Abstract
Proteomic approach was applied to identify total proteins, particularly the enzymatic content, from wild cardoon flowers. As the selection of an appropriate sample preparation method is the key for getting reliable results, two different extraction/precipitation methods (trichloroacetic acid and phenol/ammonium acetate) were tested on fresh and lyophilized flowers. After two-dimensional electrophoresis (2D–E) separations, a better protein pattern was obtained after phenol extraction from lyophilized flowers. Only 46 % of the total analyzed spots resulted in a protein identification by mass spectrometry MALDI-TOF. Four proteases (cardosins A, E, G, and H), which have become a subject of great interest in dairy technology, were identified. They presented molecular weights and isoelectric points very close and high levels of homology between matched peptides sequences. The absence of the other cardosins (B, C, D, and F) could be an advantage, as it reduces the excessive proteolytic activity that causes bitter flavors and texture defects, during cheese making.
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Jacob M, Jaros D, Rohm H (2011) Recent advances in milk clotting enzymes. Int J Dairy Technol 64:14–33
Anusha R, Singh MK, Bindhu O (2014) Characterisation of potential milk coagulants from Calotropis gigantea plant parts and their hydrolytic pattern of bovine casein. Eur Food Res Technol 238:997–1006
Grozdanovic MM, Burazer L, Gavrovic-Jankulovic M (2013) Kiwifruit (Actinidia deliciosa) extract shows potential as a low-cost and efficient milk-clotting agent. Int Dairy J 32:46–52
Duarte AR, Duarte DMR, Moreira KA, Cavalcanti MTH et al (2009) Jacaratia corumbensis O. Kuntze a new vegetable source for milk-clotting enzymes. Braz Arch Biol Technol 52:1–9
Fernández J, Curt MD, Aguado PL (2006) Industrial applications of Cynara cardunculus L. for energy and other uses. Ind Crop Prod 24:222–229
da Costa DS, Pereira S, Pissarra J (2011) The heterologous systems in the study of cardosin B trafficking pathways. Plant Signal Behav 6:895–897
Veríssimo P, Esteves C, Faro C, Pires E (1995) The vegetable rennet of Cynara cardunculus L. contains two proteinases with chymosin and pepsin-like specificities. Biotechnol Lett 17:621–626
Cavalli SV, Lufrano D, Colombo ML, Priolo N (2013) Properties and applications of phytepsins from thistle flowers. Phytochmistry 92:16–32
Faro C, Ramalho-Santos M, Vieira M, Mendes A et al (1999) Cloning and characterization of cDNA encoding cardosin A, an RGD-containing plant aspartic proteinase. J Biol Chem 274:28724–28729
Sarmento AC, Lopes H, Oliveira CS, Vitorino R et al (2009) Multiplicity of aspartic proteinases from Cynara cardunculus L. Planta 230:429–439
Tang J, Wong RN (1987) Evolution in the structure and function of aspartic proteases. J Cell Biochem 33:53–63
Pimentel C, Van Der Straeten D, Pires E, Faro C, Rodrigues-Pousada C (2007) Characterization and expression analysis of the aspartic protease gene family of Cynara cardunculus L. FEBS J 274:2523–2539
Heimgartner U, Pietrzak M, Geertsen R, Brodelius P et al (1990) Purification and partial characterization of milk clotting proteases from flowers of Cynara cardunculus. Phytochmistry 29:1405–1410
Ordiales E, Martín A, Benito MJ, Hernández A et al (2012) Technological characterisation by free zone capillary electrophoresis (FCZE) of the vegetable rennet (Cynara cardunculus) used in “Torta del Casar” cheese-making. Food Chem 133:227–235
Rabilloud T, Lelong C (2011) Two-dimensional gel electrophoresis in proteomics: a tutorial. J Proteome 74:1829–1841
Saez V, Fasoli E, D'Amato A, Simó-Alfonso E, Righetti PG (2013) Artichoke and Cynar liqueur: Two (not quite) entangled proteomes. Biochimica et Biophysica Acta (BBA)-Proteins and Proteomics 1834:119–126
Hai-wei L, Zhao-pu L, Ling L, Geng-mao Z (2007) Studies on the Antifungal Activities and Chemical Components of Extracts from Helianthus tuberosus Leaves. Nat Prod Res Dev 19(3):405
Maldonado AM, Echevarría-Zomeño S, Jean-Baptiste S, Hernández M, Jorrín-Novo JV (2008) Evaluation of three different protocols of protein extraction for Arabidopsis thaliana leaf proteome analysis by two-dimensional electrophoresis. J Proteome 71:461–472
Saint-Denis T, Goupy J (2004) Optimization of a nitrogen analyser based on the Dumas method. Anal Chim Acta 515:191–198
Bchir B, Besbes S, Karoui R, Attia H et al (2012) Effect of air-drying conditions on physico-chemical properties of osmotically pre-treated pomegranate seeds. Food Bioprocess Technol 5:1840–1852
