Coral Reefs

, Volume 27, Issue 4, pp 837–850

Effects of suspended sediments, dissolved inorganic nutrients and salinity on fertilisation and embryo development in the coral Acropora millepora (Ehrenberg, 1834)

  • C. Humphrey
  • M. Weber
  • C. Lott
  • T. Cooper
  • K. Fabricius
Open AccessReport

DOI: 10.1007/s00338-008-0408-1

Cite this article as:
Humphrey, C., Weber, M., Lott, C. et al. Coral Reefs (2008) 27: 837. doi:10.1007/s00338-008-0408-1


Exposure of coral reefs to river plumes carrying increasing loads of nutrients and sediments is a pressing issue for coral reefs around the world including the Great Barrier Reef (GBR). Laboratory experiments were conducted to investigate the effects of changes in inorganic nutrients (nitrate, ammonium and phosphate), salinity and various types of suspended sediments in isolation and in combination on rates of fertilisation and early embryonic development of the scleractinian coral Acropora millepora. Dose–response experiments showed that fertilisation declined significantly with increasing sediments and decreasing salinity, while inorganic nutrients at up to 20 μM nitrate or ammonium and 4 μM phosphate had no significant effect on fertilisation. Suspended sediments of ≥100 mg l−1 and salinity of 30 ppt reduced fertilisation by >50%. Developmental abnormality occurred in 100% of embryos at 30 ppt salinity, and no fertilisation occurred at ≤28 ppt. Another experiment tested interactions between sediment, salinity and nutrients and showed that fertilisation was significantly reduced when nutrients and low concentrations of sediments co-occurred, although both on their own had no effect on fertilisation rates. Similarly, while slightly reduced salinity on its own had no effect, fertilisation was reduced when it coincided with elevated levels of sediments or nutrients. Both these interactions were synergistic. A third experiment showed that sediments with different geophysical and nutrient properties had differential effects on fertilisation, possibly related to sediment and nutrient properties. The findings highlight the complex nature of the effects of changing water quality on coral health, particularly stressing the significance of water quality during coral spawning time.


Great Barrier ReefCoral fertilisationSalinitySedimentNutrientsTerrestrial runoff


One of the most pressing concerns for the management of the Great Barrier Reef (GBR) is to understand the consequences of increasing terrestrial runoff of nutrients and sediments (Hutchings and Haynes 2005; Hutchings et al. 2005). Nearshore reefs of the GBR have developed in an environment driven by the influence of river runoff, yet in the past 150 years, expanding agriculture, urban development and industry have led to greater runoff of freshwater (McCulloch et al. 2003), nutrients (Devlin et al. 2001; Furnas 2003), sediments (Neil et al. 2002; Furnas 2003; McCulloch et al. 2003), and agrochemicals (Haynes and Johnson 2000; Haynes and Michalek-Wagner 2000). River plume waters are characterised by elevated levels of dissolved organic and inorganic nitrogen and phosphorus, suspended particulate matter, turbidity, and chlorophyll a, as well as by reduced salinity, when compared with ambient marine coastal waters (Table 1). Generally, flood plumes in this region remain within 20 km of the coast due to prevailing south-easterly winds and Coriolis forcing (Chao 1988), impinging upon the approximately 900 nearshore reefs (~27% of all reefs) within the GBR Marine Park. In the absence of strong south-easterly winds, flood plumes may extend to some of the mid- and outer-shelf reefs of the GBR (Devlin and Brodie 2005).
Table 1

Water quality parameters of flood plumes of the Great Barrier Reef compared to ambient values











Chl a




(μg l−1)

(mg l−1)

Flood plumea












Ambient (non-flood)b












Salinities are minimum values recorded while all other values are maximum values

aDevlin et al. (2001), values recorded in flood plumes on the GBR between 1991 and 1999

bFurnas (2003), median values from inshore waters of the Central GBR

cWolanski et al. (2008)

Some reefs in the northern wet tropical section of the GBR (Herbert to Daintree Rivers) are exposed to floods nearly annually. Reefs in the southern, central and far northern sections are characterised by dryer subtropical to tropical climates with fewer floods (on average every 2–3 years; Devlin and Brodie 2005). The majority of river floods occur in the monsoonal wet season (October to April), often associated with tropical cyclones or rain depressions (Devlin et al. 2001). Although average rainfall is highest in January to March, early floods can coincide with the coral mass spawning event in the GBR that occurs annually in October to December (Babcock et al. 1986).

The residency time of dissolved materials in the GBR has been estimated to be up to 300 days (disregarding biological uptake; Luick et al. 2007), while particulate materials remain for an unknown period whilst undergoing cycles of wind-driven re-suspension and deposition until they are finally deposited in deeper water or in north-facing bays. Terrestrial runoff therefore not only affects biological processes during acute flood events but can also chronically alter water quality near inshore reefs year-round.

The reproductive processes and early life history stages of corals, including fertilisation, embryonic development, metamorphosis and settlement, are sensitive to changes in water quality (Fabricius 2005). Successful coral reproduction is critical for the resilience of coral reefs, determining the speed of recovery after disturbance. Several investigators have studied the effects of individual water quality parameters on coral reproduction. In particular, exposure to increased levels of nitrogen and phosphorus resulted in reduced fertilisation rates and increased levels of developmental abnormalities in Acropora longicyathus (Harrison and Ward 2001), as well as the production of smaller and fewer eggs per polyp in A. longicyathus and Acropora aspera (Ward and Harrison 2000). Enhanced ammonium has also been shown to reduce larval survival and settlement in Diploria strigosa with more pronounced reductions at higher temperatures (Bassim and Sammarco 2003). Reduction in salinity from 35 to 28 ppt reduced fertilisation success in Acropora digitifera from 86% to 25%, with a further 50% reduction in development to actively swimming planulae larvae (Richmond 1993). Suspended sediments of 50–100 mg l−1 have also been shown to reduce fertilisation rates, larval survival and larval settlement in Acropora digitifera (Gilmour 1999).

