Abstract
Soil-borne diseases are the most significant crop protection problem in soil-based, low-input and especially organic glasshouse production systems in Europe. While chemical soil disinfestation has been the control method of choice in conventional farming systems, soil steaming has been the main strategy for the control of soil-borne diseases in organic production. Both methods are extremely expensive and have been increasingly restricted for environmental reasons by governments, and integrated and organic farming standard-setting bodies. The use of disease-tolerant varieties, grafting onto resistant rootstocks and chitin soil amendments were evaluated as potential replacements for soil steaming in organic and other low-input tomato production systems. When only Pyrenochaeta lycopersici and/or Meloidogyne spp. were present in soil, grafting and/or chitin soil amendment were found to be as effective in reducing root disease and/or increasing yield as soil steaming, but the efficacy of both treatments was reduced when Verticillum albo-atrum was also present in soil. No additive effects of combining grafting and chitin soil amendments could be detected. A more widespread use of grafting and/or chitin soil amendments may therefore allow significant reductions in the use of steam and chemical soil disinfestation in glasshouse crops. It will also allow integrated and organic farming standard-setting bodies to impose further restrictions on the use of soil disinfestation treatments.
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Abbasi, P. A., Al-Dahmani, J., Sahin, F., Hoitink, H. A. J., & Miller, S. A. (2002). Effect of compost amendments on disease severity and yield of tomato in conventional and organic production systems. Plant Disease, 86, 156–161.
Atherton, J. G., & Rudich, J. (1986). The tomato crop: A scientific basis for improvement. London: Chapman and Hall.
Barber, M. S., Bertram, R. E., & Ride, J. P. (1989). Chitin oligosaccharides elicit lignification in wounded wheat leaves. Physiological and Molecular Plant Pathology, 34, 3–12.
Beckman, C. H., & Talboys, P. W. (1981). Anatomy of resistance. In M. E. Mace, A. A. Bell, & C. H. Beckman (Eds.), Fungal wilt diseases of plants (pp. 487–521). New York: Academic.
Benhamou, N., Kloepper, J. W., & Tuzun, S. (1998). Induction of resistance against Fusarium wilt of tomato by combination of chitosan with endophytic bacteria strain: Ultrastructure and cytochemistry of the host response. Planta, 204, 153–168.
Bennett, A. J., Leifert, C., & Whipps, J. M. (2003). Survival of the biocontrol agents Coniothyrium minitans and Bacillus subtilis MBI 600 introduced into pasteurised, sterilised and non-sterile soils. Soil Biology and Biochemistry, 35, 1565–1573.
Campbell, R. N., Schweer, V. H., & Hall, D. H. (1982). Corky root of tomato in California caused by pyrenochαetα lycopersici and control by soil fumigation. Plant Disease, 66, 657–661.
Cascone, G., D'Emilio, A., Polizzi, G., Grillo, R. (2000). Effectiveness of greenhouse soil solarization with different plastic mulches in controlling corky root and root-knot on tomato plants. Acta Horticulturae, 145–150.
Ciccarese, F., & Cirulli, M. (1983). Comportamento di cultivar e linee di pomodor verso la suberosita radicale. Informatore Fitopatologico, 33, 57–59.
Cirulli, M. (1968). Ricerca di fonti di resistenza verso tre malattie del pomodoro in specie di Lycopersicon. Annals of Faculty of the Agricultural University of Bari, 22.
Crawley, M. J. (2007). The R book. Chichester: Wiley.
De Boer, W., Gerards, S., Klein Gunnewiek, P. J. A., & Modderman, R. (1999). Response of the chitinolytic microbial community to chitin amendments of dune soils. Biology and Fertility of Soils, 29, 170–171.
Di Vito, M., Lamberti, F., & Carella, A. (1979). La resistenza del pomodoro nei confronti dei nematodi galligeni: Prospettive e possibilità. Rivista di Agronomia, 13, 313–322.
Drinkwater, L. E., Letourneau, D. K., Workneh, F., Vanbruggen, A. H. C., & Shennan, C. (1995). Fundamental differences between conventional and organic tomato agroecosystems in California. Ecological Applications, 5, 1098–1112.
Ebben, M. H., Smith, J. W. M., & Turner, E. A. (1978). Tolerance of tomatoes to Pyrenochaeta lycopersici: Comparison of a tolerant line with a susceptible cultivar in infested soils. Plant Pathology, 27, 91–96.
Ellis, S. (2002). The use of chitin in sugar beet. British Sugar Beet Review, 68, 12–17.
Giotis, H., Markelou, E., Theodoropoulou, A., Toufexi, E., Hodson, R., Shotton, P., Shiel, R., Cooper, J., & Leifert, C. (2009). Effect of soil amendments and biological control agents on soil borne root diseases caused by Pyrenochaeta lycopersici and Verticillum albo-atrum in organic greenhouse tomoato production systems. European Journal of Plant Pathology, 123, 387–400.
Giotis, H., Toufexi, E., Theodoropoulou, A., Dafermos, N. E. M., Kasselaki, A. N. M., & Leifert, C. (2006). Effect of soil steaming, amendments and resistant rootstocks on soil borne disease incidence and yields and in organic tomato production systems. Aspects of Applied Biology, 80, 127–133.
Granges, A., & Leger, A. (1996). Comparison between tomato plants grafted with one or two stems and with soil steaming in the glasshouse. Revue Suisse de Viticulture, d’Arboriculture et d’Horticulture, 28, 389–392.
Gravel, V., Blok, W., Hallmann, E., Carmona-Torres, C., Wang, H. Y., Van de Peppel, A., Golec, A. F. C., Dorais, M., Van Meeterens, U., Heuvelink, E., Rembialkowska, E., & Van Bruggen, A. H. C. (2010). Differences in N uptake and fruit quality between organically and conventionally grown greenhouse tomatoes. Agronomy for Sustainable Development, 30, 797–806.