Laemmli UK (1970) Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227:680–685
Wang W, Tai F, Chen S (2008) Optimizing protein extraction from plant tissues for enhanced proteomics analysis. J Sep Sci 31:2032–2039
Boguth G, Harder A, Scheibe B, Wildgruber R, Weiss W (2000) The current state of two-dimensional electrophoresis with immobilized pH gradients. Electophoresis 21:1037–1053
Vâlcu CM, Schlink K (2006) Reduction of proteins during sample preparation and two-dimensional gel electrophoresis of woody plant samples. Proteomics 6:1599–1605
Vincent D, Wheatley MD, Cramer GR (2006) Optimization of protein extraction and solubilization for mature grape berry clusters. Electophoresis 27:1853–1865
Zheng Q, Song J, Doncaster K, Rowland E, Byers DM (2007) Qualitative and quantitative evaluation of protein extraction protocols for apple and strawberry fruit suitable for two-dimensional electrophoresis and mass spectrometry analysis. J Agric Food Chem 55:1663–1673
Pavoković D, Križnik B, Krsnik-Rasol M (2012) Evaluation of protein extraction methods for proteomic analysis of non-model recalcitrant plant tissues. Croat Chem Acta 85:177–183
Saravanan RS, Rose JK (2004) Critical evaluation of sample extraction techniques for enhanced proteomic analysis of recalcitrant plant tissues. Proteomics 4:2522–2532
Rodrigues SP, Ventura JA, Zingali R, Fernandes P (2009) Evaluation of sample preparation methods for the analysis of papaya leaf proteins through two-dimensional gel electrophoresis. Phytochem Anal 20:456–464
Wu X, Xiong E, Wang W, Scali M, Cresti M (2014) Universal sample preparation method integrating trichloroacetic acid/acetone precipitation with phenol extraction for crop proteomic analysis. Nat Protoc 9:362–374
Sampaio PN, Fortes AM, Cabral JM, Pais MS, Fonseca LP (2008) Production and characterization of recombinant cyprosin B in Saccharomyces cerevisiae. J Biosci Bioeng 105:305–312
Barros RM, Ferreira CA, Silva SV, Malcata FX (2001) Quantitative studies on the enzymatic hydrolysis of milk proteins brought about by cardosins precipitated by ammonium sulfate. Enzym Microb Technol 29:541–547
Silva S, Malcata F (2005) Partial identification of water-soluble peptides released at early stages of proteolysis in sterilized ovine cheese-like systems: influence of type of coagulant and starter. J Dairy Sci 88:1947–1954
Simões I, Mueller EC, Otto A, Bur D et al (2005) Molecular analysis of the interaction between cardosin A and phospholipase Dα. FEBS J 272:5786–5798
Hatsugai N, Kuroyanagi M, Yamada K, Meshi T et al (2004) A plant vacuolar protease, VPE, mediates virus-induced hypersensitive cell death. Science 305:855–858
Agboola SO, Chan HH, Zhao J, Rehman A (2009) Can the use of Australian cardoon (Cynara cardunculus L.) coagulant overcome the quality problems associated with cheese made from ultrafiltered milk? LWT- Food Sci Technol 42:1352–1359
de Carvalho MHC, d’Arcy-Lameta A, Roy-Macauley H, Gareil M et al (2001) Aspartic protease in leaves of common bean (Phaseolus vulgaris L.) and cowpea (Vigna unguiculata L. Walp): enzymatic activity, gene expression and relation to drought susceptibility. FEBS Lett 492:242–246
Schaller A, Ryan CA (1996) Molecular cloning of a tomato leaf cDNA encoding an aspartic protease, a systemic wound response protein. Plant Mol Biol 31:1073–1077
Asakura T, Watanabe H, Abe K, Arai S (1995) Rice aspartic proteinase, oryzasin, expressed during seed ripening and germination, has a gene organization distinct from those of animal and microbial aspartic proteinases. Eur J Biochem 232:77–83
Panavas T, Pikula A, Reid PD, Rubinstein B, Walker EL (1999) Identification of senescence-associated genes from daylily petals. Plant Mol Biol 40:237–248
Thomas G (1992) MAP kinase by any other name smells just as sweet. Cell 68:3–6
Wilson C, Eller N, Gartner A, Vicente O, Heberle-Bors E (1993) Isolation and characterization of a tobacco cDNA clone encoding a putative MAP kinase. Plant Mol Biol 23:543–551
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We would like to thank Wallonie-Bruxelles International, University of Liège and University of Sfax for financial support to this study.
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Ben Amira, A., Bauwens, J., De Pauw, E. et al. Identification of proteins from wild cardoon flowers (Cynara cardunculus L.) by a proteomic approach. J Chem Biol 10, 25–33 (2017). https://doi.org/10.1007/s12154-016-0161-9
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DOI: https://doi.org/10.1007/s12154-016-0161-9