Understanding the effects of changes in water quality on coral reproduction is complicated by the fact that high nutrients often co-occur with reduced salinity and increased levels of suspended sediments. Few studies have examined these interactive effects between water quality parameters on coral reproduction. One of the few studies to investigate interactions in water quality parameters on corals is that of Bassim and Sammarco (2003) who showed that the effects of temperature and ammonium were additive in reducing survivorship, ciliary activity and settlement rates of larvae of the coral Diploria strigosa. Another study showed that the effects of sedimentation on adult corals depended upon the physical and chemical properties of the sediments, as nutrient-rich sediments exerted greater photo-physiological stress on corals than nutrient-poor sediments (Weber et al. 2006). The effects of sedimentation on the photo-physiology of reef-inhabiting crustose coralline algae were also substantially exacerbated by the presence of trace concentrations of the herbicide diuron (Harrington et al. 2005).

This study investigates the synergistic effects of varying but environmentally relevant levels of suspended sediments, salinity and dissolved inorganic nitrogen (as nitrate and ammonium) and phosphorus on fertilisation and embryonic development in the coral Acropora millepora. The effects of five contrasting sediment types on coral fertilisation and development were also compared, to better understand how sediment properties determine reproductive impairment. The results help to better understand the effects of increased terrestrial runoff and changes in water quality on coral reproduction and resilience on coral reef systems that are within the reach of river flood plumes and seafloor resuspension on the GBR.

Materials and methods

Spawning and gamete collection

The broadcast-spawning coral Acropora millepora (Ehrenberg, 1834), abundant in nearshore waters of the GBR, was selected as the study species. Eleven gravid colonies (each ~30 × 30 cm) were collected from Davies Reef, GBR (18°50′ S, 147°38′ E), from a depth of 5–8 m on 28 Nov. 2004. They were transported to aquarium facilities at the Australian Institute of Marine Science and maintained outdoors in 27–29°C temperature-controlled, flow-through seawater tanks until spawning commenced.

Prior to sunset, colonies were isolated in 50 l plastic containers and shielded from artificial light. Synchronous spawning occurred in 8 of the 11 colonies between 2100 and 2200 h on 1 Dec. 4 days after the full moon. The released gametes were collected following the methods of Negri and Heyward (2000). Briefly, the floating egg–sperm bundles from individual colonies were collected from the water surface by gentle suction through a plastic tube into 250 ml plastic containers. Gametes from each colony were kept separate to prevent fertilisation until the experiments were ready to proceed. Gametes in the plastic jars were gently agitated to separate the eggs and sperm, and passed through a 150 μm plankton mesh to retain all eggs and collect the concentrated sperm in a glass beaker. The eggs thus retained on the mesh were washed five times with sperm-free seawater to remove residual sperm. Eggs from all colonies that had spawned were pooled, as was the concentrated sperm.

The sperm concentration in the stock solution was determined with a haemocytometer viewed with a compound microscope at 400× magnification. Sperm concentration was diluted with sperm-free seawater to achieve a working stock of ~1.4 × 107 cells ml−1. The concentrations of the egg and sperm slurries were adjusted to obtain ~100–500 eggs and a sperm concentration of ~2 × 106 sperm ml−1 per treatment chamber. This concentration has been found to be slightly suboptimal for fertilisation, thereby increasing the sensitivity of the assay (Harrison and Ward 2001). Gamete-free seawater treatments with varying concentrations of dissolved inorganic nutrients, various types of sediments and/or freshwater (see below) were made up a few hours prior to spawning in 70 ml plastic jars. To each of five replicate jars holding 20 ml of modified seawater per treatment, 5 ml of egg solution was added, and 5 ml of sperm was added to another set of five plastic jars per treatment. Gametes remained in separate jars for 30 min before the eggs and sperm from the appropriate treatments were combined, resulting in a final gamete and seawater volume of 50 ml per chamber. The 30 min pre-fertilisation exposure period simulated the time required for sperm to find and appropriate eggs in the field, and reflecting the time required for polar body extrusion in acroporid gametes (Babcock and Heyward 1986). Chambers were sealed and then placed in a flow-through seawater bath to maintain a constant ambient temperature during fertilisation and development. At 10 min intervals all chambers were gently agitated to keep the sediment in suspension.

Development was terminated after 3 h by adding to each jar 2 ml of Bouin’s preservative (75 ml saturated aqueous picric acid, 25 ml concentrated formalin, 5 ml glacial acetic acid), which preserved embryo integrity. Three aliquots of fertilised eggs were then collected with a wide bore pipette, placed on glass well-slides, and photographed for later analysis of rates of fertilisation, abnormal and normal development (both expressed as a percentage of fertilised eggs). Coral embryos undergo radial holoblastic cleavage with regular cleavage up to the eight cell stage which generally occurs within 3–8 h (Hayashibara et al. 1997; Ball et al. 2002; Okubu and Motokawa 2007). Aberrant development was characterised as deviation from this pattern of division, generally resulting in irregularly shaped blastomeres.

