Genetic Testing Before Anticoagulation? A Systematic Review of Pharmacogenetic Dosing of Warfarin
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- Kangelaris, K.N., Bent, S., Nussbaum, R.L. et al. J GEN INTERN MED (2009) 24: 656. doi:10.1007/s11606-009-0949-1
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Genotype-guided initial warfarin dosing may reduce over-anticoagulation and serious bleeding compared to a one-dose-fits-all dosing method.
The objective of this review was to investigate the safety and efficacy of genotype-guided dosing of warfarin in reducing the occurrence of serious bleeding events and over-anticoagulation.
The authors searched PubMed, EMBASE and International Pharmaceutical Abstracts through January 23, 2009, without language restrictions. Selected articles were randomized trials comparing pharmacogenetic dosing of warfarin versus a “standard” dose control algorithm in adult patients taking warfarin for the first time.
Two reviewers independently extracted data and assessed study quality using a validated instrument. The primary outcomes were major bleeding and time spent within the therapeutic range International Normalized Ratio (INR). Secondary outcomes included minor bleeding, thrombotic events and other measures of anticoagulation quality.
Three of 2,014 studies (423 patients) met the inclusion and exclusion criteria. Differences in study quality, dosing algorithms, length of follow-up and outcome measures limited meta-analysis. Summary estimates revealed no statistically significant difference in bleeding rates or time within the therapeutic range INR. The highest quality study found no significant difference in primary or secondary outcomes, although there was a trend towards more rapid achievement of a stable dose (14.1 vs. 19.6 days, p = 0.07) in the pharmocogenetic arm.
We did not find sufficient evidence to support the use of pharmacogenetics to guide warfarin therapy. Additional clinical trials are needed to define the optimal approach to use warfarin pharmacogenetics in clinical practice.
KEY WORDSwarfarinpharmacogeneticsCYP2C9VKORC1systematic review
In 2007 the Food and Drug Administration (FDA) issued a labeling change advising physicians to consider the use of “genetic tests to improve their initial estimate” of warfarin dose.1 This is the first FDA recommendation to consider genetic testing when initiating a commonly prescribed medication and may set a precedent for the future use of genetic technologies in clinical practice. Many forces are driving this technology into practice with increasing numbers of companies promoting testing,2–4 academic institutions racing to be on the cutting edge of clinical medicine, and patients5 interested in the potential of personalized medicine. Indeed, warfarin has several attributes that make it an attractive “target” of personalized medicine: it is commonly prescribed,6 has a narrow therapeutic index with up to 20-fold inter-individual variability in dose-response,7,8 an annual major bleeding risk of 1–5%9–13 and several common genetic variants that affect warfarin metabolism and activity.14–16
Warfarin dose variability is associated with many factors, including age, height, body weight, race, dietary vitamin K intake, intercurrent illness, drug interactions and genetic variation.17,18 Among Caucasians, an estimated 30% to 40% of warfarin dose variability can be attributed to polymorphisms in genes encoding hepatic isoenzyme cytochrome P-450 2C9 (CYP2C9), which is responsible for metabolic clearance of warfarin, and vitamin K epoxide reductase complex subunit 1 (VKORC1), the enzymatic target of warfarin.8,14,15,19–28
Allelic variants in CYP2C9 and VKORC1 are common, with more than two thirds of the Caucasian population and up to 90% of East Asians manifesting at least one variant.14–16 Affected individuals require, on average, lower doses of warfarin to maintain a therapeutic INR and more time to achieve stable dosing.15,19,21,23,29–31 Carriers of variant alleles are at higher risk for bleeding complications, particularly at the induction of warfarin therapy,32–37 and genotype-guided dosing algorithms better approximate maintenance warfarin dose than fixed-dose algorithms.15,32,38–43 However, a recent analysis by Eckman and colleagues concluded that genotype-guided dosing was unlikely to be cost-effective in nonvalvular atrial fibrillation patients.44 Furthermore, it remains unclear whether pharmacogenetic dosing will reduce the incidence of serious bleeding or over-anticoagulation compared to current methods of initiating and dose-adjusting warfarin.
