection of mutations conferring rifampicin resistance in codon 425 of the rpoB gene of Mycobacterium leprae. J. Med. Microbiol. 57, 179–184.

    Article  CAS  PubMed  Google Scholar 

  • Sekar, B., Arunagiri, K., Kumar, B.N., Narayanan, S., Menaka, K., and Oommen, P.K. 2011. Detection of mutations in folp1, rpoB and gyrA genes of M. leprae by PCR- direct sequencing-a rapid tool for screening drug resistance in leprosy. Lepr. Rev. 82, 36–45.

    PubMed  Google Scholar 

  • Shetty, V.P., Wakade, A.V., Ghate, S., Pai, V.V., Ganapati, R., and Antia, N.H. 2003. Viability and drug susceptibility testing of M. leprae using mouse footpad in 37 relapse cases of leprosy. Int. J. Lepr. Other Mycobact. Dis. 71, 210–217.

    Article  CAS  PubMed  Google Scholar 

  • Suzuki, Y. and Matsuoka, M. 2006. DNA microarray based rapid drug susceptibility test for Mycobacterium leprae. Nihon. Hansenbyo. Gakkai. Zasshi. 75, 271–277.

    Article  PubMed  Google Scholar 

  • World Health Organization. 2013. Global tuberculosis report. http://www.who.int/tb/publications/global_report/en/. World Health Organization (ed.) Appia, Geneva, Switzerland: WHO Press, 2013.

    Google Scholar 

  • You, E.Y., Kang, T.J., Kim, S.K., Lee, S.B., and Chae, G.T. 2005. Mutations in genes related to drug resistance in Mycobacterium leprae isolates from leprosy patients in Korea. J. Infect. 50, 6–11.

    Article  PubMed  Google Scholar 

  • Zhang, L., Namisato, M., and Matsuoka, M. 2004. A mutation at codon 516 in the rpoB gene of Mycobacterium leprae confers resistance to rifampin. Int. J. Lepr. Other Mycobact. Dis. 72, 468–472.

    Article  CAS  PubMed  Google Scholar 

  • de Zwaan, R., van Ingen, J., van Soolingen, D. 2014. Utility of rpoB gene sequencing for identification of nontuberculous mycobacteria in the Netherlands. J. Clin. Microbiol. 52, 2544–2551.

    Article  PubMed Central  PubMed  Google Scholar 

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Correspondence to Hyeyoung Lee.

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Wang, Hy., Kim, H., Kim, Y. et al. Performance of PCR-reverse blot hybridization assay for detection of rifampicin-resistant Mycobacterium leprae . J Microbiol. 53, 686–693 (2015). https://doi.org/10.1007/s12275-015-5057-9

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  • DOI: https://doi.org/10.1007/s12275-015-5057-9

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