Abstract
The goal of this study was to use an ecosystem-based approach to consider the effect of environmental conditions on the distribution and abundance of juvenile bay whiff and southern flounder within the Aransas Bay Complex, TX, USA. Species habitat models for both species were developed using boosted regression trees. Juvenile bay whiff were associated with low temperatures (<15 °C, 20–23 °C), moderate percent dry weight of sediments (25–60 %), salinity >10, and moderate to high dissolved oxygen (6–9 mg O2/l, 10–14 mg/l). Juvenile southern flounder were associated with low temperatures (<15 °C), low percent dry weight of sediment (<25 %), seagrass habitat, shallow depths (<1.2 m), and high dissolved oxygen (>8 mg O2/l). Our results indicate that conservation measures should focus along the eastern side of Aransas Bay and the north corner of Copano Bay to protect essential fish habitat. These findings provide a valuable new tool for fisheries managers to aid in the sustainable management of bay whiff and southern flounder and provide crucial information needed to prioritize areas for habitat conservation.
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Allen, R.L., and D.M. Baltz. 1997. Distribution and microhabitat use by flatfishes in a Louisiana estuary. Environmental Biology of Fishes 50: 85–103.
Applebaum, S., P.A. Montagna, and C. Ritter. 2005. Status and trends of dissolved oxygen in Corpus Christi Bay, Texas, U.S.A. Environmental Monitoring and Assessment 107: 297–311.
Breitburg, D. 2002. Effects of hypoxia, and the balance between hypoxia and enrichment, on coastal fishes and fisheries. Estuaries 25: 767–781.
Castillo-Riviera, M., A. Kobelkowsky, and A.M. Chavez. 2000. Feeding biology of the flatfish Citharichthysspilopterus (Bothidae) in a tropical estuary of Mexico. Journal of Applied Ichthyology 16: 73–78.
Chittaro, P.M., R.J. Finley, and P.S. Levin. 2009. Spatial and temporal patterns in the contribution of fish from their nursery habitats. Oecologia 160(1): 49–61.
Crowder, L.B., E.L. Hazen, N. Avissar, R. Bjorkland, C. Latanich, and M.B. Ogburn. 2008. The impacts of fisheries on marine ecosystems and the transition to ecosystem-based management. Annual Review of Ecology, Evolution, and Systematics 39: 259.
De'ath, G. 2007. Boosted trees for ecological modeling and prediction. Ecology 88: 243–251.
Deubler, E.E., Jr. 1960. Salinity as a factor in the control of growth and survival of postlarvae of the southern flounder, Paralichthys lethostigma. Bulletin of Marine Science of the Gulf and Caribbean 10: 338–345.
Dulvy, N.K., Y. Sadovy, and J.D. Reynolds. 2003. Extinction vulnerability in marine populations. Fish and Fisheries 4: 25–64.
Elith, J., C.H. Graham, and R.P. Anderson. 2006. Novel methods improve prediction of species' distributions from occurrence data. Ecography 29: 129–151.
Elith, J., J.R. Leathwick, and T. Hastie. 2008. A working guide to boosted regression trees. Journal of Animal Ecology 77: 802–813.
Fodrie, F.J., K.L. Heck, S.P. Powers Jr., W.M. Graham, K.L. and Robinson. 2010. Climate-related, decadal scale assemblage change of seagrass-associated fishes in the northern Gulf of Mexico. Global Change Biology 16: 48–59.
Friedman, J.H. 2001. Greedy function approximation: a gradient boosting machine. The Annals of Statistics 29: 1189–1232.
Froeschke, B.F., B. Sterba-Boatwright, and G.W. Stunz. 2011. Assessing southern flounder (Paralichthys lethostigma) long-term population trends in the northern Gulf of Mexico using time series analyses. Fisheries Research 108: 291–298.
Froeschke, J.T., and B.F. Froeschke. 2011. Spatio-temporal predictive model based on environmental factors for juvenile spotted sea trout in Texas estuaries using boosted regression trees. Fisheries Research 111(3): 131–138.
Froeschke, J.T., G.W. Stunz, and M.L. Wildhaber. 2010. Environmental influences on the occurrence of coastal sharks in estuarine waters. Marine Ecology Progress Series 401: 279–292.
Gibson, R.N. 1994. Impact of habitat quality and quantity on the recruitment of juvenile flatfishes. Netherlands Journal of Sea Research 32(2): 191–206.
Glass, L.A., J.R. Rooker, R.T. Kraus, and G.J. Holt. 2008. Distribution, condition, and growth of newly settled southern flounder (Paralichthys lethostigma) in the Galveston Bay Estuary, TX. Journal of Sea Research 59: 259–268.
Guisan, A., and W. Thuiller. 2005. Predicting species distribution: offering more than simple habitat models. Ecology Letters 8: 993–1009.