In order to summarize the current evidence supporting the use of warfarin pharmacogenetics, we performed a systematic review of randomized trials that compared a dose-selection strategy that used pharmacogenetic information to one that did not.
We searched PubMed, EMBASE and the International Pharmaceutical Abstracts through January 23, 2009. The complete search strategy is described in the online Appendix 1. In order to identify ongoing clinical trials, we searched http://www.clinicaltrials.gov on February 19, 2009 (online Appendix 1). We examined the reference lists of included articles and professional reviews, and contacted experts to identify other potentially relevant studies.
We included randomized controlled trials that compared clinical outcomes among a pharmacogenetic dosing group, using common genetic variants of CYP2C9 and/or VKORC1, to a dosing algorithm that did not incorporate genetic testing. Eligible studies enrolled adult, warfarin-naïve patients with any indication for warfarin therapy, including atrial fibrillation, venous thromboembolic disease, recent orthopedic surgery and valvular disease.
Two reviewers (KK, JT) independently extracted data using a data abstraction instrument: number of participants in each arm, study quality, length of follow-up period, intervention and control dosing algorithms, and primary and secondary outcomes. Our primary outcomes of interest were the incidence of major bleeding events and time spent in therapeutic range (INR between 2–3) as calculated by the linear interpolation method,45 an accepted measure of anticoagulation quality and a potential surrogate for bleeding risk.9,11 Our secondary outcomes of interest included incidence of minor bleeding and thromboembolism, and measures of over-anticoagulation and inadequate anti-coagulation, including: time to first therapeutic INR, time to stable warfarin dose, percentage time INR greater than 3 or 4, and relative number of INR blood draws. We resolved all disagreements by discussion and consensus. We contacted the authors of the studies for additional information.
We used standard definitions for several outcomes. Major bleeding was categorized according to an international consensus statement46 as any of the following: fatal bleeding, symptomatic bleeding in a critical area or organ, a fall of hemoglobin greater than or equal to 2 mg/dl, or requirement of transfusion of two or more units of red cells or whole blood. For one study,47 we categorized gastrointestinal bleeds as major bleeds because we were unable to ascertain the severity of events reported. Percentage time in therapeutic range INR was defined between 2 and 3 unless otherwise stated. Time to stable warfarin dose was defined as two consecutive, therapeutic INR values separated by at least 7 days without intervening dose alteration.48
Study quality was assessed using the Jadad scale.49 The score ranged from 0 to 5 with higher scores indicating higher quality.1 We further characterized study quality with assessment of: allocation concealment, comparability of baseline groups, equivalency of loss to follow-up, similarity of co-interventions and whether the analysis was intention to treat.
Data Synthesis and Statistical Analysis
Quantitative data synthesis was performed using STATA version 10 (STATA Corp, College Station, TX). Meta-analysis was performed on primary outcomes. The principal measures of effect size between the intervention and control arms were risk ratio for major bleeding, and the standardized mean difference (SMD) for percentage time INR within therapeutic range (online Appendix 2). In one case,48 we used a weighted average of the percentage time within therapeutic range from both the initiation (first 8 days) and stabilization period (day 9 through stable dose), because only separate estimates were reported in the study. We used a random effects model50 to combine results across studies when appropriate and assessed heterogeneity with the Q statistic51 and I2.52–54 In order to test for publication bias, we used the Begg adjusted rank correlation test and the Egger regression asymmetry test.55,56 Pre-specified subgroups for sensitivity analyses included the quality of the trials (poor versus good/excellent) and the length of follow-up (< 30 days versus ≥ 30). Sensitivity analysis by genes used in the prediction model was not performed because there were too few studies for it to be meaningful.
