Skip to main content

Advertisement

Log in

Plasmodium falciparum Werner homologue is a nuclear protein and its biochemical activities reside in the N-terminal region

  • Original Article
  • Published:
Protoplasma Aims and scope Submit manuscript

Abstract

RecQ helicases, also addressed as a gatekeeper of genome, are an inevitable family of genome scrutiny proteins conserved from prokaryotes to eukaryotes and play a vital role in DNA metabolism. The deficiencies of three RecQ proteins out of five are involved in genetic abnormalities like Bloom syndrome (BS), Werner syndrome (WS), and Rothmund–Thomson syndrome (RTS). It is noteworthy that Plasmodium falciparum contains only two members of the RecQ family as opposed to five members present in the host Homo sapiens. In the present study, we report the biochemical characterization of the homologue of Werner (Wrn) helicase from P. falciparum 3D7 strain. Although there are significant sequence conservations between Wrn helicases of both H. sapiens and P. falciparum as well as among all the other Plasmodium species, they contain some peculiar differences also. In silico studies reveal that PfWrn is evolutionarily close to the bacterial RecQ protein. The N-terminal fragment (PfWrnN) contains all the helicase motifs along with all the functional domains and the predicted structure resembles with the human RecQ1 protein, whereas the C-terminal fragment (PfWrnC) contains no significant domain. Biochemical characterization further revealed that purified recombinant PfWrnN shows ATPase and DNA helicase activity in 3′ to 5′ direction, but PfWrnC lacks the ATPase and helicase activities. Immunofluorescence study shows that PfWrn is expressed in all the stages of intraerythrocytic development of the P. falciparum 3D7 strain and localizes distinctly in the nucleus. This study can be used for further characterization of RecQ helicases that will aid in understanding the physiological significance of these helicases in the malaria parasite.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3
Fig. 4
Fig. 5
Fig. 6
Fig. 7

Similar content being viewed by others

References

  • Ahmad M, Ansari A, Tarique M, Satsangi AT, Tuteja R (2012) Plasmodium falciparum UvrD helicase translocates in 3′ to 5′ direction, colocalizes with MLH and modulates its activity through physical interaction. PLoS ONE 7:e49385

    Article  PubMed  CAS  PubMed Central  Google Scholar 

  • Ahmad M, Tuteja R (2013) Plasmodium falciparum RuvB2 translocates in 5′-3′ direction, relocalizes during schizont stage and its enzymatic activities are up regulated by RuvB3 of the same complex. Biochim Biophys Acta 1834:2795–2811

    Article  PubMed  CAS  Google Scholar 

  • Chen CF, Brill SJ (2014) Multimerization domains are associated with apparent strand exchange activity in BLM and WRN DNA helicases. DNA Repair (Amst) 22:137–146

    Article  CAS  Google Scholar 

  • Croteau DL, Popuri V, Opresko PL, Bohr VA (2014) Human RecQ helicases in DNA repair, recombination, and replication. Annu Rev Biochem 83:519–552

    Article  PubMed  CAS  PubMed Central  Google Scholar 

  • Dormoi J, Savini H, Amalvict R, Baret E, Pradines B (2014) In vitro interaction of lumefantrine and piperaquine by atorvastatin against Plasmodium falciparum. Malar J 13:189

    Article  PubMed  PubMed Central  Google Scholar 

  • Edaye S, Reiling SJ, Leimanis ML, Wunderlich J, Rohrbach P, Georges E (2014) A 2-amino quinoline, 5-(3-(2-(7-chloroquinolin-2-yl)ethenyl)phenyl)-8-dimethylcarbamyl-4,6-dithiaoctanoic acid, interacts with PfMDR1 and inhibits its drug transport in Plasmodium falciparum. Mol Biochem Parasitol

  • Gangloff S, McDonald JP, Bendixen C, Arthur L, Rothstein R (1994) The yeast type I topoisomerase Top3 interacts with Sgs1, a DNA helicase homolog: a potential eukaryotic reverse gyrase. Mol Cell Biol 14:8391–8398

    Article  PubMed  CAS  PubMed Central  Google Scholar 

  • German J (1993) Bloom syndrome: a Mendelian prototype of somatic mutational disease. Medicine (Baltimore) 72:393–406

    Article  CAS  Google Scholar 

  • Gray MD, Wang L, Youssoufian H, Martin GM, Oshima J (1998) Werner helicase is localized to transcriptionally active nucleoli of cycling cells. Exp Cell Res 242:487–494

    Article  PubMed  CAS  Google Scholar 

  • Hickson ID (2003) RecQ helicases: caretakers of the genome. Nat Rev Cancer 3:169–178

    Article  PubMed  CAS  Google Scholar 

  • Kowalczykowski SC, Dixon DA, Eggleston AK, Lauder SD, Rehrauer WM (1994) Biochemistry of homologous recombination in Escherichia coli. Microbiol Rev 58:401–465

    PubMed  CAS  PubMed Central  Google Scholar 

  • Linder P (2006) Dead-box proteins: a family affair—active and passive players in RNP-remodeling. Nucleic Acids Res 34:4168–4180

    Article  PubMed  CAS  PubMed Central  Google Scholar 

  • Maity J, Bohr VA, Laskar A, Karmakar P (2014) Transient overexpression of Werner protein rescues starvation induced autophagy in Werner syndrome cells. Biochim Biophys Acta