Günter, G.A. 1945. Studies of marine fishes of Texas. Publication of the Institute of Marine Science, University of Texas 1: 1–190.
Halpern, B.S., S. Walbridge, K.A. Selkoe, C.V. Kappel, F. Micheli, C. D'Agrosa, J.F. Bruno, K.S. Casey, C. Ebert, H.E. Fox, R. Fujita, D. Heinemann, H.S. Lenihan, E.M.P. Madin, M.T. Perry, E.R. Selig, M. Spalding, R. Steneck, and R. Watson. 2008. A global map of human impact on marine ecosystems. Science 319: 948–952.
Hayes, D.B., C.P. Ferreri, and W.W. Taylor. 1996. Linking fish habitat to their population dynamics. Canadian Journal of Fisheries and Aquatic Sciences 53(Suppl. 1): 383–390.
Hickman, C.P., Jr. 1968. Glomerular filtration and urine flow in the euryhaline Southern Flounder, Paralichthys lethostigma, in seawater. Canadian Journal of Zoology 46: 427–437.
Hilborn, R., T.A. Branch, B. Ernst, A. Magnussum, C.V. Minte-Vera, M.D. Scheurell, and J.L. Valero. 2003. State of the world's fisheries. Annual Review of Environment and Resources 28: 359–399.
Hiemstra, P.H., E.J. Pebesma, C.J.W. Twenhofel, and G.B.M. Heuvelink. 2008. Real-time automatic interpolation of ambient gammadose rates from the Dutch Radioactivity Monitoring Network. Computers and Geosciences 35(8): 1711–1721. doi:10.1016/j.cageo.2008.10.011.
Hijmans, R.J., van Etten, J., 2012. Raster: geographic analysis and modeling with raster data. R Package Version 2.0-08.
Hoese, H., and R.H. Moore. 1998. Fishes of the Gulf of Mexico, Texas, Louisiana, and adjacent waters, 2nd ed. College Station: Texas A&M University Press.
Houde, E.D., and E.S. Rutherford. 1993. Recent trends in estuarine fisheries: predictions of fish production and yield. Estuaries and Coast 16(2): 161–176.
Hughes, T.P., D.R. Bellwood, C. Folke, R.S. Steneck, and J. Wilson. 2005. New paradigms for supporting the resilience of marine ecosystems. Trends in Ecology & Evolution 20(7): 380–386.
Jackson, J.B.C., M.X. Kirby, W.H. Berger, K.A. Bjorndal, L.W. Botsford, B.J. Bourque, R.H. Bradbury, R. Cooke, J. Erlandson, J.A. Estes, T.P. Hughes, S. Kidwell, C.B. Lange, H.S. Lenihan, J.M. Pandolfi, C.H. Peterson, R.S. Steneck, M.J. Tegner, and R.R. Warner. 2001. Historical overfishing and the recent collapse of coastal ecosystems. Science 293: 629–638.
Leathwick, J.R., J. Elith, M.P. Francis, T. Hastie, and P. Taylor. 2006. Variation in demersal fish species richness in the oceans surrounding New Zealand: an analysis using boosted regression trees. Marine Ecology Progress Series 321: 267–281.
Leathwick, J.R., J. Elith, W.L. Chadderton, D. Rowe, and T. Hastie. 2008. Dispersal, disturbance, and the contrasting biogeographies of New Zealand's diadromous and non-diadromous fish species. Journal of Biogeography 35: 1481–1497.
Levin, P.S., and G.W. Stunz. 2005. Habitat triage for exploited fishes: can we identify essential “essential fish habitat?”. Estuarine, Coastal and Shelf Science 64: 70–78.
Lotze, H.K., H.S. Lenihan, B.J. Bourque, R.H. Bradbury, R.G. Cooke, M.C. Kay, S.M. Kidwell, M.X. Kirby, C.H. Peterson, and J.B.C. Jackson. 2006. Depletion, degradation, and recovery potential of estuaries and coastal seas. Science 312: 1806–1809.
Matlock, G.C. 1991. Growth, mortality, and yield of southern flounder in Texas. Northeast Gulf Science 12(1): 61–65.
McEachran, J.D., and J.D. Fechhelm. 2006. Fishes of the Gulf of Mexico. Volume 2: Scorpaeniformes to Tetraodontiformes, 1008. Austin: University of Texas Press.
Montagna, P.A., and J.T. Froeschke. 2009. Long-term biological effects of coastal hypoxia in Corpus Christi Bay, Texas, USA. Journal of Experimental Marine Biology and Ecology 381: S21–S30.
Nañez-James, S.E., G.W. Stunz, and S. Holt. 2009. Habitat use patterns of newly settled southern flounder, Paralichthys lethostigma, in Aransas–Copano Bay, Texas. Estuaries Coast 32: 350–359.