Study Characteristics in the Randomized Trials of Genotype-Guided Warfarin Dosing
Mean follow-up, days
Mean daily starting dose, mg
Algorithm constructed de novo48
DAWN AC computer algorithm72
Carlquist regression equation73‡
10 mg × 2 days, then 5 mg74
Patient Characteristics in the Randomized Trials of Genotype-Guided Warfarin Dosing
Each of the three studies used different dosing models for their pharmacogenetic and control dosing arms, which is reflected in the differing average initial doses across the three studies in both groups (Table 1). For the pharmacogenetic arm, the studies by Hillman et al.47 and Caraco et al.48 used dosing models that accounted only for CYP2C9 variants, while Anderson et al.57 incorporated both CYP2C9 and VKORC1 variants. Two of the pharmacogenetic algorithms47–57 were previously validated and adjusted for covariates of age, sex and weight. In contrast, Caraco et al.48 created a new algorithm that estimated warfarin dose based only on CYP2C9 genotype and amiodarone use.
All three studies evaluated outcomes of bleeding and time within therapeutic range. No study reported active surveillance for clinical adverse events of bleeding or venous or arterial thromboembolism.
Quality Assessment of the Randomized Trials of Genotype-Guided Warfarin Dosing
The two remaining studies were of good quality overall. Hillman et al.47 received a Jadad score of 3 due to single-blinded design. Anderson et al.57 received the highest Jadad score (5). However, despite adequate randomization in the Anderson study,57 there was a significantly higher percentage of patients with ≥1 variant allele in CYP2C9 or VKORC1 among the control group compared to the pharmacogenetics group (p < 0.01, Table 2).
Primary and Secondary Outcomes in the Randomized Trials of Genotype-Guided Warfarin Dosing
Major bleeds N (%)
% Time INR in range
Minor bleeds N (%)
VTE N (%)
Time to first thera-peutic INR, days
Time to stable warfarin dose, days
Mean N INR draws
Overall, there were few consistent trends showing a difference in secondary outcomes between the groups. Caraco et al.48 reported an advantage for pharmacogenetic dosing compared to the control group for several outcomes (Table 4), including lower cumulative incidence of minor bleeding, decreased time to first therapeutic INR, decreased time to stable warfarin dose, decreased total number of INR draws and fewer days of INR >3 (1.77 vs. 6.58, p < 0.001). However, the longer follow-up time in the control arm complicates the interpretation of time-dependent results, including the number of bleeding events, total number of INR draws and days of supratherapeutic INR. It is noteworthy that the Hillman47 and Anderson57 studies did not replicate these findings. No study showed a difference in thromboembolism incidence.
The pharmacogenetic dosing groups showed improvement in time to stable warfarin dose compared to the control groups (Table 4) in two of the three studies48,57 and was not reported in the third.47 Among the studies reporting this outcome, the pharmacogenetic arm was favored with statistically significant results by Caraco et al.48 and near statistical significance by Anderson and colleagues (14.1 versus 19.6 days, p = 0.07).57 The longer follow-up in the control arm of the Caraco48 study did not affect this result.