Treatment types

Three experiments were conducted. Experiment 1 investigated the main effects of gamete exposure to increasing concentrations of suspended sediments, salinity, and dissolved inorganic nitrogen and phosphate. Experiment 2 investigated the combined effects of suspended sediment, salinity and nutrients, to assess potential interactions. Experiment 3 investigated main effects of increasing concentrations of five different types of sediments. Concentrations for all the treatments were within the range of those measured on nearshore reefs of the GBR during flood events (Devlin et al. 2001).

Experiment 1: response curves

Suspended sediment

Coastal sediment was collect from a jetty off the Australian Institute of Marine Science (19°17′ S; 147°03′ E) from 3 m water depth. The sediment was placed into a 100 l tank and suspended by agitation, and the coarser grain fraction was allowed to settle for 1 h. The fine particles, still in suspension after 1 h, were then collected by siphoning directly from the top of the tank, and allowed to settle for a further 3 h. This sediment was then passed through a 63 μm mesh, keeping only the <63 μm fraction.

The suspended sediment treatments consisted of filtered seawater, to which 0, 25, 50, 100, 200 and 400 mg dry weight (DW) l−1 of suspended sediment solution was added. Final amounts of suspended sediment were calculated by determining the DW of a known volume of the stock solution. Twenty-nine water chemical and geological parameters were analysed for each of the sediment types used; these and the methods used for determination are listed in Table 2.
Table 2

The 29 chemical and geochemical parameters measured, and the analytical methods employed to characterise the suspended sediments




Grain size distribution (GSD)a

Laser diffraction

Master series X Malvern Particle Sampler (32 detector ranges); Detector lens = 1000 μm

Ash free dry weight (AFDW)b


Sediments dried at 100°C for 24 h, weighed, heated at 500°C for 1 h, and re-weighed.

Total organic carbon (TOC)c and dissolved organic carbon (DOC)c


Shimadzu TOC-5000 Carbon Analyser (Shimadzu Corporation, Kyoto, Japan)

Total nitrogen (TN)d


ANTEK Solid Auto Sampler (Antek Instruments, Inc., Houston, Texas, USA)

Chlorophyll a (Chl a) and phaeophytin (Phaeo)e


Turner Designs (Model 10-AU or TD700) Digital Fluorometer after 24 h extraction in acetone in dark.

Al, Ba, Ca, Cd, Co, Cu, Fe, Mg, Mn, Mo, Ni, Pb, Sn, Zn, V and Total phosphorous (TP)f


Varian Liberty 220 ICP Atomic Emission Spectrometer (ICP-AES)

Total inorganic nutrients (PO4, Si, NO2, NO3, NO2 + NO3)g


Segmented Flow Analysis—Bran+Luebbe AA3

Total suspended solids (TSS)c


Re-weighed filters after drying at 60°C until constant weight.

aWoolfe and Michibayashi (1995); b Parker (1983); c Furnas and Mitchell (1999); d Furnas et al. (1995); e Strickland and Parsons (1972); f Loring and Rantala (1992); g Ryle et al. (1981) and Ryle and Wellington (1982)


Salinity was manipulated by adding Super-Q water to filtered seawater, resulting in 36, 34, 32, 30 and 28 ppt salinity.

Dissolved inorganic nutrients

Two sources of dissolved inorganic nutrients were compared: a nitrate (potassium nitrate) and phosphate (dipotassium hydrogen phosphorus) treatment, and an ammonium (ammonium chloride) and phosphate (as above) treatment. Nutrients were added to filtered seawater at a nitrogen to phosphorus molar ratio of 5:1. The nutrient treatments consisted of a filtered seawater control and nominal concentrations of nitrate/phosphate and ammonium/phosphate of 1.25:0.25, 2.5:0.5, 5:1, 10:2 or 20:4 μM. Final concentrations of nutrients were confirmed as outlined in Table 2.

Experiment 2: interactions between suspended sediment, salinity and nutrients

The second experiment investigated interactions between the main effect treatments of Experiment 1. There were three nutrient treatments with nominal concentrations of 0:0, 5:1 and 10:2 μM nitrate and phosphate, three sediment treatments with nominal concentrations of 0, 50 and 100 mg DW l−1, and two salinity treatments (36 and 32 ppt). An extra replicate of each treatment was added to the experiment and filtered seawater added in place of eggs or sperm for later analysis of the various water quality parameters to confirm the nominal concentrations. A filtered seawater control and all possible interactions of the above treatments were investigated in five replicates of each. The experiment proceeded as described above.

Experiment 3: comparison of suspended sediment types

Five different types of sediments were collected 4 weeks prior to the spawning event. The upper 5 cm of sediment was collected from just below the water level at the estuarine shore of the Chester River (13°04′ S; 143°33′ E), a catchment in the far northern section of the GBR with minimal agriculture (Fabricius et al. 2005). The upper 5 cm of marine sediments was collected by SCUBA from 5 to 10 m depth from the leeward sides of the near-shore fringing reefs of High Island (17°10′ S, 146°00′ E), Wilkie Island (13°46′ S, 143°38′ E), and the lagoon of the offshore reef 14-077 (14°19′ S, 145°13′ E). The fifth sediment type was aragonite silt, a by-product of slicing coral skeletons of massive Porites sp. for growth band analyses (for details see Weber et al. 2006). All sediments were prepared as described above.