Grove, G. G., & Campbell, R. N. (1987). Host range and surνiνal in soil of pyrenochαetα lycopersici. Plant Disease, 71, 806–809.
Hoggenboom, N. G. (1970). Inheritance of resistance to corky root rot in tomato (Lycopersicon esculelentym Mill). Euphytica, 19, 413–425.
Lampkin, N. H., & Measures, M. (2001). Organic farm management handbook (4th ed.). Aberystwyth: Welsh Institute of Rural Studies, University of Wales.
Lemaire, J. Μ., Lot, Η., BIancard, D., Lecoq, Η. (1998). Diseases in protected crops–relations with integrated crop protection, EUR Report.RepoR.ΕUR 9386Ε (pp. 134–137).
Lyon, G. D., Reglinski, T., & Newton, C. (1995). Novel disease control compounds: The potential to ‘immunize’ plants against infection. Plant Pathology, 44, 407–427.
Manjula, K., & Podile, A. R. (2001). Chitin-supplemented formulations improve biocontrol and plant growth promoting efficiency of Bacillus subtilis AF 1. Canadian Journal of Microbiology, 47, 618–625.
Mazollier, C. (1999). Grafting of tomatoes under protected cultivation. PHM Revue Horticole, 404, 44–48.
Minuto, A., Gullino, M. L., Lamberti, F., D'Addabbo, T., Tescari, E., Ajwa, H., & Garibaldi, A. (2006). Application of an emulsifiable mixture of 1,3-dichloropropene and chloropicrin against root knot nematodes and soilborne fungi for greenhouse tomatoes in Italy. Crop Protection, 25, 1244–1252.
Morra, L., Correale, A., Bilotto, M., & Restaino, F. (1997). Evaluation of three rootstocks for greenhouse tomatoes. Colture Protette, 26, 69–73.
Patternotte, S. J., & Van Kestern, H. A. (1993). A new agressive strain of Verticillium albo-atrum in Verticillium resistant cultivars of tomato in The Netherlands. Netherlands Journal of Plant Pathology, 99, 169–172.
Pegg, G. F., & Brady, B. L. (2002). Verticillium wilts. Oxford: CABI Publishing.
Pinheiro, J. C., & Bates, D. M. (2000). Mixed-effects models in S and S-plus. New York: Springer.
R Development Core Team (2006). R: A language and environment for statistical computing. http://www.R-project.org. Accessed 01 July 2012.
Reddy, Μ. V. Β., Arul, Ι., Angers, Ρ., & Couture, L. (1999). Chitosan treatment of wheat seeds induces resistance to Fusαrium grαmineαrum and improves seed quality. Journal of Agriculture and Food Chemistry, 47, 1208–1216.
Scheffer, R. P. (1997). The nature οf disease in plants. Cambridge: Cambridge University Press.
Shishkoff, N., & Campbell, R. N. (1990). Survival of Pyrenochaeta lycopersici and the influence of temperature and cultivar resistance on the development of corky root of tomato. Plant Disease, 74, 889–894.
Sink, K., & Grey, W. (1999). Α root-injection method to assess verticillium wilt resistance of peppermint (Mentha χ piperita L.) and its use in identifying resistant somaclones οf cv. Black Mitcham. Euphitica, 106, 223–230.
Song, H. J., Grant, I., Rotondo, D., Mohede, I., Sattar, N., Heys, S. D., & Wahle, K. W. J. (2005). Effect of CLA supplementation on immune function in young healthy volunteers. European Journal of Clinical Nutrition, 59, 508–517.
Tang, S. C., Chang, M. C., & Cheng, C. Y. (1998). Use of colloid chitin and diatomaceous earth in continuous cake-filtration fermentation to produce creatinase. Process Biochemistry, 33, 519–526.
Termohlen, I. G. P. (1962). Onderzoekingen over kurkwortel van tomaat en over de kurkwortelschimmel. Tijdschr. Plantenziekten, 68, 295–367.
Tjamos, E. C., & Smith, I. M. (1975). The expression of resistance to Verticillium albo-atrum in monogenically resistant tomato varieties. Physiological Plant Pathology, 6, 215–225.
Vakalounakis, D., & Fragiadakis, G. (2003). Phytopathoveltiosi. Heraclion: Typocreta.
van Loenen, M. C. A., Turbett, Y., Mullins, C. E., Feilden, N. E. H., Wilson, M. J., Leifert, C., & Seel, W. E. (2003). Low temperature-short duration steaming of soil kills soil-borne pathogens, nematode pests and weeds. European Journal of Plant Pathology, 109, 993–1002.
Williamson, V. M., & Hussey, R. S. (1996). Nematode pathogenesis and resistance in plants. The Plant Cell, 8, 1735–1745.
Acknowledgments
The authors are grateful for funding from the European Community financial participation under the Sixth Framework Programme for Research, Technological Development and Demonstration Activities for the Integrated Project QUALITYLOWINPUTFOOD, FP6-FOOD-CT-2003- 506358. Financial and technical support from Cantelo Nursery Ltd. (Somerset, UK), Theodoropoulos farms (Nafpaktos, Greece), Giotis farms (Ioannina, Greece) and Geokomi plc (Sivas, Crete, Greece) is also gratefully acknowledged.
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Giotis, C., Theodoropoulou, A., Cooper, J. et al. Effect of variety choice, resistant rootstocks and chitin soil amendments on soil-borne diseases in soil-based, protected tomato production systems. Eur J Plant Pathol 134, 605–617 (2012). https://doi.org/10.1007/s10658-012-0041-2
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DOI: https://doi.org/10.1007/s10658-012-0041-2