Ongoing Clinical Trials
Ongoing Randomized Trials Comparing Pharmacogenetic Warfarin Dosing to a Control-Dosing Algorithm Among Patients Starting Warfarin Therapy
Title/clinical trials identifier
Modeling genotype and other factors to enhance the safety of coumadin prescribing/NCT00484640
1°: PTTR, deviation from optimal dose
2°: time to stable dose, time to INR >4, adverse events
Genetic determinants of warfarin anticoagulation effect/NCT00162435
Israel/Hadassah Medical Organization
Time to therapeutic INR, PTTR, bleeding events
Comparison of warfarin dosing using decision model versus pharmacogenetic algorithm/NCT00511173
Clinical outcomes, NOS
Clarification of optimal anticoagulation through genetics (COAG) /NCT00839657
US - Multi-center/NHLBI
2°: time to stable dose
Prospective genotyping for total hip or knee replacement patients receiving warfarin (coumadin)/NCT00634907
US/University of Utah
1°: Adverse events
2°: Improved anticoagulation management
Our study found little randomized trial data available to support the hypothesis that pharmacogenetic dosing at the onset of warfarin therapy reduces major bleeding events. An extensive search yielded only three small randomized trials evaluating pharmacogenetic dosing, and among these, there was significant variability in terms of design quality, length of follow-up, intervention and outcome measures. No study had adequate power to evaluate differences in major bleeding rates between groups. In the pooled estimates, there was a trend towards less bleeding with pharmacogenetic dosing, but this should be interpreted with caution because of the differences in design between studies. Percentage time within therapeutic range varied significantly across the studies even with standardized INR range and more uniform follow-up time. This disparity raises concern that methods of ascertainment of this outcome are likely to have differed between studies. There was some evidence that time to stable warfarin dose may be decreased with genotype-guided dosing.
The study by Anderson el al.57 is the highest quality trial published to date, and the only study that incorporated both VKORC1 and CYP2C9. It is notable that there were more variant alleles in the standard dosing arm compared to pharmacogenetic arm of this study.57 Because patients with variant alleles are known to be more likely to have out of range INR and bleeding complications, this difference could have biased the results in favor of the pharmacogenetic arm. Indeed, some outcome estimates in this trial favored pharmacogenetic dosing, but none achieved statistical significance.
Only the Caraco study48 showed statistically significant improvement in nearly all surrogate outcomes with pharmacogenetic dosing. However, the lack of true randomization and allocation concealment, the high loss to follow-up, the lack of intention to treat analysis and the different lengths of follow-up between groups challenge the internal validity of these results. Specifically, the outcomes of total number of bleeding events, percentage time INR in therapeutic range, days of supratherapeutic INR and total number of INR draws are invalidated on the basis of detection bias as a result of the nearly two-fold increased follow-up time for the control group. As an example, the total number of INR draws was 36% higher in the control group, but the average interval between consecutive INR draws was the same between groups.
Both the Hillman47 and Anderson57 studies used a multivariable algorithm to select the initial dose for the patients in the intervention arm, taking into account not only the contribution of genetic variation, but also other well-established factors that are known to affect overall warfarin dose such as age, sex and weight. In contrast, patients in the control arms of these two studies47,57 all received the same initial dose. Despite this seemingly unfair advantage at the outset, neither of these studies demonstrated statistically significant improvement of outcomes for the pharmacogenetic arm.
Is pharmacogenetic dosing of warfarin more safe and effective than a one-size-fits all strategy followed by careful INR monitoring? The results of our study demonstrate that we still do not know. An uncontrolled study 59 evaluating a CYP2C9 dosing algorithm 40 in patients initiating warfarin further highlights this uncertainty. Although the algorithm estimated the maintenance warfarin dose well (R2 = 0.42, p < 0.001), carriers of variant CYP2C9 alleles continued to have a significantly increased risk of INR >4 (HR 4.6, p < 0.01) compared to those with the wild-type allele. There is evidence that the greatest risk of warfarin-induced adverse events is at the induction of warfarin therapy,60 and that INR levels prior to day 4 of therapy do not predict dose response differences. Thus, the traditional “trial and error” method may result in delays in estimating the appropriate dose.41 However, Li and colleagues61 recently found that CYP2C9 and VKORC1 genotypes did not add to early INR response as a predictor of warfarin sensitivity. Even if pharmacogenetic dosing does not reduce major bleeding, it may still be useful and cost effective if it results in shorter time to stable dose, and fewer blood draws to attain stable INR. It is possible, however, that physicians may become more complacent with pharmacogenetic dosing resulting in reduced surveillance and a paradoxical increase in bleeding during the initiation of warfarin therapy.