Treatments (each with five replicates) consisted of filtered seawater, with 0, 4, 16, 32, 64, 128, 256 and 512 mg DW l−1 suspended sediment solution from either one of the five stock solutions. A treatment with 1,024 mg DW l−1 was additionally tested, but samples were lost in two of the sediments; results of the successful treatments are included in the graphics but not in the statistical analyses. Sediment and water quality properties (29 parameters) were analysed as detailed in Table 2. To characterise the sediments, the sediment parameters were z-transformed, parameters were grouped into four categories, and z-transformed parameter values summed for each sediment type to form the following four indices: grain size (GSI), organic and nutrient related parameters (ONP), geochemical parameters (GCP), and dissolved nutrients (DNI). GSI was calculated as the sum of z-scores of the four parameters: mean grain size, and the 25, 50 and 75 percentiles of sediment volume. ONP was calculated as the sum of z-scores of the six parameters: chlorophyll a (Chl a) and phaeophytin (Phaeo) (an indicator of nutrient status; Brodie et al. 2007), ash-free dry weight (AFDW) (an indicator of organic matter), total organic carbon (TOC), total nitrogen (TN) and total phosphorous (TP). GCP was calculated as the sum of z-scores of fifteen metal and trace elements. DNI was calculated based on the six parameters: dissolved organic carbon (DOC), ammonium (NH4), nitrate (NO3), nitrite (NO2), silicate (Si) and phosphate (PO4).

Statistical analysis

Experiment 1

The data from the fertilisation and embryo development experiments were analysed using analysis of variance (ANOVA). One-factor ANOVAs were conducted to test the main effects of differing concentrations of suspended sediment and salinity, while a two-factor ANOVA was conducted to test for the effects of dissolved nutrients on fertilisation success and development of A. millepora embryos in isolation. Data were tested for deviation from homogeneity of variances and arcsine transformed where required. Post hoc comparisons of means for significant factors in the ANOVAs were done using Student-Newman Keuls (SNK) tests.

Experiment 2

To test for synergistic effects among the water quality parameters on the fertilisation success and development on A. millepora embryos, a three-factor ANOVA was used with suspended sediment (three levels), nutrients (three levels, fixed and orthogonal) and salinity (three levels, fixed and orthogonal) as the factors. Data were tested for deviation from homogeneity of variances and arcsine transformed where required.

Experiment 3

Analysis of variance (ANOVA) was used to test for differences in fertilisation and early development abnormalities between sediment type and concentration. Data were tested for deviation from homogeneity of variances and arcsine transformed where required. A Spearman non-parametric rank correlation test was used to test the correlation of ranked rates of fertilisation with the four sediment indices for the five sediments. The AIMS jetty sediment was not included in this analysis as gametes were exposed to different treatment concentrations.

All results were given as the mean ± standard error, and as not all the data required transformation all plots are of untransformed data to maintain consistency. Data analyses were conducted with Statistica 6.0 (StatSoft) and the statistical software package R (R Development Core Team 2008).


Experiment 1: response curves

The responses of gametes exposed to increasing sediments and nutrients, and decreasing salinity are shown in Fig. 1 and Table 3. The controls were characterised by high levels of fertilisation (87.1 ± 2.2% SE) and moderate rates of developmental abnormalities (20.1 ± 1.6%). Sediment significantly affected rates of fertilisation yet had no effect on successful embryo development (Table 3; Fig. 1a, b). Fertilisation declined to 75.6 ± 5.4% at 100 mg l−1 suspended sediments, and 35.5 ± 4.8% at 200 mg l−1 (Fig. 1a). Fertilisation was not affected by 36–32 ppt salinity, while it dropped to 33.6 ± 4.6% at 30 ppt, and no fertilisation was observed at 28 ppt (Table 3; Fig. 1c). Salinity of 32 ppt led to an increase in developmental abnormality of ~10%, while salinity of 30 ppt resulted in 100% developmental abnormality (Fig. 1d). Neither the nitrate/phosphate nor the ammonium/phosphate treatments significantly affected fertilisation or development, even at the highest nutrient concentrations (Table 3; Fig. 1e, f).
Fig. 1

Percentage of fertilisation and abnormal development in gametes of the coral Acropora millepora in response to exposure to various concentrations of suspended sediment (AIMS jetty), salinity and dissolved inorganic nutrients (Experiment 1). * Represents significant difference (< 0.05; Table 3)

Table 3

Effects of exposure to changes in salinity, suspended sediment, and dissolved inorganic nutrients on gamete fertilisation and early development of A. millepora (Experiment 1)






Pairwise multiple comparison, SNK


    Fertilisation (%)





0 = 25 = 50 > 100 > 200

    Abnormal development (%)







    Fertilisation (%)





28 < 30 < 32 = 34 = 36

    Abnormal development (%)





36 = 34 < 32 < 30

Nitrate and phosphate/Ammonium and phosphate (Fertilisation (%))







    Nutrient type






    Concentration × nutrient type






Nitrate and phosphate/Ammonium and phosphate (Abnormal (%))







    Nutrient type






    Concentration × nutrient type






Experiment 2: interactions between suspended sediment, salinity and nutrients

Fertilisation rates of gametes exposed simultaneously to combinations of sediments, salinity and nutrients are shown in Fig. 2. There was a significant interactive effect between sediments, salinity and nutrients on fertilisation (Table 4). While in Experiment 1, fertilisation was not affected by sediments at ≤50 mg l−1, salinity at ≥32 ppt or any of the nutrient treatments (Fig. 1 a, c, e), fertilisation was significantly reduced at these levels and higher when in combination (Fig. 2). At the highest nutrient concentration of 10:2 μM NO3:PO4 and salinity of 32 ppt, fertilisation was reduced at 100 mg l−1 sediments compared with treatments with 0 and 50 mg l−1. At 36 ppt salinity, there was no sediment effect at 0 and 50 mg l−1 at the lowest two nutrient concentrations, though when nutrients were increased to 10:2 μM NO3:PO4 there was a significant effect at all sediment concentrations (Fig. 2c).
Fig. 2

