Skip to main content

Advertisement

Log in

Selection of controls in the study of human neurodegenerative diseases in old age

  • Neurology and Preclinical Neurological Studies - Original Article
  • Published:
Journal of Neural Transmission Aims and scope Submit manuscript

Abstract

Human post-mortem brain tissue, mostly provided by brain banks, is precious because most human neurodegenerative diseases are restricted in their complete forms to human beings. However, the agonal state, post-mortem delay between death and tissue processing, variable vulnerability of chromatin, RNAs, proteins and metabolites can compromise the usability of the tissue material. Such factors must be considered and assessed in every experimental approach. The use of controls for comparative purposes to analyze diseased cases is crucial as the basic conditions of controls must be the same as those encountered in problem cases. Age, gender, region, hemisphere, and clear characterisation of objective neuropathological changes (e.g., Alzheimer’s disease stages of Braak and Braak) in matching controls and problem cases must be considered in every study, and data must be clearly specified when presenting materials and methods in publications. Additional care must be taken regarding atypical neurodegenerative alterations, concomitant pathologies, and systemic diseases, together with drug consumption and treatments. The absence of neurological and mental symptoms and signs, although a sine qua non condition, is not sufficient to match control and problem cases for research.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Institutional subscriptions

Similar content being viewed by others

References

  • Azzi A, Dallmann R, Casserly A, Rehrauer H, Patrignani A, Maier B, Kramer A, Brown SA (2014) Circadian behavior is light-reprogrammed by plastic DNA methylation. Nat Neurosci 17:377–382

    Article  CAS  PubMed  Google Scholar 

  • Barrachina M, Moreno J, Villar-Menendez I, Juves S, Ferrer I (2012) Histone tail acetylation in brain occurs in an unpredictable manner after death. Cell Tissue Bank 13:597–606

    Article  CAS  PubMed  Google Scholar 

  • Bossers K, Wirz KTS, Meerhoff GF, Essing AHW, van Dongen JW, Houba P, Kruse CG, Varhaagen J, Swaab DF (2010) Concerted changes in transcripts in the pre-frontal cortex precede neuropathology in Alzheimer’s disease. Brain 133:3699–3723

    Article  PubMed  Google Scholar 

  • Cantuti-Castelvetri I, Keller-McGandy C, Bouzou B, Asteris G, Clark TW, Frosch MP, Standaert DG (2007) Effects of gender on nigral gene expression and Parkinson disease. Neurobiol Dis 26:606–614

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  • Crecelius A, Götz A, Arzberger T, Fröhlich T, Arnold GJ, Ferrer IA, Götz A, Arzberger T, Frölich T, Arnold GJ, Ferrer I, Kretzschmar H (2008) Assessing quantitative post-mortem changes in the grey white matter of the human frontal cortex proteome by 2D-DIGE. Proteomics 8:1276–1291

    Article  CAS  PubMed  Google Scholar 

  • Durrenberger PF, Fernando S, Kashefi SN, Ferrer I, Hauw JJ, Seilhean D, Smith C, Walker R, Al-Sarraj S, Troakes C, Palkovits M, Kasztner M, Huitinga I, Arzberger T, Dexter DT, Kretzschmar H, Reynolds R (2010) Effects of antemortem and postmortem variables on human brain mRNA quality: a BrainNet Europe study. J Neuropathol Exp Neurol 69:70–81

    Article  PubMed  Google Scholar 

  • Ferrer I (2012) Defining Alzheimer as a common age-related neurodegenerative process not inevitably leading to dementia. Prog Neurobiol 97:38–51

    Article  PubMed  Google Scholar 

  • Ferrer I (2014) Brain Banking. In: Aminoff MJ, Daroff RB (eds) Encyclopedia of the Neurological Sciences, vol 1, 2nd edn. Academic Press, Oxford, pp 467–473