  • Miotto O, Almagro-Garcia J, Manske M, Macinnis B, Campino S, Rockett KA, Amaratunga C, Lim P, Suon S, Sreng S et al (2013) Multiple populations of artemisinin-resistant Plasmodium falciparum in Cambodia. Nat Genet 45:648–655

    Article  PubMed  CAS  Google Scholar 

  • Murray JM, Lindsay HD, Munday CA, Carr AM (1997) Role of Schizosaccharomyces pombe RecQ homolog, recombination, and checkpoint genes in UV damage tolerance. Mol Cell Biol 17:6868–6875

    Article  PubMed  CAS  PubMed Central  Google Scholar 

  • Nakayama H, Nakayama K, Nakayama R, Irino N, Nakayama Y, Hanawalt PC (1984) Isolation and genetic characterization of a thymineless death-resistant mutant of Escherichia coli K12: identification of a new mutation (recQ1) that blocks the RecF recombination pathway. Mol Gen Genet 195:474–480

    Article  PubMed  CAS  Google Scholar 

  • Pradhan A, Chauhan VS, Tuteja R (2005) Plasmodium falciparum DNA helicase 60 is a schizont stage specific, bipolar and dual helicase stimulated by PKC phosphorylation. Mol Biochem Parasitol 144:133–141

    Article  PubMed  CAS  Google Scholar 

  • Qin W, Liu N, Wang L, Zhou M, Ren H, Bugnard E, Liu JL, Zhang LH, Vendome J, Hu JS et al. (2014) Characterization of biochemical properties of Bacillus subtilis RecQ Helicase. J Bacteriol

  • Seidel R, Szczelkun MD (2013) Switching roles for a helicase. Cell Cycle 12:3125–3126

    Article  PubMed  CAS  PubMed Central  Google Scholar 

  • Shen JC, Gray MD, Oshima J, Kamath-Loeb AS, Fry M, Loeb LA (1998a) Werner syndrome protein. I. DNA helicase and DNA exonuclease reside on the same polypeptide. J Biol Chem 273:34139–34144

    Article  PubMed  CAS  Google Scholar 

  • Shen JC, Gray MD, Oshima J, Loeb LA (1998b) Characterization of Werner syndrome protein DNA helicase activity: directionality, substrate dependence and stimulation by replication protein A. Nucleic Acids Res 26:2879–2885

    Article  PubMed  CAS  PubMed Central  Google Scholar 

  • Song L, Yuan F, Zhang Y (2010) Does a helicase activity help mismatch repair in eukaryotes? IUBMB Life 62:548–553

    Article  PubMed  CAS  Google Scholar 

  • Suntornthiticharoen P, Srila W, Chavalitshewinkoon-Petmitr P, Limudomporn P, Yamabhai M (2014) Characterization of recombinant malarial RecQ DNA helicase. Mol Biochem Parasitol 196:41–44

    Article  PubMed  CAS  Google Scholar 

  • Tuteja N, Tuteja R (2004a) Prokaryotic and eukaryotic DNA helicases. Essential molecular motor proteins for cellular machinery. Eur J Biochem 271:1835–1848

    Article  PubMed  CAS  Google Scholar 

  • Tuteja N, Tuteja R (2004b) Unraveling DNA helicases. Motif, structure, mechanism and function. Eur J Biochem 271:1849–1863

    Article  PubMed  CAS  Google Scholar 

  • Tuteja R (2007) Helicases—feasible antimalarial drug target for Plasmodium falciparum. FEBS J 274:4699–4704

    Article  PubMed  CAS  Google Scholar 

  • Tuteja R (2010) Genome wide identification of Plasmodium falciparum helicases: a comparison with human host. Cell Cycle 9:104–120

    Article  PubMed  CAS  Google Scholar 

  • White NJ, Pukrittayakamee S, Hien TT, Faiz MA, Mokuolu OA, Dondorp AM (2014) Malaria. Lancet 383:723–735

    Article  PubMed  Google Scholar 

  • Winstanley PA (2000) Chemotherapy for falciparum malaria: the armoury, the problems and the prospects. Parasitol Today 16:146–153

    Article  PubMed  CAS  Google Scholar 

  • Yu CE, Oshima J, Fu YH, Wijsman EM, Hisama F, Alisch R, Matthews S, Nakura J, Miki T, Ouais S et al (1996) Positional cloning of the Werner’s syndrome gene. Science 272:258–262

    Article  PubMed  CAS  Google Scholar 

Download references

Acknowledgments

This work is partially supported by the Department of Biotechnology grant. Infrastructural support from the Department of Biotechnology, Government of India, is gratefully acknowledged.

Conflict of interest

The authors declare no conflicts of interest.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Renu Tuteja.

Additional information

Handling Editor: Jan Raoul De Mey

Electronic supplementary material

Below is the link to the electronic supplementary material.

ESM 1

(PPTX 274 kb)

ESM 2

(PPTX 238 kb)

ESM 3

(PPTX 207 kb)

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Rahman, F., Tarique, M., Ahmad, M. et al. Plasmodium falciparum Werner homologue is a nuclear protein and its biochemical activities reside in the N-terminal region. Protoplasma 253, 45–60 (2016). https://doi.org/10.1007/s00709-015-0785-6

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s00709-015-0785-6

Keywords

Navigation