Percentage of fertilisation and abnormal development in gametes of the coral Acropora millepora in response to combined exposure to suspended sediment (AIMS jetty), salinity, and dissolved inorganic nutrients (Experiment 2). Line above bars represent that there is no significant difference between treatments, while * represents significant difference (P < 0.05; Table 4)

Table 4

Effects of combined exposure to 3 levels of suspended sediment, 2 levels of salinity, and 3 levels of dissolved inorganic nutrients on gamete fertilisation and early development of A. millepora (Experiment 2)






Fertilisation (%)
















    Sediment × nutrients





    Sediment × salinity





    Salinity × nutrients





    Sediment × salinity × nutrients








Abnormal development (%)
















    Sediment × nutrients





    Sediment × salinity





    Salinity × nutrients





    Sediment × salinity × nutrients









There were no interactive effects of salinity, sediment or nutrients on proportion of embryonic abnormalities.

Experiment 3: comparison of suspended sediment types

In the control treatments, the level of fertilisation averaged 71.0 ± 2.4%, and 24.5 ± 2.3% of embryos showed developmental abnormalities. Fertilisation was significantly reduced at the highest sediment levels for two of the five sediment types (Wilkie and High Islands; Fig. 3). Consequently, the analyses showed strong interactions between the effects of sediment type and sediment concentration on fertilisation success (Tables 5, 6).
Fig. 3

Percentage of fertilisation in gametes of the coral Acropora millepora in response to exposure to five types of suspended sediments (Experiment 3). * Represents significant difference (P < 0.05; Table 5)

Table 5

Effects of exposure to five types of suspended sediments on gamete fertilisation and early development of A. millepora (Experiment 3)






Fertilisation (%)

    Sediment type










    Sediment type × concentration









Abnormal development (%)

    Sediment type










    Sediment type × concentration








Table 6

Summary of post-hoc comparisons of mean rates of fertilisation and abnormal development in Experiment 3



Concentration (mg DW l−1)





512 < (0 = 4 = 16 = 32 = 64 = 128 = 256)






256 = 512 < (0 = 4 = 16 = 32 = 64 = 128)



0 = 4 < (16 = 32 = 64 = 128 = 256 = 512)


0 < (4 = 16 = 32 = 64 = 128 = 256 = 512)






512 = 0 < (4 = 16 = 32 = 64 = 128 = 256)

Sediment concentrations are presented in ascending order of percentage fertilisation or abnormality (Ns = no significant difference). Sediment types: CR, Chester River; HI, High Island; Ar, Aragonite; OS, Offshore; WI, Wilkie Island

Levels of abnormal development averaged 34% over all treatments, and showed weak and complex interactions between sediment types and amount (Tables 5, 6). The highest level of abnormal development (45.1 ± 3.3%) was observed in embryos exposed to Chester River sediment at 16 mg DW l−1. The lowest levels of abnormalities were found for the lowest concentrations of Wilkie Island sediments (22.2% and 20.8%, respectively).

The concentrations and derived indices of each of the five sediments, and of the AIMS jetty sediment from Experiment 1, are listed in Table 7. Median grain sizes of the silt-sized sediments ranged from 11 to 23 μm, with smallest grain size in the AIMS jetty sediment (Experiment 1) or High Island (Experiment 3) and highest for aragonite silt. The organic and nutrient-related parameters (ONP) were highest for Chester River sediment, and lowest for aragonite silt. The geochemical parameters were highest in the AIMS jetty and High Island sediment, and lowest in aragonite silt. The index characterising dissolved inorganic nutrients was highest in the two inshore sediments Wilkie and High Island, and lowest in the AIMS jetty and Chester River sediments.
Table 7

Results of the sediment and water quality properties measured to characterise each of the six sediments (means ± s.e.) used in Experiments 1–3, including Grain Size Index (GSI), Geochemical Parameters (GCP), Organic and Nutrient related Parameters (ONP) and Dissolved Nutrient Index (DNI)


AIMS Jetty

Chester river

High island

Wilkie island



Grain size parameters (PP)

    Mean grain size (μm)







    50% of sample volume = median of grain size distribution (GSD) (μm)







    25% of sample volume (GSD) (μm)







    75% of sample volume (GSD) (μm)







Organic and nutrient related parameters (ONP)

    AFDW [%]

13.0 ± 0.8

16.3 ± 0.4

11.9 ± 0.8

12.0 ± 0.3

10.2 ± 0.7

6.5 ± 0.6

    C/N ratio







    Chlorophyll a (μg g DW−1)

3.54 ± 0.32

11.12 ± 0.68

2.82 ± 0.42

3.89 ± 0.66

9.36 ± 0.58

0.55 ± 0.18

    Phaeophytin (μg g DW−1)

19.84 ± 0.68

37.54 ± 2.36

15.88 ± 0.64

19.87 ± 3.63

21.31 ± 1.50

1.98 ± 0.70

    TOC (mg g DW−1)