Our study has limitations. First, very little high-quality evidence has been published in this area: we identified only three small randomized trials evaluating pharmacogenetic dosing of warfarin. Second, important differences in designs, outcome definitions and follow-up intervals used by these three trials reduced the degree to which we could pool their individual findings. We did not perform meta-analysis of secondary outcomes because of significant heterogeneity of the trials. Third, we did not evaluate genotype-specific outcomes, because these are not relevant when providers are unaware of genotypes in advance. Lastly, we did not include the three prospective cohort studies using genotype-guided algorithms,59,62,63 because others have reviewed this literature,64,65 and we decided a priori that only randomized trials could reliably demonstrate whether pharmacogenetic dosing improves patient outcomes. It may be considered early to perform a systematic review on a topic where so few randomized controlled trials are available; however, given the FDA relabeling, we feel it is important to evaluate the current evidence.
The package insert of warfarin advises that “lower initiation doses should be considered for patients with certain genetic variations in CYP2C9 and VKORC1 enzymes.” This FDA labeling change was made on the basis of accumulation of data66 demonstrating that allelic variants in CYP2C9 and VKORC1 are associated with increased plasma warfarin levels, out of range INR and increased bleeding risk.15,19,23,35,67,68 However, as our study demonstrates, there is no evidence that a more accurate initiation dose reduces the risk of bleeding. Results from ongoing clinical trials will help to clarify the role of genetic testing in warfarin management. A target enrollment of at least 2,000 patients has been suggested,57 and currently the cumulative experience of >2,500 patients is anticipated.
Each of the randomized trials reviewed in our study used different pharmacogenetic and control group dosing algorithms. The most comprehensive and widely available pharmacogenomic algorithm, http://www.WarfarinDosing.org, has been recently validated by the The International Warfarin Pharmacogenetics Consortium and will be used in the largest randomized trial sponsored by the NHLBI.38 Until recently, however, there was no widely accepted pharmacogenetic algorithm to guide the initiation of warfarin therapy, and new models are still being developed and validated.69 Although warfarin dosing algorithms do not eliminate the need for frequent INR monitoring and dose titration, these algorithms can, even in the absence of genotype information, provide a very good estimate of the patient’s warfarin dose by taking into account readily available information such as age, gender, weight and smoking status.38 Whether these algorithms improve outcomes compared to other warfarin initiation strategies is not known.
The products of genetic discovery are becoming increasingly relevant to the practice of clinical medicine, particularly in the realm of pharmacogenetics. Genotype-guided warfarin prescribing is currently the focus of much attention and is positioned to set a precedent for how integration of genetic technologies in clinical practice will proceed. In the case of warfarin, it seems intuitive that adjusting warfarin dose to match patients’ genetic makeup will result in fewer complications; however, our review, along with at least one unfavorable cost-effectiveness analysis,44 demonstrates that additional clinical trial data are needed prior to endorsing a new standard of care for warfarin dosing.
In conclusion, our study did not find sufficient evidence to support the use of pharmacogenetics to guide warfarin therapy outside of clinical trials at this time. Small sample sizes and heterogeneity across the few available studies precluded definitive estimates of the relative effectiveness of this intervention. We recommend that policy makers and clinicians await the results of larger, high quality randomized trials and better cost-effectiveness analyses before adopting genetic testing as the standard of care for warfarin initiation.
The Jadad score rates randomized controlled trials on a 0–5 scale where a higher score indicates higher quality and gives 1 point for each of the following: (1) the study was described as randomized, (2) the randomization technique was described and appropriate, (3) the study was described as double-blind, (4) the method of double-blinding was described and was appropriate, and (5) withdrawals and reasons for withdrawals were given.
The authors are indebted to Gloria Won from the Fishbon Memorial Library for her expertise and efforts in creating a highly sensitive search strategy. We express our appreciation to Benjamin Horne and Jeffery Anderson for providing us additional data from their study. At the time the review was conducted Dr. Kangelaris was supported by the National Research Service Award Institutional Grant (T32 HP19025).
Conflict of Interest