Natl. Mar. Fish. Serv., 2008. Annual report to Congress on the status of U.S. fisheries 2007.
Pauly, D., V. Christensen, S. Guènette, T.J. Pitcher, U.R. Sumaila, C.J. Walters, R. Watson, and D. Zeller. 2002. Towards sustainability in world fisheries. Nature 418: 689–695.
Pyke, C.R. 2004. Habitat loss confounds climate change impacts. Frontiers in Ecology and the Environment 2(4): 178–182.
R Development Core Team. 2009. R: a language and environment for statistical computing. R Foundation for Statistical Computing, Vienna. ISBN 3-900051-07-0, URL http://www.R-project.org.
Riechers, R., 2008. Regulations committee southern flounder update. Texas Parks and Wildlife Department Regulation Committee, Houston. http://www.tpwd.state.tx.us/business/feedback/meetings/2009/1106/transcripts/regulations_committee/index.phtml
Ruckelshaus, M.H., P.S. Levin, J.B. Johnson, and P.M. Kareiva. 2002. The Pacific salmon wars: what science brings to the challenge of recovering species. Annual Review of Ecology and Systematics 33: 665–706.
Saveliev, A.A., S.S. Mukharamova, N.A. Chizhikova, R. Budgey, and A.F. Zuur. 2007. Spatially continuous data analysis and modelling. In Analysing ecological data, ed. A.F. Zuur, E.N. Ieno, and G.M. Smith, 341–372. New York: Springer.
Shutter, B.J. 1990. Population-level indicators of stress. Am. Fish. Soc. Symp. (8): 145-166.
Stickney, R.R., and D.B. White. 1974. Effects of salinity on the growth of Paralichthys lethostigma postlarvae reared under aquaculture conditions. October 14-17, 1973. Proceedings of the Annual Conference of the Southeastern Association of Game and Fish Commissioners 27: 532–540.
Stokes, G.G. 1977. Life history studies of Southern Flounder (Paralichthys lethostigma) and gulf flounder (P. albigutta) in the Aransas Bay area of Texas. Texas Parks and Wildlife Department Technical Series: Number 25.
Stoner, A.W., J.P. Manderson, and J.P. Pessutti. 2001. Spatially explicit analysis of estuarine habitat for juvenile winter flounder: combining generalized additive models and geographic information systems. Marine Ecology Progress Series 213: 253–272.
Thuiller, W. 2007. Climate change and the ecologist. Nature 448: 550–552.
VanderKooy, S.J. 2000. The flounder fishery of the Gulf of Mexico, United States: a regional management plan. Ocean Springs: GSMFC.
Vaquer-Sunyer, R., and C.M. Duarte. 2008. Thresholds of hypoxia for marine biodiversity. Proceedings on the National Academy of Sciences 105: 15452–15457.
Walsh, H.J., and D.S. Peters. 1999. Habitat utilization by small flatfishes in a North Carolina estuary. Estuaries 22(3B): 803–813.
Whaley, S.D., J.J. Burd, and B.A. Robertson. 2007. Using estuarine landscape structure to model distribution patterns in nekton communities and in juveniles of fishery species. Marine Ecology Progress Series 330: 83–99.
Worm, B., and H.K. Lotze. 2009. Changes in marine biodiversity as an indicator of climate change. In Climate change: observed impacts on Planet Earth, ed. T. Letcher, 263–279. Oxford: Elsevier.
Zhou, S., A.D.M. Smith, A.E. Punt, A.J. Richardson, M. Gibbs, E.A. Fulton, S. Pascoe, C. Bulman, P. Bayliss, and K. Sainsbury. 2010. Ecosystem-based fisheries management requires a change to the selective fishing philosophy. PNAS 107: 9485–9489.
Acknowledgments
We thank the Mission-Aransas National Estuarine Research Reserve Fellowship Program and the Fisheries and Ocean Health Laboratory at the Harte Research Institute for the Gulf of Mexico Studies for funding and support of this work. In addition, we thank Jason Slocum, Laura Payne, Rachel Brewton, and Brittany Blomberg for all of their hard work in the field. We also thank S. Bortone, P. Tissot, B. Sterba-Boatwright, J. Fox, and L. McKinney for their assistance with and comments on the manuscript.
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Froeschke, B.F., Stunz, G.W., Robillard, M.M.R. et al. A Modeling and Field Approach to Identify Essential Fish Habitat for Juvenile Bay Whiff (Citharichthys spilopterus) and Southern Flounder (Paralichthys lethostigma) Within the Aransas Bay Complex, TX. Estuaries and Coasts 36, 881–892 (2013). https://doi.org/10.1007/s12237-013-9600-9
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DOI: https://doi.org/10.1007/s12237-013-9600-9