Abstract
Systemic lupus erythematosus (SLE) is a chronic autoimmune disease which involves many organs and presents with various symptoms. It has been shown that genetic and environmental factors play a major role in this disease and may affect the onset, activity, damage, and mortality of the disease. According to recent studies, methyl-CpG-binding protein 2 (MECP2) has been associated with SLE in various populations. Herein, we studied MECP2 polymorphism in Iranian lupus patients and controls. The study included a total of 884 samples of Iranian ancestry (492 independent SLE patients and 392 unrelated healthy controls). Healthy controls were gender-, ethnic-, and age-matched with the patients. Patient and control samples were genotyped for rs1734787, rs1734791, rs1734792, and rs17435 by applying the Allelic Discrimination Real-Time PCR System. Our results showed a significant association between rs1734787 and rs1734791 SNPs and the risk of SLE in the Iranian population (p = 0.028, p = 0.028), but did not show any significant association with rs1734792 and rs17435 SNPs (p = 075, p = 0.75). The rs1734787 C and the rs1734791 T allele frequencies in the patients were significantly higher than the control group (p = 0.014, p = 0.012). In addition, a significant CTAT haplotype frequency was observed in cases with SLE (p = 0.012), and a significant AAAT haplotype frequency was observed in the control group (p = 0.0003). However, there was no significant association between genotype frequencies and SLE patients. Also, there was no significant association between these SNPs and clinical features. The result of this study suggests that polymorphism in the MECP2 locus is associated with the susceptibility of Iranian SLE patients.
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Levy, D.M., and S. Kamphuis. 2012. Systemic lupus erythematosus in children and adolescents. Pediatric Clinics of North America 59: 345–364.
Bagavant, H., and S.M. Fu. 2009. Pathogenesis of kidney disease in systemic lupus erythematosus. Current Opinion in Rheumatology 21: 489.
Lateef, A., and M. Petri. 2012. Unmet medical needs in systemic lupus erythematosus. Arthritis Research and Therapy 14: S4.
Rahman, A. 2004. Autoantibodies, lupus and the science of sabotage. Rheumatology 43: 1326–1336.
Sawalha, A.H., R. Webb, S. Han, J.A. Kelly, K.M. Kaufman, R.P. Kimberly, M.E. Alarcon-Riquelme, J.A. James, T.J. Vyse, and G.S. Gilkeson. 2008. Common variants within MECP2 confer risk of systemic lupus erythematosus. PloS One 3: e1727.
Martens, H., I. Nolte, G. Van der Steege, M. Schipper, C. Kallenberg, G. Te Meerman, and M. Bijl. 2009. An extensive screen of the HLA region reveals an independent association of HLA class I and class II with susceptibility for systemic lupus erythematosus. Scandinavian Journal of Rheumatology 38: 256–262.
Yang, W., P. Ng, M. Zhao, N. Hirankarn, C.S. Lau, C.C. Mok, T.-M. Chan, R. Wong, K.W. Lee, and M.Y. Mok. 2009. Population differences in SLE susceptibility genes: STAT4 and BLK, but not PXK, are associated with systemic lupus erythematosus in Hong Kong Chinese. Genes and Immunity 10: 219–226.
Rhodes, B., and T. Vyse. 2008. The genetics of SLE: an update in the light of genome-wide association studies. Rheumatology 47: 1603–1611.
Koelsch, K.A., R. Webb, M. Jeffries, M.G. Dozmorov, M.B. Frank, J.M. Guthridge, J.A. James, J.D. Wren, and A.H. Sawalha. 2013. Functional characterization of the MECP2/IRAK1 lupus risk haplotype in human T cells and a human MECP2 transgenic mouse. Journal of Autoimmunity 41: 168–174.
Alonso-Perez, E., M. Suarez-Gestal, M. Calaza, J. Ordi-Ros, E. Balada, M. Bijl, C. Papasteriades, P. Carreira, F.N. Skopouli, and T. Witte. 2012. Further evidence of subphenotype association with systemic lupus erythematosus susceptibility loci: a European cases only study. PloS One 7: e45356.
Webb, R., J.D. Wren, M. Jeffries, J.A. Kelly, K.M. Kaufman, Y. Tang, M.B. Frank, J. Merrill, R.P. Kimberly, and J.C. Edberg. 2009. Variants within MECP2, a key transcription regulator, are associated with increased susceptibility to lupus and differential gene expression in patients with systemic lupus erythematosus. Arthritis and Rheumatism 60: 1076–1084.
Mirkazemi, S., M. Akbarian, A.R. Jamshidi, R. Mansouri, S. Ghoroghi, Y. Salimi, Z. Tahmasebi, and M. Mahmoudi. 2013. Association of STAT4 rs7574865 with susceptibility to systemic lupus erythematosus in Iranian population. Inflammation 36: 1548–1552.