20.07 ± 1.19

50.15 ± 2.84

12.53 ± 0.25

13.16 ± 0.42

17.37 ± 1.12

2.78 ± 0.35

    TN (mg g DW−1)

1.77 ± 0.18

4.55 ± 0.54

1.91 ± 0.12

2.12 ± 0.22

4.04 ± 0.49

0.85 ± 0.26

    TP (μg kg DW−1)

4.83 ± 0.27

11.42 ± 0.41

5.58 ± 0.36

5.76 ± 0.28

14.39 ± 0.62

0.64 ± 0.18

Geochemical parameters (GCP)

    Ca (mmol g−1)

0.197 ± 0.003

0.267 ± 0.006

1.41 ± 0.034

1.86 ± 0.009

7.30 ± 0.207

10.1 ± 0.008

    Mg (mmol g−1)

0.759 ± 0.006

0.677 ± 0.011

0.615 ± 0.010

0.887 ± 0.011

0.757 ± 0.000

0.084 ± 0.000

    Al (mmol g−1)

2.39 ± 0.034

2.35 ± 0.039

2.28 ± 0.007

1.86 ± 0.058

0.287 ± 0.001

0.010 ± 0.000

    Fe (mmol g−1)

0.721 ± 0.006

0.489 ± 0.013

0.572 ± 0.022

0.464 ± 0.011

0.067 ± 0.002

0.004 ± 0.000

    Mn (μmol g−1)

8.90 ± 0.070

4.37 ± 0.012

8.94 ± 0.181

5.61 ± 0.068

0.760 ± 0.001

0.091 ± 0.001

    Ba (μmol g−1)

0.662 ± 0.011

0.660 ± 0.006

0.489 ± 0.008

0.508 ± 0.017

0.103 ± 0.002

0.111 ± 0.000

    Zn (μmol g−1)

1.133 ± 0.006

0.863 ± 0.005

0.989 ± 0.009

0.707 ± 0.006

0.130 ± 0.004

0.221 ± 0.004

    V (μmol g−1)

1.60 ± 0.055

0.97 ± 0.029

1.34 ± 0.015

1.08 ± 0.138



    Cu (μmol g−1)

0.346 ± 0.001

0.141 ± 0.001

0.235 ± 0.002

0.136 ± 0.005

0.038 ± 0.002

0.069 ± 0.001

    Co (μmol g−1)

0.196 ± 0.008

0.133 ± 0.001

0.171 ± 0.001

0.107 ± 0.007



    Pb (μmol g−1)

0.091 ± 0.001

0.115 ± 0.002

0.109 ± 0.010

0.083 ± 0.000

0.016 ± 0.000

0.010 ± 0.000

    Ni (μmol g−1)

0.343 ± 0.017

0.179 ± 0.004

0.469 ± 0.009

0.223 ± 0.013

0.131 ± 0.006

0.036 ± 0.006

    Cd (μmol g−1)

0.154 ± 0.011

0.117 ± 0.030

0.185 ± 0.066

0.082 ± 0.025

0.285 ± 0.027

0.190 ± 0.001

Dissolved nutrients (DNI)


1.16 ± 0.14

1.41 ± 0.05

1.21 ± 0.11

1.77 ± 0.22

1.47 ± 0.06

1.38 ± 0.06


1.27 ± 0.95

0.17 ± 0.03

0.41 ± 0.19

2.93 ± 2.71

0.23 ± 0.04

0.22 ± 0.04


5.60 ± 1.77

5.79 ± 2.74

8.43 ± 4.36

6.67 ± 2.87

7.06 ± 3.99

4.04 ± 3.99


0.66 ± 0.50

0.22 ± 0.01

0.24 ± 0.02

0.19 ± 0.00

1.85 ± 1.08

0.75 ± 0.37


0.30 ± 0.03

0.35 ± 0.07

0.46 ± 0.06

0.40 ± 0.02

0.40 ± 0.03

0.48 ± 0.03


1.01 ± 0.15

1.48 ± 0.14

2.23 ± 0.78

1.53 ± 0.25

1.16 ± 0.15

1.41 ± 0.15






























In order to investigate the role various sediment properties may play in determining their effects on coral reproduction, fertilisation rates exposed to 512 mg l−1 of the five sediment types were rank ordered (in increasing order) as follows: Wilkie Island sediments (49.9 ± 3.6%), followed by High Island sediment (58.2 ± 8.7%), offshore sediments (64.8 ± 1.0%), Chester River sediment (76.1 ± 3.5%) and aragonite silt (76.8 ± 4.3%). Chester River and aragonite silt were given the same rank order. The ranking of fertilisation rates was strongly related to the index characterising the dissolved nutrients in the sediment treatment (DNI, P = 0.005), with higher nutrient concentrations resulting in lower fertilisation rates (Table 8, Fig. 4). The apparent positive relationship of fertilisation rate to grain size was non-significant (GSD, P = 0.054). Fertilisation rates were also clearly unrelated to the geochemical and the organic and nutrient-related sediment parameters (P > 0.1).
Table 8

Spearman rank correlation analysis testing the relationship between the ranks of % fertilisation and the properties of sediments used in Experiment 3. Sediment properties are: the indices for sediment grain size (GSI), geochemical parameters (GCP), organic and nutrient related parameters (ONP) and dissolved nutrients (DNI)




















Fig. 4

Level of fertilisation in Acropora millepora (rank ordered) after exposure to five different sediment types characterised by indices for sediment grain size (GSI) and dissolved nutrients (DNI). The solid and dashed lines indicate the linear regression fit and 95% confidence intervals of the regression line, respectively


This study investigated the interactive effects of suspended sediments, salinity and dissolved inorganic nutrients on fertilisation success and embryonic development in a scleractinian coral. The results from this experiment confirm previous studies that have shown that suspended sediments, salinity and nutrients at environmentally relevant levels (see Table 1) affect the reproductive successes in corals; it furthermore demonstrates that these effects are interactive. Suspended sediments with different organic, nutritive and geophysical properties also differed in their effects on fertilisation and embryonic development.