    Chapter  Google Scholar 

  • Ferrer I, Santpere G, Arzberger T, Bell J, Blanco R, Boluda S, Budka H, Carmona M, Giaccone G, Krebs B, Limido L, Parchi P, Puig B, Strammiello R, Strobel T, Kretzschmar H (2007) Brain protein preservation largely depends on the postmortem storage temperature: implications for study of proteins in human neurologic diseases and management of brain banks: a BrainNet Europe Study. J Neuropathol Exp Neurol 66:35–46

    Article  CAS  PubMed  Google Scholar 

  • Ferrer I, Martinez A, Boluda S, Parchi P, Barrachina M (2008) Brain banks: benefits, limitations and cautions concerning the use of post-mortem brain tissue for molecular studies. Cell Tissue Bank 9:181–194

    Article  CAS  PubMed  Google Scholar 

  • Kovacs GG, Alafuzoff I, Al-Sarraj S, Arzberger T, Bogdanovic N, Capellari S, Ferrer I, Gelpi E, Kövari V, Kretzschmar H, Nagy Z, Parchi P, Seilhean D, Soininen H, Troakes C, Budka H (2008) Mixed brain pathologies in dementia: the BrainNet Europe consortium experience. Dement Geriatr Cogn Disord 26:343–350

    Article  PubMed  Google Scholar 

  • Kretzschmar H (2009) Brain banking: opportunities, challenges and meaning for the future. Nat Rev Neurosci 10:70–78

    Article  CAS  PubMed  Google Scholar 

  • Li JZ, Vawter MP, Walsh DM, Tomita H, Evans SJ, Choudary PV, Lopez JF, Avelar A, Shokoohi V, Chung T, Mesarwi O, Jones EG, Watson SJ, Akil H, Bunney WE Jr, Myers RM (2004) Systematic changes in gene expression in post-mortem human brains associated with tissue pH and terminal medical conditions. Hum Mol Genet 13:609–616

    Article  CAS  PubMed  Google Scholar 

  • Monoranu CM, Grünblatt E, Bartl J, Meyer A, Apfelbacher M, Keller D, Michel TM, Al-Saraj S, Schmitt A, Falkai P, Roggendorf W, Deckert J, Ferrer I, Riederer P (2011) Methyl- and acetyltransferases are stable epigenetic markers postmortem. Cell Tissue Bank 12:289–297

    Article  PubMed  Google Scholar 

  • Murphy DD, Ravina B (2003) Brain banking for neurodegenerative diseases. Curr Opin Neurol 16:459–463

    PubMed  Google Scholar 

  • Preece P, Cairns NJ (2003) Quantifying mRNA in post-mortem human brain: influence of gender, age at death, postmortem interval, brain pH, agonal state and inter-lobe mRNA variance. Brain Res Mol Brain Res 118:60–71

    Article  CAS  PubMed  Google Scholar 

  • Samarasekera N, Al-Shahi Salman R, Huitinga I, Klioueva N, McLean CA, Kretzschmar H, Smith C, Ironside JW (2013) Brain banking for neurological disorders. Lancet Neurol 12:1096–1105

    Article  PubMed  Google Scholar 

  • Tomita H, Vawter MP, Walsh DM, Evans SJ, Choudary PV, Li J, Overman KM, Atz ME, Myers RM, Jones EG, Watson SJ, Akil H, Bunney WE Jr (2004) Effect of agonal and post-mortem factors on gene expression profile: quality control in microarray analyses of post-mortem human brain. Biol Psychiatry 55:346–352

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  • Webster MJ (2006) Tissue preparation and banking. Prog Brain Res 158:3–14

    Article  CAS  PubMed  Google Scholar 

Download references

Acknowledgments

This paper is the result of fruitful collaboration within the context of BrainNet Europe (European Commission, 6th Framework Program Life Science: LSHM-CT-2004-503039). Thanks to T. Yohannan for editorial assistance.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to I. Ferrer.

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Ferrer, I. Selection of controls in the study of human neurodegenerative diseases in old age. J Neural Transm 122, 941–947 (2015). https://doi.org/10.1007/s00702-014-1287-y

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s00702-014-1287-y

Keywords

Navigation