Roe, B. A., J. Crabtree, and A. Khan. 1995. Methods for DNA isolation. Part III. Protocols for recombinant DNA isolation, cloning, and sequencing [Internet edition]. Norman, OK: University of Oklahoma: 2488–2498.
Benjamini, Y., and Y. Hochberg. 1995. Controlling the false discovery rate: a practical and powerful approach to multiple testing. Journal of the Royal Statistical Society. Series B (Methodological): 289–300.
Yong, Y., and H. Lin. 2005. SHEsis, a powerful software platform for analyses of linkage disequilibrium, haplotype construction, and genetic association at polymorphism loci. Cell Research 15: 97–98.
Crispín, J.C., S.-N.C. Liossis, K. Kis-Toth, L.A. Lieberman, V.C. Kyttaris, Y.-T. Juang, and G.C. Tsokos. 2010. Pathogenesis of human systemic lupus erythematosus: recent advances. Trends in Molecular Medicine 16: 47–57.
Jakes, R.W., S.C. Bae, W. Louthrenoo, C.C. Mok, S.V. Navarra, and N. Kwon. 2012. Systematic review of the epidemiology of systemic lupus erythematosus in the Asia Pacific region: prevalence, incidence, clinical features, and mortality. Arthritis Care & Research 64: 159–168.
Pons-Estel, G. J., G. S. Alarcón, L. Scofield, L. Reinlib, and G. S. Cooper. 2010. Understanding the epidemiology and progression of systemic lupus erythematosus. In Seminars in Arthritis and Rheumatism. Elsevier. 257–268
Connelly, K., E. Morand, and A. Hoi. 2013. Asian ethnicity in systemic lupus erythematosus: an Australian perspective. Internal Medicine Journal 43: 618–624.
Askanase, A., K. Shum, and H. Mitnick. 2012. Systemic lupus erythematosus: an overview. Social Work in Health Care 51: 576–586.
Moser, K.L., J.A. Kelly, C.J. Lessard, and J.B. Harley. 2009. Recent insights into the genetic basis of systemic lupus erythematosus. Genes and Immunity 10: 373–379.
Kaufman, K. M., J. Zhao, J. A. Kelly, T. Hughes, A. Adler, E. Sanchez, J. O. Ojwang, C. D. Langefeld, J. T. Ziegler, and A. H. Williams. 2012. Fine mapping of Xq28: both MECP2 and IRAK1 contribute to risk for systemic lupus erythematosus in multiple ancestral groups. Annals of the rheumatic diseases: annrheumdis-2012-201851.
Singh, J., A. Saxena, J. Christodoulou, and D. Ravine. 2008. MECP2 genomic structure and function: insights from ENCODE. Nucleic Acids Research 36: 6035–6047.
Mnatzakanian, G.N., H. Lohi, I. Munteanu, S.E. Alfred, T. Yamada, P.J. MacLeod, J.R. Jones, S.W. Scherer, N.C. Schanen, and M.J. Friez. 2004. A previously unidentified MECP2 open reading frame defines a new protein isoform relevant to Rett syndrome. Nature Genetics 36: 339–341.
Kriaucionis, S., and A. Bird. 2004. The major form of MeCP2 has a novel N-terminus generated by alternative splicing. Nucleic Acids Research 32: 1818–1823.
Lewis, J.D., R.R. Meehan, W.J. Henzel, I. Maurer-Fogy, P. Jeppesen, F. Klein, and A. Bird. 1992. Purification, sequence, and cellular localization of a novel chromosomal protein that binds to methylated DNA. Cell 69: 905–914.
Meehan, R., J.D. Lewis, and A.P. Bird. 1992. Characterization of MeCP2, a vertebrate DNA binding protein with affinity for methylated DNA. Nucleic Acids Research 20: 5085–5092.
Nan, X., R.R. Meehan, and A. Bird. 1993. Dissection of the methyl-CpG binding domain from the chromosomal protein MeCP2. Nucleic Acids Research 21: 4886–4892.
Roloff, T.C., H.H. Ropers, and U.A. Nuber. 2003. Comparative study of methyl-CpG-binding domain proteins. BMC Genomics 4: 1.
Damen, D., and R. Heumann. 2013. MeCP2 phosphorylation in the brain: from transcription to behavior. Biological Chemistry 394: 1595–1605.
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This work was supported by a research grant (grant number 93-01-30-24094) from the Deputy of Research, Tehran University of Medical Sciences, Tehran, Iran.
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Alesaeidi, S., Karami, J., Mahmoudi, M. et al. Methyl-CpG-Binding Protein 2 (MECP2) Polymorphism in Iranian Patients with Systemic Lupus Erythematosus. Inflammation 38, 2185–2190 (2015). https://doi.org/10.1007/s10753-015-0201-6
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DOI: https://doi.org/10.1007/s10753-015-0201-6