Skip to main content

Advertisement

Log in

Co-segregation and heteroplasmy of two coding-region mtDNA mutations within a matrilineal pedigree

  • Original Investigation
  • Published:
Human Genetics Aims and scope Submit manuscript

Abstract

The ENG1 Leber’s hereditary optic neuropathy (LHON) family spans six generations and comprises more than 90 maternally related individuals. In this pedigree, the G:A LHON mutation at nucleotide position 11778 shows a complex pattern of segregation in which it is homoplasmic mutant in two branches, homoplasmic wildtype in another, and heteroplasmic in a fourth branch. In addition, there is co-segregation of the 11778 mutant allele and of a G:A silent polymorphism at nucleotide position 5471 in 18 of 19 family members. This co-segregation indicates that the two substitutions arose either simultaneously, or nearly so, in the same “founder” mtDNA molecule. However, the highly divergent mitochondrial allele ratios in the one family member suggest that there has been a complex origin and segregation “history” of these two substitutions. Taking all of the results into consideration, the evidence supports sequential single mutations at sites 5471 and 11778, in close temporal proximity, with subsequent segregation of the intermediate mutational genotype to high levels in one branch of the ENG1 LHON family. In other branches, either the double wildtype or double mutant genotype has become essentially homoplasmic.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Institutional subscriptions

Fig. 1

Similar content being viewed by others

References

  • Carelli V, Ross-Cisneros FN, Sadun AA (2002) Optic nerve degeneration and mitochondrial dysfunction: genetic and acquired optic neuropathies. Neurochem Int 40:573–584

    Article  CAS  PubMed  Google Scholar 

  • Chinnery PF, Brown DT, Andrews RM, Singh-Kler R, Riordan-Eva P, Lindley J, Applegarth DA, Turnbull DM, Howell N (2001) The mitochondrial ND6 gene is a hot spot for mutations that cause Leber’s hereditary optic neuropathy. Brain 124:209–219

    Article  CAS  PubMed  Google Scholar 

  • Elson JL, Andrews RM, Chinnery PF, Lightowlers RN, Turnbull DM, Howell N (2001) Analysis of European mtDNAs for recombination. Am J Hum Genet 68:145–153

    Google Scholar 

  • Fahy E, Nazarbaghi R, Zomorrodi M, Herrnstadt C, Parker WD, Davies RE, Ghosh SS (1997) Multiplex fluorescence-based primer extension method for quantitative mutation analysis of mitochondrial DNA and its diagnostic application for Alzheimer’s disease. Nucleic Acids Res 25:3102–3109

    Article  CAS  PubMed  Google Scholar 

  • Ghosh SS, Fahy E, Bodis-Wollner I, Sherman J, Howell N (1996) Longitudinal study of heteroplasmic 3460 Leber hereditary optic neuropathy family by multiplexed primer-extension analysis and nucleotide sequencing. Am J Hum Genet 58:325–334

    CAS  PubMed  Google Scholar 

  • Herrnstadt C, Preston G, Andrews RM, Chinnery PF, Lightowlers RN, Turnbull DM, Kubacka I, Howell N (2002) A high frequency of mtDNA polymorphisms in HeLa cell sublines. Mutat Res 501:19–28

    Article  CAS  PubMed  Google Scholar 

  • Holt IJ, Dunbar DR, Jacobs HT (1997) Behaviour of a population of partially duplicated mitochondrial DNA molecules in cell culture: segregation, maintenance and recombination dependent upon nuclear background. Hum Mol Genet 6:1251–1260

    Article  CAS  PubMed  Google Scholar 

  • Howell N (1998) Leber hereditary optic neuropathy: respiratory chain dysfunction and degeneration of the optic nerve. Vision Res 38:1495–1504

    Article  CAS  PubMed  Google Scholar 

  • Howell N, Kubacka I, Halvorson S, Howell B, McCullough DA, Mackey D (1995) Phylogenetic analysis of the mitochondrial genomes from Leber hereditary optic neuropathy pedigrees. Genetics 140:285–302

    CAS  PubMed  Google Scholar 

  • Howell N, Kubacka I, Mackey DA (1996) How rapidly does the human mitochondrial genome evolve? Am J Hum Genet 59:501–509

    CAS  PubMed  Google Scholar 

  • Howell N, Oostra R-J, Bolhuis PA, Spruijt L, Clarke LA, Mackey DA, Preston G, Herrnstadt C (2003a) Sequence analysis of the mitochondrial genomes from Dutch pedigrees with Leber hereditary optic neuropathy. Am J Hum Genet 72:1460–1469

    Article  CAS  PubMed  Google Scholar 

  • Howell N, Smejkal CB, Mackey DA, Chinnery PF, Turnbull DM, Herrnstadt C (2003b) The pedigree rate of sequence divergence in the human mitochondrial genome. There is a difference between phylogenetic and pedigree rates. Am J Hum Genet 72:659–670

    Article  CAS  PubMed  Google Scholar 

  • Kajander OA, Karhunen PJ, Holt IJ, Jacobs HT (2001) Prominent mitochondrial DNA recombination intermediates in human heart muscle. EMBO Rep 2:1007–1012

    Article  CAS  PubMed  Google Scholar 

  • Kraytsberg Y, Schwartz M, Brown TA, Ebralidse K, Kuunz WS, Clayton DA, Vissing J, Khrapko K (2004) Recombination of human mitochondrial DNA. Science 304:981

    Article  CAS  Google Scholar 

  • Man PYW, Griffiths PG, Brown DT, Howell N, Turnbull DM, Chinnery PF (2003) The epidemiology of Leber hereditary optic neuropathy in the north east of England. Am J Hum Genet 72:333–339

    Article  CAS  PubMed  Google Scholar 

  • Sigurðardóttir S, Helgason A, Gulcher JR, Stefansson K, Donnelly P (2000) The mutation rate in the human mtDNA control region. Am J Hum Genet 66:1599–1609

    Article  PubMed  Google Scholar 

Download references

Acknowledgements

We thank the ENG1 LHON family members for their cooperation and assistance and Barbara Howell for her assistance with the manuscript. This study was funded in part by a grant from the Eierman Foundation (Neil Howell) and by a Wellcome Collaboration Grant (Neil Howell, Douglass M. Turnbull, and Patrick F. Chinnery). Patrick F. Chinnery is a Wellcome Senior Fellow in Clinical Science.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Neil Howell.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Howell, N., Kubacka, I., Keers, S.M. et al. Co-segregation and heteroplasmy of two coding-region mtDNA mutations within a matrilineal pedigree. Hum Genet 116, 28–32 (2005). https://doi.org/10.1007/s00439-004-1203-x

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s00439-004-1203-x

Keywords

Navigation