Increased suspended sediments in the water column negatively affect the physiology of corals, including their rates of photosynthesis, growth, survival and energy expenditure (see reviews by Rogers (1990) and Fabricius (2005)). While mean suspended sediment concentrations are typically <5 mg l−1 (Rogers 1990), they exceed ~80 mg l−1 for 20–30 days per year due to wind resuspension around some GBR inshore reefs (Wolanski 1994; Wolanski et al. 2005). Wolanski et al. (2008) measured suspended sediment levels of 280 mg l−1 as a result of a flood plume during calm weather, and 500 mg l−1 due to a combination of flood plume and resuspension during a storm event. Here, levels of suspended sediment ≥50 mg l−1 inhibited fertilisation yet had no effect on early development, a finding that closely matches that of Gilmour (1999) who found that suspended sediment ≥50 mg l−1 inhibited fertilisation yet had no effect on larval development. Interestingly, Gilmour (1999) found no difference in fertilisation between the 50 and 100 mg l−1 treatments, whereas in the present study there was a continued decline in the fertilisation with increasing concentrations of suspended sediments: fertilisation dropped from 92% at 50 mg l−1 to 75% at 100 mg l−1 and 35% at 200 mg l−1. Such differences are likely to be attributable to the different coral species or sediment types used. Gilmour (1999) used Acropora digitifera and sourced sediment from spoil dredged from a large port that comprised grain sizes of ~50–200 μm, while the present study used fresh (presumably biologically active) coastal marine sediments with <63 μm grain size.

The effect of differences in sediment properties on coral fertilisation and early development was further investigated by exposing the gametes to various types of sediments with contrasting properties including grain size, organic and nutrient related parameters, geochemical properties and dissolved nutrients. A reduction in fertilisation was only found in sediments containing high dissolved nutrients and small sediment grain sizes. The AIMS Jetty sediment used in Experiment 1 appeared to reduce fertilisation more than any of the sediments used in Experiment 3; however, results were not strictly comparable as different concentrations were used in the two studies. Nevertheless it is noteworthy that the AIMS Jetty sediment had the lowest GSI of all sediments, strengthening the evidence for a potential correlation between GSI and fertilisation.

The mechanisms by which coral fertilisation could be impaired by suspended sediments are presently unknown. It is possible that suspended sediments may act as physical barrier between sperm and egg: suspended sediment may hinder, damage or adhere to sperm affecting its viability and movement hence reducing the number of egg–sperm contacts, or sediment particles may cover the micropyle blocking access to the sperm (Galbraith et al. 2006). Gilmour (1999) observed greater aggregation of eggs in treatments exposed to suspended sediment and suggested that this may result in fewer contacts between sperm and egg. These suggestions may help to explain the role of sediment presence in reducing fertilisation success, yet they fail to account for the interactive effects of dissolved nutrients. A number of studies have shown that sediment microorganisms rapidly recycle coral spawning products (Wild et al. 2004), and that sediment properties, including particle size, are responsible for binding nutrients (Pailles and Moody 1992) and harbouring microorganisms (Crump and Baross 1996). We speculate that microbial communities attached to suspended sediment particles might be one of the mechanisms responsible for low fertilisation in sediment-exposed coral gametes; however, this hypothesis requires further study.

The correlation between sediment nutrients and fertilisation rate shown in Experiment 3 have to be interpreted with caution, as the number of sediment variables is high compared with the number of sediments investigated, and some of the sediment parameters are highly correlated with each other. Nevertheless, the results agree with the findings of Experiment 2, showing that interactions between high nutrient concentrations and sedimentation negatively affect coral fertilisation rates.

Salinity is an important environmental factor for corals, as corals lack mechanisms for osmoregulation (Muthiga and Szmant 1987). Some inshore coral reefs of the GBR are exposed to reduced salinity from flood plumes almost annually (Devlin et al. 2001), yet only a relatively small proportion of these floods coincide with spawning. Heavy localised monsoonal rainfall can also occur during the coral mass spawning period, resulting in the formation of low salinity surface water layers. Anecdotal evidence by Harrison et al. (1984) suggested that the entire reproductive output of a coral reef flat in the GBR was destroyed when the mass spawning event coincided with heavy rainfall destroying all coral propagules on the surface, most probably due to reduced salinity.

Effects of reduced salinity on adult corals are well documented in the literature (e.g. Moberg et al. 1997; Alutoin et al. 2001; Kerswell and Jones 2003). However; there are fewer studies on the effects of reduced salinity on reproductive processes including fertilisation and larval development. This study demonstrated a significant reduction in fertilisation in response to a reduction in salinity to 30 ppt, while at 28 ppt no fertilisation of coral eggs occurred. These results are similar to those of Richmond (1993) who found that the rate of fertilisation dropped from 88% to 25% with a drop in salinity from 34 to 28 ppt, and from 58% to 34% with a drop in salinity from 35 to 31.5 ppt in corals from Guam and Okinawa, respectively. The present study also showed increased levels of developmental abnormalities at 30 ppt salinity treatment compared to 32 or 35 ppt, again confirming previous studies which also recorded a reduction in embryo viability and planulae survival in response to reductions in salinity (Richmond 1993; Vermeij et al. 2006). Increasing rates of abnormal development, in addition to reduction in fertilisation levels, can bring about a marked reduction in viable larvae and may have a profound impact on recruitment (Bassim et al. 2002).

