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Comparative map between chicken Chromosome 15 and human chromosomal region 12q24 and 22q11-q12

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Abstract

The physical and comparative map of GGA15 was improved by the construction of 9 BAC contigs around loci previously mapped on GGA15 by linkage analysis. In total, 240 BAC clones were isolated, covering 30–35% of GGA15, and 120 STS were developed (104 STS derived from BAC end sequences and 18 STS derived within genes). Seventeen chicken orthologues of human genes located on human Chr 22q11-q12 were directly mapped within BAC contigs of GGA15. Furthermore, the partial sequences of the chicken BAC clones were compared with sequences present in the EMBL/GenBank databases and revealed matches to 26 genes, ESTs, and genomic clones located on HSA22q11-q12 and HSA12q24. These results provide a better alignment of GGA15 with the corresponding regions in human and mouse, and improve our knowledge of the evolution and dynamics of the vertebrate genome.

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Acknowledgements

This work was financially supported by the Netherlands Technology Foundation (STW; grant WBI.4706). We are grateful to Lesla Bruijnesteijn van Coppenraet for her contribution to the SNP typing.

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Authors and Affiliations

  1. Wageningen Institute of Animal Sciences, Animal Breeding and Genetics Group, Wageningen University, Marijkeweg 40, 6709 PG Wageningen, The Netherlands

    Danyel G. J. Jennen, Richard P. M. A. Crooijmans, Bram Kamps, Rukiye Açar, Jan J. van der Poel & Martien A. M. Groenen

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  1. Danyel G. J. Jennen
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  2. Richard P. M. A. Crooijmans
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  3. Bram Kamps
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  4. Rukiye Açar
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  5. Jan J. van der Poel
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  6. Martien A. M. Groenen
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Correspondence to Danyel G. J. Jennen.

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Jennen, D.G., Crooijmans, R.P., Kamps, B. et al. Comparative map between chicken Chromosome 15 and human chromosomal region 12q24 and 22q11-q12 . Mamm Genome 14, 629–639 (2003). https://doi.org/10.1007/s00335-003-3007-z

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  • DOI: https://doi.org/10.1007/s00335-003-3007-z

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