Nutrient concentrations vary widely around inshore coral reefs of the GBR, with lowest concentrations during the dry season and orders of magnitude greater values in flood plumes (Table 1). This study showed that dissolved inorganic nutrients on their own did not affect rates of fertilisation or early larval development in A. millepora. This result contrasts with Harrison and Ward (2001) who found that fertilisation rates and development in the sympatric species Acropora longicyathus were significantly affected by ammonium, phosphate and ammonium/phosphate at levels similar to those investigated in the present study. In Goniastrea aspera exposed to the same levels of nutrients, fertilisation rates were affected at the highest treatment (50 μM) of ammonium plus phosphate, and most treatments adversely affected larval development (Harrison and Ward 2001). The sensitivity of coral fertilisation experiments is known to strongly depend on sperm density and gamete viability (Oliver and Babcock 1992; Marshall 2006), and it is possible that differences in the viability of different crosses may explain the different outcomes between the two sets of experiments. Additionally, the differences may also have been due to species-specific differences in sensitivities to elevated nutrients, as reviewed by Koop et al. (2001). Cox and Ward (2002) also showed different effects of increased ammonia on the reproduction in a broadcasting coral, Montipora capitata, and a brooding coral, Pocillopora damicornis. Planulation in P. damicornis ceased after 4 months of exposure to ammonium, while in M. capitata there was no change in fecundity or fertilisation success.

This study showed that there was a significant synergistic interaction between salinity, sediment and nutrients on fertilisation rates of A. millepora. This finding highlights the complex nature of the effects of changing water quality on coral ecology. Nutrients and low concentrations of sediments on their own had no effect on fertilisation rates yet when occurring in combination there was a significant reduction in fertilisation. Similarly, while slightly reduced salinity on its own had no effect, fertilisation was reduced when water with slightly reduced salinity carried elevated levels of sediments or nutrients. This interaction is particularly relevant when considering the changed nature of flood plumes: nutrient and sediment loads carried in flood plume waters into the Great Barrier Reef have increased around fivefold since onset of western agriculture, due to soil erosion from overgrazing, and increasing fertiliser application (Devlin et al. 2001; Furnas 2003; McCulloch et al. 2003). Thus, while exposure to low amounts of sediment-poor freshwater seems to reduce fertilisation success only in a minor way, it constitutes a major problem for coral fertilisation if that freshwater carries enhanced levels of dissolved inorganic nutrients and sediments, as often found in flood plumes from agriculturally modified catchments. The GBR lagoon, which covers an area of 30,000 km2, currently receives on average 66 km3 of freshwater, 14 to 28 million tonnes of sediment, and 43,000 and 1,300 to 22,000 tonnes of nitrogen and phosphorus, respectively, from the land per year (Furnas 2003). A significant proportion of these nutrients are associated with particulate matter (Verstraeten and Poesen 2000; Vaze and Chiew 2004), increasing the potential of synergistic detrimental effects on coral reproduction and on the resilience of nearshore reefs.

The early life history stages of coral have been shown to be extremely sensitive to changes in water quality (Ward and Harrison 1997; Negri et al. 2005; Markey et al. 2007), particularly fertilisation (Harrison and Ward 2001; Reichelt-Brushett and Harrison 2005). The finding that environmentally realistic changes in suspended sediment, salinity and dissolved inorganic nutrients can have a negative impact on fertilisation, and to a lesser extent on development, is clearly a reason for concern. Coral reefs around the world are under increasing threat from overfishing (Jackson et al. 2001), urban development (Hughes and Connell 1999), and climate change (Hoegh-Guldberg 1999; Hughes et al. 2003). An important aspect of the ability of coral reefs to withstand these ongoing disturbances is successful reproduction and recruitment. If recruitment is a limiting event in the life history of corals, then any reduction in fertilisation levels and additional increases in embryonic abnormalities will have profound consequences for the ability of coral reefs to recover from disturbances. This study therefore again confirms that the prevention of terrestrial runoff of nutrients and sediments through sustainable land management is an important management tool for reef conservation.


This study was supported by the Australian Institute of Marine Science, the Catchment-to-Reef Program of the Cooperative Research Centre of the Great Barrier Reef World Heritage Area, and the Marine and Tropical Sciences Research Facility (MTSRF), part of the Australian Government’s Commonwealth Environment Research Facilities programme. MW acknowledges the support through a PhD scholarship by the German Academic Exchange Service (DAAD) and the Max-Planck-Society, Germany. The authors would like to thank Andrew Negri and three anonymous reviewers for constructive comments on this manuscript.

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Authors and Affiliations

  • C. Humphrey
    • 1
  • M. Weber
    • 2
    • 3
  • C. Lott
    • 2
    • 3
  • T. Cooper
    • 1
  • K. Fabricius
    • 1
  1. 1.Australian Institute of Marine ScienceTownsvilleAustralia
  2. 2.Max Planck Institute for Marine MicrobiologyBremenGermany
  3. 3.HYDRA Institute for Marine SciencesCampo nell’ElbaItaly